RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 CYB561D2O14569 222 aa18.23■□□□□ 0.51
UPF3AP3-201ENST00000420996 MCM2P49736 904 aa18.23■□□□□ 0.51
UPF3AP3-201ENST00000420996 GTF2BQ00403 316 aa18.23■□□□□ 0.51
UPF3AP3-201ENST00000420996 TAF12Q16514 161 aa18.23■□□□□ 0.51
UPF3AP3-201ENST00000420996 THEM5Q8N1Q8 247 aa18.23■□□□□ 0.51
UPF3AP3-201ENST00000420996 SPPL2BQ8TCT7 592 aa18.23■□□□□ 0.51
UPF3AP3-201ENST00000420996 LRRC15Q8TF66 581 aa18.23■□□□□ 0.51
UPF3AP3-201ENST00000420996 FIZ1Q96SL8 496 aa18.23■□□□□ 0.51
UPF3AP3-201ENST00000420996 GKN1Q9NS71 199 aa18.23■□□□□ 0.51
UPF3AP3-201ENST00000420996 GREB1Q4ZG55 1949 aa18.23■□□□□ 0.51
UPF3AP3-201ENST00000420996 TPRP12270 2363 aaKnown RBP18.23■□□□□ 0.51
UPF3AP3-201ENST00000420996 ANKRD63C9JTQ0 380 aa18.22■□□□□ 0.51
UPF3AP3-201ENST00000420996 H3BQV1 296 aa18.22■□□□□ 0.51
UPF3AP3-201ENST00000420996 KRT37O76014 449 aa18.22■□□□□ 0.51
UPF3AP3-201ENST00000420996 KRT18P05783 430 aaKnown RBP18.22■□□□□ 0.51
UPF3AP3-201ENST00000420996 HAPLN1P10915 354 aaPredicted RBP18.22■□□□□ 0.51
UPF3AP3-201ENST00000420996 ACOT2P49753 483 aa18.22■□□□□ 0.51
UPF3AP3-201ENST00000420996 TAF6P49848 677 aa18.22■□□□□ 0.51
UPF3AP3-201ENST00000420996 POU5F1Q01860 360 aaKnown RBP18.22■□□□□ 0.51
UPF3AP3-201ENST00000420996 MCM6Q14566 821 aa18.22■□□□□ 0.51
UPF3AP3-201ENST00000420996 SLFN12LQ6IEE8 588 aa18.22■□□□□ 0.51
UPF3AP3-201ENST00000420996 LRRTM3Q86VH5 581 aa18.22■□□□□ 0.51
UPF3AP3-201ENST00000420996 CMTM8Q8IZV2 173 aa18.22■□□□□ 0.51
UPF3AP3-201ENST00000420996 GIPC2Q8TF65 315 aa18.22■□□□□ 0.51
UPF3AP3-201ENST00000420996 PYM1Q9BRP8 204 aaKnown RBP18.22■□□□□ 0.51
UPF3AP3-201ENST00000420996 CCSER1Q9C0I3 900 aa18.22■□□□□ 0.51
UPF3AP3-201ENST00000420996 ZHX3Q9H4I2 956 aa18.22■□□□□ 0.51
UPF3AP3-201ENST00000420996 DPP3Q9NY33 737 aa18.22■□□□□ 0.51
UPF3AP3-201ENST00000420996 CCDC163A0A0D9SF12 145 aa18.21■□□□□ 0.51
UPF3AP3-201ENST00000420996 EXTL3O43909 919 aa18.21■□□□□ 0.51
UPF3AP3-201ENST00000420996 GDF9O60383 454 aa18.21■□□□□ 0.51
UPF3AP3-201ENST00000420996 NMT1P30419 496 aaKnown RBP18.21■□□□□ 0.51
UPF3AP3-201ENST00000420996 HOXC13P31276 330 aa18.21■□□□□ 0.51
UPF3AP3-201ENST00000420996 CDR1P51861 262 aa18.21■□□□□ 0.51
UPF3AP3-201ENST00000420996 WSCD1Q658N2 575 aa18.21■□□□□ 0.51
UPF3AP3-201ENST00000420996 ADALQ6DHV7 355 aa18.21■□□□□ 0.51
UPF3AP3-201ENST00000420996 DDX1Q92499 740 aaKnown RBP18.21■□□□□ 0.51
UPF3AP3-201ENST00000420996 RAD54LQ92698 747 aa18.21■□□□□ 0.51
UPF3AP3-201ENST00000420996 LOXL4Q96JB6 756 aa18.21■□□□□ 0.51
UPF3AP3-201ENST00000420996 FAM83CQ9BQN1 747 aa18.21■□□□□ 0.51
UPF3AP3-201ENST00000420996 SMG9Q9H0W8 520 aaKnown RBP18.21■□□□□ 0.51
UPF3AP3-201ENST00000420996 AGO2Q9UKV8 859 aaKnown RBP18.21■□□□□ 0.51
UPF3AP3-201ENST00000420996 STYXL1Q9Y6J8 313 aa18.21■□□□□ 0.51
UPF3AP3-201ENST00000420996 SPAG17Q6Q759 2223 aa18.21■□□□□ 0.5
UPF3AP3-201ENST00000420996 ATG13O75143 517 aa18.2■□□□□ 0.5
UPF3AP3-201ENST00000420996 TBCAO75347 108 aaKnown RBP18.2■□□□□ 0.5
UPF3AP3-201ENST00000420996 F11P03951 625 aa18.2■□□□□ 0.5
UPF3AP3-201ENST00000420996 PLCG1P19174 1290 aa18.2■□□□□ 0.5
UPF3AP3-201ENST00000420996 DDX6P26196 483 aaKnown RBP eCLIP18.2■□□□□ 0.5
UPF3AP3-201ENST00000420996 GJB2P29033 226 aa18.2■□□□□ 0.5
UPF3AP3-201ENST00000420996 NLRP12P59046 1061 aa18.2■□□□□ 0.5
UPF3AP3-201ENST00000420996 GRSF1Q12849 480 aaKnown RBP eCLIP18.2■□□□□ 0.5
UPF3AP3-201ENST00000420996 RUNX3Q13761 415 aa18.2■□□□□ 0.5
UPF3AP3-201ENST00000420996 ZC2HC1CQ53FD0 456 aaPredicted RBP18.2■□□□□ 0.5
UPF3AP3-201ENST00000420996 TMEM196Q5HYL7 178 aa18.2■□□□□ 0.5
UPF3AP3-201ENST00000420996 TMEM150AQ86TG1 271 aa18.2■□□□□ 0.5
UPF3AP3-201ENST00000420996 DCP1BQ8IZD4 617 aaKnown RBP18.2■□□□□ 0.5
UPF3AP3-201ENST00000420996 GAB3Q8WWW8 586 aa18.2■□□□□ 0.5
UPF3AP3-201ENST00000420996 ST6GALNAC4Q9H4F1 302 aa18.2■□□□□ 0.5
UPF3AP3-201ENST00000420996 ABI2Q9NYB9 513 aaPredicted RBP18.2■□□□□ 0.5
UPF3AP3-201ENST00000420996 OBSL1O75147 1896 aa18.2■□□□□ 0.5
UPF3AP3-201ENST00000420996 SOBPA7XYQ1 873 aa18.19■□□□□ 0.5
UPF3AP3-201ENST00000420996 KPNA7A9QM74 516 aa18.19■□□□□ 0.5
UPF3AP3-201ENST00000420996 TISP43B9A030 160 aa18.19■□□□□ 0.5
UPF3AP3-201ENST00000420996 ACACBO00763 2458 aa18.19■□□□□ 0.5
UPF3AP3-201ENST00000420996 TRDMT1O14717 391 aaKnown RBP18.19■□□□□ 0.5
UPF3AP3-201ENST00000420996 BMP15O95972 392 aa18.19■□□□□ 0.5
UPF3AP3-201ENST00000420996 HMGA1P17096 107 aaKnown RBP18.19■□□□□ 0.5
UPF3AP3-201ENST00000420996 LONP1P36776 959 aaKnown RBP18.19■□□□□ 0.5
UPF3AP3-201ENST00000420996 AVPR1AP37288 418 aa18.19■□□□□ 0.5
UPF3AP3-201ENST00000420996 KARSQ15046 597 aaKnown RBP18.19■□□□□ 0.5
UPF3AP3-201ENST00000420996 RABEP1Q15276 862 aa18.19■□□□□ 0.5
UPF3AP3-201ENST00000420996 SV2CQ496J9 727 aa18.19■□□□□ 0.5
UPF3AP3-201ENST00000420996 FSTL4Q6MZW2 842 aa18.19■□□□□ 0.5
UPF3AP3-201ENST00000420996 PKN3Q6P5Z2 889 aa18.19■□□□□ 0.5
UPF3AP3-201ENST00000420996 CACNA2D4Q7Z3S7 1137 aa18.19■□□□□ 0.5
UPF3AP3-201ENST00000420996 MAB21L3Q8N8X9 362 aa18.19■□□□□ 0.5
UPF3AP3-201ENST00000420996 RASSF8Q8NHQ8 419 aa18.19■□□□□ 0.5
UPF3AP3-201ENST00000420996 USP13Q92995 863 aaPredicted RBP18.19■□□□□ 0.5
UPF3AP3-201ENST00000420996 HPS4Q9NQG7 708 aa18.19■□□□□ 0.5
UPF3AP3-201ENST00000420996 TDP1Q9NUW8 608 aa18.19■□□□□ 0.5
UPF3AP3-201ENST00000420996 PCDHB5Q9Y5E4 795 aa18.19■□□□□ 0.5
UPF3AP3-201ENST00000420996 ATG2BQ96BY7 2078 aa18.19■□□□□ 0.5
UPF3AP3-201ENST00000420996 KMT2BQ9UMN6 2715 aaPredicted RBP18.18■□□□□ 0.5
UPF3AP3-201ENST00000420996 EPG5Q9HCE0 2579 aa18.18■□□□□ 0.5
UPF3AP3-201ENST00000420996 AXIN1O15169 862 aa18.18■□□□□ 0.5
UPF3AP3-201ENST00000420996 RPP40O75818 363 aaKnown RBP18.18■□□□□ 0.5
UPF3AP3-201ENST00000420996 IL18RAPO95256 599 aa18.18■□□□□ 0.5
UPF3AP3-201ENST00000420996 ZNF806P0C7X5 589 aa18.18■□□□□ 0.5
UPF3AP3-201ENST00000420996 RAP1GAPP47736 663 aa18.18■□□□□ 0.5
UPF3AP3-201ENST00000420996 LIMK1P53667 647 aa18.18■□□□□ 0.5
UPF3AP3-201ENST00000420996 AMPD2Q01433 879 aa18.18■□□□□ 0.5
UPF3AP3-201ENST00000420996 BFSP1Q12934 665 aa18.18■□□□□ 0.5
UPF3AP3-201ENST00000420996 CRELD2Q6UXH1 353 aaPredicted RBP18.18■□□□□ 0.5
UPF3AP3-201ENST00000420996 NT5DC4Q86YG4 428 aa18.18■□□□□ 0.5
UPF3AP3-201ENST00000420996 EFCAB13Q8IY85 973 aa18.18■□□□□ 0.5
UPF3AP3-201ENST00000420996 LARP4BQ92615 738 aaKnown RBP18.18■□□□□ 0.5
UPF3AP3-201ENST00000420996 TMX3Q96JJ7 454 aa18.18■□□□□ 0.5
UPF3AP3-201ENST00000420996 ZNF560Q96MR9 790 aa18.18■□□□□ 0.5
UPF3AP3-201ENST00000420996 ARRDC1-AS1Q9H2J1 176 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms