RNA–Protein interactions for RNA: ENST00000421324.4

AC012560.1-202, humanhuman

TSL 1 (best) BASIC

Gene AC012560.1, Length 535 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012560.1-202ENST00000421324 SNX27Q96L92 541 aa8.23□□□□□ -1.09
AC012560.1-202ENST00000421324 PPP1R10Q96QC0 940 aaKnown RBP8.23□□□□□ -1.09
AC012560.1-202ENST00000421324 ACCSQ96QU6 501 aa8.23□□□□□ -1.09
AC012560.1-202ENST00000421324 TSPAN18Q96SJ8 248 aa8.23□□□□□ -1.09
AC012560.1-202ENST00000421324 FIZ1Q96SL8 496 aa8.23□□□□□ -1.09
AC012560.1-202ENST00000421324 POP1Q99575 1024 aaKnown RBP8.23□□□□□ -1.09
AC012560.1-202ENST00000421324 PAAF1Q9BRP4 392 aa8.23□□□□□ -1.09
AC012560.1-202ENST00000421324 TTPALQ9BTX7 342 aa8.23□□□□□ -1.09
AC012560.1-202ENST00000421324 MSTO1Q9BUK6 570 aa8.23□□□□□ -1.09
AC012560.1-202ENST00000421324 GPR62Q9BZJ7 368 aa8.23□□□□□ -1.09
AC012560.1-202ENST00000421324 SCAND2PQ9GZW5 306 aaPredicted RBP8.23□□□□□ -1.09
AC012560.1-202ENST00000421324 CXCL16Q9H2A7 254 aa8.23□□□□□ -1.09
AC012560.1-202ENST00000421324 RPF1Q9H9Y2 349 aaKnown RBP8.23□□□□□ -1.09
AC012560.1-202ENST00000421324 MAGEF1Q9HAY2 307 aa8.23□□□□□ -1.09
AC012560.1-202ENST00000421324 RXFP1Q9HBX9 757 aa8.23□□□□□ -1.09
AC012560.1-202ENST00000421324 CHST7Q9NS84 486 aa8.23□□□□□ -1.09
AC012560.1-202ENST00000421324 DZANK1Q9NVP4 752 aa8.23□□□□□ -1.09
AC012560.1-202ENST00000421324 KBTBD4Q9NVX7 518 aa8.23□□□□□ -1.09
AC012560.1-202ENST00000421324 NOP53Q9NZM5 478 aaKnown RBP8.23□□□□□ -1.09
AC012560.1-202ENST00000421324 CNTN3Q9P232 1028 aa8.23□□□□□ -1.09
AC012560.1-202ENST00000421324 ZDHHC9Q9Y397 364 aa8.23□□□□□ -1.09
AC012560.1-202ENST00000421324 HCFC2Q9Y5Z7 792 aa8.23□□□□□ -1.09
AC012560.1-202ENST00000421324 PLXNA4Q9HCM2 1894 aa8.23□□□□□ -1.09
AC012560.1-202ENST00000421324 CHD7Q9P2D1 2997 aa8.22□□□□□ -1.09
AC012560.1-202ENST00000421324 COL6A3P12111 3177 aa8.22□□□□□ -1.09
AC012560.1-202ENST00000421324 BRWD1Q9NSI6 2320 aa8.22□□□□□ -1.09
AC012560.1-202ENST00000421324 A0A0B4J269 797 aa8.22□□□□□ -1.09
AC012560.1-202ENST00000421324 TEX28O15482 410 aa8.22□□□□□ -1.09
AC012560.1-202ENST00000421324 XPOTO43592 962 aaKnown RBP8.22□□□□□ -1.09
AC012560.1-202ENST00000421324 KIF4AO95239 1232 aa8.22□□□□□ -1.09
AC012560.1-202ENST00000421324 EFEMP2O95967 443 aa8.22□□□□□ -1.09
AC012560.1-202ENST00000421324 EPCAMP16422 314 aa8.22□□□□□ -1.09
AC012560.1-202ENST00000421324 CLCNKBP51801 687 aa8.22□□□□□ -1.09
AC012560.1-202ENST00000421324 ASIC1P78348 528 aa8.22□□□□□ -1.09
AC012560.1-202ENST00000421324 NUCB2P80303 420 aa8.22□□□□□ -1.09
AC012560.1-202ENST00000421324 ITIH3Q06033 890 aa8.22□□□□□ -1.09
AC012560.1-202ENST00000421324 PPP2R3AQ06190 1150 aa8.22□□□□□ -1.09
AC012560.1-202ENST00000421324 UPP1Q16831 310 aa8.22□□□□□ -1.09
AC012560.1-202ENST00000421324 SLC10A6Q3KNW5 377 aa8.22□□□□□ -1.09
AC012560.1-202ENST00000421324 ATAT1Q5SQI0 421 aa8.22□□□□□ -1.09
AC012560.1-202ENST00000421324 ADHFE1Q8IWW8 467 aa8.22□□□□□ -1.09
AC012560.1-202ENST00000421324 CD302Q8IX05 232 aa8.22□□□□□ -1.09
AC012560.1-202ENST00000421324 RNF168Q8IYW5 571 aaPredicted RBP8.22□□□□□ -1.09
AC012560.1-202ENST00000421324 HASPINQ8TF76 798 aa8.22□□□□□ -1.09
AC012560.1-202ENST00000421324 SLC22A17Q8WUG5 538 aa8.22□□□□□ -1.09
AC012560.1-202ENST00000421324 LEO1Q8WVC0 666 aaPredicted RBP8.22□□□□□ -1.09
AC012560.1-202ENST00000421324 POMGNT1Q8WZA1 660 aa8.22□□□□□ -1.09
AC012560.1-202ENST00000421324 B3GALT6Q96L58 329 aa8.22□□□□□ -1.09
AC012560.1-202ENST00000421324 FBXL18Q96ME1 805 aa8.22□□□□□ -1.09
AC012560.1-202ENST00000421324 RIPOR3Q96MK2 946 aa8.22□□□□□ -1.09
AC012560.1-202ENST00000421324 SPOCK3Q9BQ16 436 aa8.22□□□□□ -1.09
AC012560.1-202ENST00000421324 MKNK1Q9BUB5 465 aa8.22□□□□□ -1.09
AC012560.1-202ENST00000421324 APOL5Q9BWW9 433 aa8.22□□□□□ -1.09
AC012560.1-202ENST00000421324 S1PR5Q9H228 398 aa8.22□□□□□ -1.09
AC012560.1-202ENST00000421324 ADAM7Q9H2U9 754 aa8.22□□□□□ -1.09
AC012560.1-202ENST00000421324 TMEM206Q9H813 350 aa8.22□□□□□ -1.09
AC012560.1-202ENST00000421324 OLFML3Q9NRN5 406 aa8.22□□□□□ -1.09
AC012560.1-202ENST00000421324 DNAJB12Q9NXW2 375 aaKnown RBP8.22□□□□□ -1.09
AC012560.1-202ENST00000421324 FNIP2Q9P278 1114 aa8.22□□□□□ -1.09
AC012560.1-202ENST00000421324 CACNG4Q9UBN1 327 aa8.22□□□□□ -1.09
AC012560.1-202ENST00000421324 AGO2Q9UKV8 859 aaKnown RBP8.22□□□□□ -1.09
AC012560.1-202ENST00000421324 KCNH3Q9ULD8 1083 aa8.22□□□□□ -1.09
AC012560.1-202ENST00000421324 SLC6A14Q9UN76 642 aa8.22□□□□□ -1.09
AC012560.1-202ENST00000421324 USP15Q9Y4E8 981 aaPredicted RBP8.22□□□□□ -1.09
AC012560.1-202ENST00000421324 NUB1Q9Y5A7 615 aa8.22□□□□□ -1.09
AC012560.1-202ENST00000421324 KCNMB2Q9Y691 235 aa8.22□□□□□ -1.09
AC012560.1-202ENST00000421324 TCF20Q9UGU0 1960 aaKnown RBP8.21□□□□□ -1.09
AC012560.1-202ENST00000421324 TTC26A0AVF1 554 aa8.21□□□□□ -1.1
AC012560.1-202ENST00000421324 FRMD3A2A2Y4 597 aa8.21□□□□□ -1.1
AC012560.1-202ENST00000421324 LACTBL1A8MY62 500 aa8.21□□□□□ -1.1
AC012560.1-202ENST00000421324 ANKRD63C9JTQ0 380 aa8.21□□□□□ -1.1
AC012560.1-202ENST00000421324 TMEM189-UBE2V1I3L0A0 370 aa8.21□□□□□ -1.1
AC012560.1-202ENST00000421324 PODXLO00592 558 aa8.21□□□□□ -1.1
AC012560.1-202ENST00000421324 LDHAP00338 332 aaKnown RBP8.21□□□□□ -1.1
AC012560.1-202ENST00000421324 GLUD1P00367 558 aa8.21□□□□□ -1.1
AC012560.1-202ENST00000421324 C1RP00736 705 aa8.21□□□□□ -1.1
AC012560.1-202ENST00000421324 SLFN14P0C7P3 912 aa8.21□□□□□ -1.1
AC012560.1-202ENST00000421324 CXCL8P10145 99 aa8.21□□□□□ -1.1
AC012560.1-202ENST00000421324 NID1P14543 1247 aa8.21□□□□□ -1.1
AC012560.1-202ENST00000421324 CMA1P23946 247 aa8.21□□□□□ -1.1
AC012560.1-202ENST00000421324 BRD2P25440 801 aaKnown RBP8.21□□□□□ -1.1
AC012560.1-202ENST00000421324 TARSP26639 723 aaKnown RBP8.21□□□□□ -1.1
AC012560.1-202ENST00000421324 TNFSF9P41273 254 aa8.21□□□□□ -1.1
AC012560.1-202ENST00000421324 MTHFRP42898 656 aa8.21□□□□□ -1.1
AC012560.1-202ENST00000421324 CLCN4P51793 760 aa8.21□□□□□ -1.1
AC012560.1-202ENST00000421324 CBX2Q14781 532 aaPredicted RBP8.21□□□□□ -1.1
AC012560.1-202ENST00000421324 NAA30Q147X3 362 aaPredicted RBP8.21□□□□□ -1.1
AC012560.1-202ENST00000421324 RARS2Q5T160 578 aaKnown RBP8.21□□□□□ -1.1
AC012560.1-202ENST00000421324 L1TD1Q5T7N2 865 aaKnown RBP8.21□□□□□ -1.1
AC012560.1-202ENST00000421324 CNNM4Q6P4Q7 775 aa8.21□□□□□ -1.1
AC012560.1-202ENST00000421324 SYCE2Q6PIF2 218 aa8.21□□□□□ -1.1
AC012560.1-202ENST00000421324 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.21□□□□□ -1.1
AC012560.1-202ENST00000421324 PALB2Q86YC2 1186 aa8.21□□□□□ -1.1
AC012560.1-202ENST00000421324 GLYCTKQ8IVS8 523 aa8.21□□□□□ -1.1
AC012560.1-202ENST00000421324 C12orf76Q8N812 135 aaPredicted RBP8.21□□□□□ -1.1
AC012560.1-202ENST00000421324 PIK3R5Q8WYR1 880 aa8.21□□□□□ -1.1
AC012560.1-202ENST00000421324 ZMAT2Q96NC0 199 aaKnown RBP8.21□□□□□ -1.1
AC012560.1-202ENST00000421324 NECTIN4Q96NY8 510 aa8.21□□□□□ -1.1
AC012560.1-202ENST00000421324 C7orf25Q9BPX7 421 aa8.21□□□□□ -1.1
AC012560.1-202ENST00000421324 PHF7Q9BWX1 381 aaPredicted RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms