RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 CSDE1O75534 798 aaKnown RBP11.26□□□□□ -0.61
PTCH1-206ENST00000421141 MAP3K7CLP57077 242 aa11.26□□□□□ -0.61
PTCH1-206ENST00000421141 DHX9Q08211 1270 aaKnown RBP11.26□□□□□ -0.61
PTCH1-206ENST00000421141 ATG16L1Q676U5 607 aa11.26□□□□□ -0.61
PTCH1-206ENST00000421141 APBB2Q92870 758 aa11.26□□□□□ -0.61
PTCH1-206ENST00000421141 DDX43Q9NXZ2 648 aaKnown RBP11.26□□□□□ -0.61
PTCH1-206ENST00000421141 EPS15L1Q9UBC2 864 aa11.26□□□□□ -0.61
PTCH1-206ENST00000421141 CLCA2Q9UQC9 943 aa11.26□□□□□ -0.61
PTCH1-206ENST00000421141 TAF6LQ9Y6J9 622 aa11.26□□□□□ -0.61
PTCH1-206ENST00000421141 COL1A2P08123 1366 aa11.26□□□□□ -0.61
PTCH1-206ENST00000421141 CXCL8P10145 99 aa11.26□□□□□ -0.61
PTCH1-206ENST00000421141 VDRP11473 427 aa11.26□□□□□ -0.61
PTCH1-206ENST00000421141 SDCCAG3Q96C92 435 aa11.26□□□□□ -0.61
PTCH1-206ENST00000421141 PKP3Q9Y446 797 aa11.26□□□□□ -0.61
PTCH1-206ENST00000421141 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.25□□□□□ -0.61
PTCH1-206ENST00000421141 F9P00740 461 aa11.25□□□□□ -0.61
PTCH1-206ENST00000421141 CHRNA3P32297 505 aa11.25□□□□□ -0.61
PTCH1-206ENST00000421141 OXCT1P55809 520 aa11.25□□□□□ -0.61
PTCH1-206ENST00000421141 CYP24A1Q07973 514 aa11.25□□□□□ -0.61
PTCH1-206ENST00000421141 ITGA7Q13683 1181 aa11.25□□□□□ -0.61
PTCH1-206ENST00000421141 ZPBP2Q6X784 338 aa11.25□□□□□ -0.61
PTCH1-206ENST00000421141 FAM71BQ8TC56 605 aa11.25□□□□□ -0.61
PTCH1-206ENST00000421141 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.25□□□□□ -0.61
PTCH1-206ENST00000421141 GPR63Q9BZJ6 419 aa11.25□□□□□ -0.61
PTCH1-206ENST00000421141 MED4Q9NPJ6 270 aa11.25□□□□□ -0.61
PTCH1-206ENST00000421141 TAF1P21675 1872 aa11.25□□□□□ -0.61
PTCH1-206ENST00000421141 UNCXA6NJT0 531 aa11.25□□□□□ -0.61
PTCH1-206ENST00000421141 ACSL3O95573 720 aa11.25□□□□□ -0.61
PTCH1-206ENST00000421141 MFN1Q8IWA4 741 aa11.25□□□□□ -0.61
PTCH1-206ENST00000421141 DDI1Q8WTU0 396 aa11.25□□□□□ -0.61
PTCH1-206ENST00000421141 KRT35Q92764 455 aa11.25□□□□□ -0.61
PTCH1-206ENST00000421141 METTL5Q9NRN9 209 aaKnown RBP11.25□□□□□ -0.61
PTCH1-206ENST00000421141 LIMA1Q9UHB6 759 aaKnown RBP11.25□□□□□ -0.61
PTCH1-206ENST00000421141 FIS1Q9Y3D6 152 aa11.25□□□□□ -0.61
PTCH1-206ENST00000421141 LRP6O75581 1613 aa11.25□□□□□ -0.61
PTCH1-206ENST00000421141 IFNL1Q8IU54 200 aa11.25□□□□□ -0.61
PTCH1-206ENST00000421141 GRID2IPA4D2P6 1211 aa11.25□□□□□ -0.61
PTCH1-206ENST00000421141 RARRES1P49788 294 aa11.25□□□□□ -0.61
PTCH1-206ENST00000421141 CCL23P55773 120 aa11.25□□□□□ -0.61
PTCH1-206ENST00000421141 IRX4P78413 519 aa11.25□□□□□ -0.61
PTCH1-206ENST00000421141 PHEXP78562 749 aa11.25□□□□□ -0.61
PTCH1-206ENST00000421141 SLC35G2Q8TBE7 412 aa11.25□□□□□ -0.61
PTCH1-206ENST00000421141 KCNB2Q92953 911 aa11.25□□□□□ -0.61
PTCH1-206ENST00000421141 CABS1Q96KC9 395 aa11.25□□□□□ -0.61
PTCH1-206ENST00000421141 CFAP99D6REC4 459 aa11.25□□□□□ -0.61
PTCH1-206ENST00000421141 MMP3P08254 477 aa11.25□□□□□ -0.61
PTCH1-206ENST00000421141 KLHL38Q2WGJ6 581 aa11.25□□□□□ -0.61
PTCH1-206ENST00000421141 ARMC6Q6NXE6 501 aa11.25□□□□□ -0.61
PTCH1-206ENST00000421141 TRIM48Q8IWZ4 208 aa11.25□□□□□ -0.61
PTCH1-206ENST00000421141 CYP2W1Q8TAV3 490 aa11.25□□□□□ -0.61
PTCH1-206ENST00000421141 HAUS8Q9BT25 410 aa11.25□□□□□ -0.61
PTCH1-206ENST00000421141 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.25□□□□□ -0.61
PTCH1-206ENST00000421141 TTC7AQ9ULT0 858 aaPredicted RBP11.25□□□□□ -0.61
PTCH1-206ENST00000421141 M0QYT0 321 aa11.25□□□□□ -0.61
PTCH1-206ENST00000421141 FZD9O00144 591 aa11.25□□□□□ -0.61
PTCH1-206ENST00000421141 SZRD1Q7Z422 152 aa11.25□□□□□ -0.61
PTCH1-206ENST00000421141 CACNA2D3Q8IZS8 1091 aa11.25□□□□□ -0.61
PTCH1-206ENST00000421141 SKA1Q96BD8 255 aa11.25□□□□□ -0.61
PTCH1-206ENST00000421141 SNF8Q96H20 258 aa11.25□□□□□ -0.61
PTCH1-206ENST00000421141 ASB7Q9H672 318 aa11.25□□□□□ -0.61
PTCH1-206ENST00000421141 OLFML3Q9NRN5 406 aa11.25□□□□□ -0.61
PTCH1-206ENST00000421141 ARHGAP25P42331 645 aa11.24□□□□□ -0.61
PTCH1-206ENST00000421141 ADCY2Q08462 1091 aa11.24□□□□□ -0.61
PTCH1-206ENST00000421141 PABPC1LQ4VXU2 614 aaKnown RBP11.24□□□□□ -0.61
PTCH1-206ENST00000421141 CYFIP2Q96F07 1278 aa11.24□□□□□ -0.61
PTCH1-206ENST00000421141 ELOVL4Q9GZR5 314 aa11.24□□□□□ -0.61
PTCH1-206ENST00000421141 VCX3BQ9H321 246 aa11.24□□□□□ -0.61
PTCH1-206ENST00000421141 GEMIN4P57678 1058 aaKnown RBP11.24□□□□□ -0.61
PTCH1-206ENST00000421141 C6orf118Q5T5N4 469 aa11.24□□□□□ -0.61
PTCH1-206ENST00000421141 KDELC2Q7Z4H8 507 aa11.24□□□□□ -0.61
PTCH1-206ENST00000421141 MIB1Q86YT6 1006 aa11.24□□□□□ -0.61
PTCH1-206ENST00000421141 CARNMT1Q8N4J0 409 aa11.24□□□□□ -0.61
PTCH1-206ENST00000421141 TRAPPC12Q8WVT3 735 aa11.24□□□□□ -0.61
PTCH1-206ENST00000421141 PORCNQ9H237 461 aa11.24□□□□□ -0.61
PTCH1-206ENST00000421141 INTS9Q9NV88 658 aaKnown RBP11.24□□□□□ -0.61
PTCH1-206ENST00000421141 AFF4Q9UHB7 1163 aaKnown RBP11.24□□□□□ -0.61
PTCH1-206ENST00000421141 BARX2Q9UMQ3 279 aaPredicted RBP11.24□□□□□ -0.61
PTCH1-206ENST00000421141 ITIH6Q6UXX5 1313 aa11.24□□□□□ -0.61
PTCH1-206ENST00000421141 PRR23AA6NEV1 266 aa11.24□□□□□ -0.61
PTCH1-206ENST00000421141 APRTP07741 180 aa11.24□□□□□ -0.61
PTCH1-206ENST00000421141 PAX3P23760 479 aa11.24□□□□□ -0.61
PTCH1-206ENST00000421141 TBC1D1Q86TI0 1168 aaPredicted RBP11.24□□□□□ -0.61
PTCH1-206ENST00000421141 XPO6Q96QU8 1125 aaKnown RBP11.24□□□□□ -0.61
PTCH1-206ENST00000421141 SCUBE2Q9NQ36 999 aa11.24□□□□□ -0.61
PTCH1-206ENST00000421141 CCDC160A6NGH7 325 aa11.24□□□□□ -0.61
PTCH1-206ENST00000421141 COPS2P61201 443 aa11.24□□□□□ -0.61
PTCH1-206ENST00000421141 STARD3Q14849 445 aa11.24□□□□□ -0.61
PTCH1-206ENST00000421141 PKN1Q16512 942 aa11.24□□□□□ -0.61
PTCH1-206ENST00000421141 CCDC137Q6PK04 289 aaKnown RBP11.24□□□□□ -0.61
PTCH1-206ENST00000421141 RIN2Q8WYP3 895 aaPredicted RBP11.24□□□□□ -0.61
PTCH1-206ENST00000421141 TMEM176AQ96HP8 235 aa11.24□□□□□ -0.61
PTCH1-206ENST00000421141 SPATA31C2B4DYI2 1134 aa11.24□□□□□ -0.61
PTCH1-206ENST00000421141 FOXP2O15409 715 aa11.24□□□□□ -0.61
PTCH1-206ENST00000421141 ZW10O43264 779 aa11.24□□□□□ -0.61
PTCH1-206ENST00000421141 SMIM24O75264 130 aa11.24□□□□□ -0.61
PTCH1-206ENST00000421141 NDUFS3O75489 264 aa11.24□□□□□ -0.61
PTCH1-206ENST00000421141 VCLP18206 1134 aa11.24□□□□□ -0.61
PTCH1-206ENST00000421141 ARHGEF26Q96DR7 871 aa11.24□□□□□ -0.61
PTCH1-206ENST00000421141 LRGUKQ96M69 825 aa11.24□□□□□ -0.61
PTCH1-206ENST00000421141 OSBPL9Q96SU4 736 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms