RNA–Protein interactions for RNA: ENST00000418981.1

HLA-U-204, Transcript of major histocompatibility complex, class I, U (pseudogene), humanhuman

BASIC

Gene HLA-U, Length 186 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-U-204ENST00000418981 TNIP3Q96KP6 325 aa13.2□□□□□ -0.3
HLA-U-204ENST00000418981 LMBRD1Q9NUN5 540 aa13.2□□□□□ -0.3
HLA-U-204ENST00000418981 DDX43Q9NXZ2 648 aaKnown RBP13.2□□□□□ -0.3
HLA-U-204ENST00000418981 ARMCX3Q9UH62 379 aaPredicted RBP13.2□□□□□ -0.3
HLA-U-204ENST00000418981 MAPK8IP1Q9UQF2 711 aa13.2□□□□□ -0.3
HLA-U-204ENST00000418981 TIMM13Q9Y5L4 95 aaPredicted RBP13.2□□□□□ -0.3
HLA-U-204ENST00000418981 TRIP11Q15643 1979 aa13.2□□□□□ -0.3
HLA-U-204ENST00000418981 PPP1R3GB7ZBB8 358 aa13.19□□□□□ -0.3
HLA-U-204ENST00000418981 CST3P01034 146 aaPredicted RBP13.19□□□□□ -0.3
HLA-U-204ENST00000418981 SPATA31D3P0C874 917 aa13.19□□□□□ -0.3
HLA-U-204ENST00000418981 ERCC5P28715 1186 aaPredicted RBP13.19□□□□□ -0.3
HLA-U-204ENST00000418981 WEE1P30291 646 aa13.19□□□□□ -0.3
HLA-U-204ENST00000418981 ARPP19P56211 112 aa13.19□□□□□ -0.3
HLA-U-204ENST00000418981 PABPC1LQ4VXU2 614 aaKnown RBP13.19□□□□□ -0.3
HLA-U-204ENST00000418981 ANKRD40Q6AI12 368 aa13.19□□□□□ -0.3
HLA-U-204ENST00000418981 TTI2Q6NXR4 508 aa13.19□□□□□ -0.3
HLA-U-204ENST00000418981 RNF19BQ6ZMZ0 732 aa13.19□□□□□ -0.3
HLA-U-204ENST00000418981 SPATA31D4Q6ZUB0 917 aa13.19□□□□□ -0.3
HLA-U-204ENST00000418981 MTSS1LQ765P7 747 aa13.19□□□□□ -0.3
HLA-U-204ENST00000418981 RNF135Q8IUD6 432 aa13.19□□□□□ -0.3
HLA-U-204ENST00000418981 OR10T2Q8NGX3 314 aa13.19□□□□□ -0.3
HLA-U-204ENST00000418981 PSMG2Q969U7 264 aa13.19□□□□□ -0.3
HLA-U-204ENST00000418981 E2F7Q96AV8 911 aa13.19□□□□□ -0.3
HLA-U-204ENST00000418981 RPGRIP1Q96KN7 1286 aa13.19□□□□□ -0.3
HLA-U-204ENST00000418981 MMS19Q96T76 1030 aa13.19□□□□□ -0.3
HLA-U-204ENST00000418981 RTP3Q9BQQ7 232 aa13.19□□□□□ -0.3
HLA-U-204ENST00000418981 NUP62CLQ9H1M0 184 aa13.19□□□□□ -0.3
HLA-U-204ENST00000418981 SNX25Q9H3E2 840 aa13.19□□□□□ -0.3
HLA-U-204ENST00000418981 RWDD2AQ9UIY3 292 aa13.19□□□□□ -0.3
HLA-U-204ENST00000418981 CDH7Q9ULB5 785 aa13.19□□□□□ -0.3
HLA-U-204ENST00000418981 COQ4Q9Y3A0 265 aa13.19□□□□□ -0.3
HLA-U-204ENST00000418981 YIPF1Q9Y548 306 aa13.19□□□□□ -0.3
HLA-U-204ENST00000418981 UNC80Q8N2C7 3258 aa13.19□□□□□ -0.3
HLA-U-204ENST00000418981 HAPLN1P10915 354 aaPredicted RBP13.18□□□□□ -0.3
HLA-U-204ENST00000418981 LAMP2P13473 410 aa13.18□□□□□ -0.3
HLA-U-204ENST00000418981 PFKLP17858 780 aa13.18□□□□□ -0.3
HLA-U-204ENST00000418981 GNL1P36915 607 aaPredicted RBP13.18□□□□□ -0.3
HLA-U-204ENST00000418981 MXI1P50539 228 aa13.18□□□□□ -0.3
HLA-U-204ENST00000418981 MYL6P60660 151 aa13.18□□□□□ -0.3
HLA-U-204ENST00000418981 PTPN21Q16825 1174 aa13.18□□□□□ -0.3
HLA-U-204ENST00000418981 SLC39A12Q504Y0 691 aa13.18□□□□□ -0.3
HLA-U-204ENST00000418981 LMBRD2Q68DH5 695 aaPredicted RBP13.18□□□□□ -0.3
HLA-U-204ENST00000418981 SMYD4Q8IYR2 804 aaPredicted RBP13.18□□□□□ -0.3
HLA-U-204ENST00000418981 FBXL13Q8NEE6 735 aa13.18□□□□□ -0.3
HLA-U-204ENST00000418981 PLEKHO2Q8TD55 490 aa13.18□□□□□ -0.3
HLA-U-204ENST00000418981 NELFBQ8WX92 580 aa13.18□□□□□ -0.3
HLA-U-204ENST00000418981 ASAH2Q9NR71 780 aa13.18□□□□□ -0.3
HLA-U-204ENST00000418981 UXTQ9UBK9 157 aaPredicted RBP13.18□□□□□ -0.3
HLA-U-204ENST00000418981 SORCS3Q9UPU3 1222 aa13.18□□□□□ -0.3
HLA-U-204ENST00000418981 ATP8B3O60423 1300 aa13.17□□□□□ -0.3
HLA-U-204ENST00000418981 C2CD4DB7Z1M9 353 aa13.17□□□□□ -0.3
HLA-U-204ENST00000418981 CCL16O15467 120 aa13.17□□□□□ -0.3
HLA-U-204ENST00000418981 GPR37L1O60883 481 aa13.17□□□□□ -0.3
HLA-U-204ENST00000418981 SEC24AO95486 1093 aa13.17□□□□□ -0.3
HLA-U-204ENST00000418981 RHOP08100 348 aa13.17□□□□□ -0.3
HLA-U-204ENST00000418981 CSH1P0DML2 217 aa13.17□□□□□ -0.3
HLA-U-204ENST00000418981 CSH2P0DML3 217 aa13.17□□□□□ -0.3
HLA-U-204ENST00000418981 CCDC192P0DO97 292 aa13.17□□□□□ -0.3
HLA-U-204ENST00000418981 DDX6P26196 483 aaKnown RBP eCLIP13.17□□□□□ -0.3
HLA-U-204ENST00000418981 CDC25CP30307 473 aa13.17□□□□□ -0.3
HLA-U-204ENST00000418981 PPP3CCP48454 512 aa13.17□□□□□ -0.3
HLA-U-204ENST00000418981 YWHAEP62258 255 aaKnown RBP13.17□□□□□ -0.3
HLA-U-204ENST00000418981 TWF1Q12792 350 aa13.17□□□□□ -0.3
HLA-U-204ENST00000418981 DUSP4Q13115 394 aa13.17□□□□□ -0.3
HLA-U-204ENST00000418981 MTMR3Q13615 1198 aa13.17□□□□□ -0.3
HLA-U-204ENST00000418981 WDR44Q5JSH3 913 aa13.17□□□□□ -0.3
HLA-U-204ENST00000418981 C1orf220Q5T0J3 134 aa13.17□□□□□ -0.3
HLA-U-204ENST00000418981 PDZD4Q76G19 769 aaPredicted RBP13.17□□□□□ -0.3
HLA-U-204ENST00000418981 GRASPQ7Z6J2 395 aaPredicted RBP13.17□□□□□ -0.3
HLA-U-204ENST00000418981 SPATA2LQ8IUW3 424 aaPredicted RBP13.17□□□□□ -0.3
HLA-U-204ENST00000418981 MYCBPAPQ8TBZ2 947 aa13.17□□□□□ -0.3
HLA-U-204ENST00000418981 KBTBD7Q8WVZ9 684 aa13.17□□□□□ -0.3
HLA-U-204ENST00000418981 EDAQ92838 391 aa13.17□□□□□ -0.3
HLA-U-204ENST00000418981 SPATA17Q96L03 361 aa13.17□□□□□ -0.3
HLA-U-204ENST00000418981 FAM81BQ96LP2 452 aa13.17□□□□□ -0.3
HLA-U-204ENST00000418981 PKMYT1Q99640 499 aa13.17□□□□□ -0.3
HLA-U-204ENST00000418981 SYT15Q9BQS2 421 aa13.17□□□□□ -0.3
HLA-U-204ENST00000418981 APOL5Q9BWW9 433 aa13.17□□□□□ -0.3
HLA-U-204ENST00000418981 TSHZ2Q9NRE2 1034 aa13.17□□□□□ -0.3
HLA-U-204ENST00000418981 DNMT3BQ9UBC3 853 aaKnown RBP13.17□□□□□ -0.3
HLA-U-204ENST00000418981 MRPS23Q9Y3D9 190 aaKnown RBP13.17□□□□□ -0.3
HLA-U-204ENST00000418981 VWA8A3KMH1 1905 aa13.17□□□□□ -0.3
HLA-U-204ENST00000418981 ANHXE9PGG2 379 aa13.16□□□□□ -0.3
HLA-U-204ENST00000418981 TRIM66O15016 1216 aa13.16□□□□□ -0.3
HLA-U-204ENST00000418981 VNN1O95497 513 aa13.16□□□□□ -0.3
HLA-U-204ENST00000418981 HLA-DRAP01903 254 aa13.16□□□□□ -0.3
HLA-U-204ENST00000418981 BMP6P22004 513 aa13.16□□□□□ -0.3
HLA-U-204ENST00000418981 GBP2P32456 591 aaPredicted RBP13.16□□□□□ -0.3
HLA-U-204ENST00000418981 PIK3CAP42336 1068 aa13.16□□□□□ -0.3
HLA-U-204ENST00000418981 INCA1Q0VD86 236 aa13.16□□□□□ -0.3
HLA-U-204ENST00000418981 RBM43Q6ZSC3 357 aaKnown RBP13.16□□□□□ -0.3
HLA-U-204ENST00000418981 BMP8AQ7Z5Y6 402 aa13.16□□□□□ -0.3
HLA-U-204ENST00000418981 FAM114A1Q8IWE2 563 aa13.16□□□□□ -0.3
HLA-U-204ENST00000418981 CRYBG2Q8N1P7 616 aa13.16□□□□□ -0.3
HLA-U-204ENST00000418981 KIAA1958Q8N8K9 716 aa13.16□□□□□ -0.3
HLA-U-204ENST00000418981 ATAD1Q8NBU5 361 aa13.16□□□□□ -0.3
HLA-U-204ENST00000418981 TRMT2BQ96GJ1 504 aaKnown RBP13.16□□□□□ -0.3
HLA-U-204ENST00000418981 MYRFLQ96LU7 910 aa13.16□□□□□ -0.3
HLA-U-204ENST00000418981 NECAB3Q96P71 396 aaPredicted RBP13.16□□□□□ -0.3
HLA-U-204ENST00000418981 BCO2Q9BYV7 579 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms