RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 DCAF17Q5H9S7 520 aaPredicted RBP19.98■□□□□ 0.79
PTCD3-204ENST00000418628 ZNF667Q5HYK9 610 aa19.98■□□□□ 0.79
PTCD3-204ENST00000418628 INTS6LQ5JSJ4 861 aaKnown RBP19.98■□□□□ 0.79
PTCD3-204ENST00000418628 LIN9Q5TKA1 542 aa19.98■□□□□ 0.79
PTCD3-204ENST00000418628 TMC5Q6UXY8 1006 aa19.98■□□□□ 0.79
PTCD3-204ENST00000418628 CCDC149Q6ZUS6 474 aa19.98■□□□□ 0.79
PTCD3-204ENST00000418628 THEM5Q8N1Q8 247 aa19.98■□□□□ 0.79
PTCD3-204ENST00000418628 FBXL13Q8NEE6 735 aa19.98■□□□□ 0.79
PTCD3-204ENST00000418628 SEMA4DQ92854 862 aa19.98■□□□□ 0.79
PTCD3-204ENST00000418628 NECTIN4Q96NY8 510 aa19.98■□□□□ 0.79
PTCD3-204ENST00000418628 MRPL45Q9BRJ2 306 aaKnown RBP19.98■□□□□ 0.79
PTCD3-204ENST00000418628 APOL5Q9BWW9 433 aa19.98■□□□□ 0.79
PTCD3-204ENST00000418628 BCO2Q9BYV7 579 aa19.98■□□□□ 0.79
PTCD3-204ENST00000418628 SMYD3Q9H7B4 428 aa19.98■□□□□ 0.79
PTCD3-204ENST00000418628 DDX43Q9NXZ2 648 aaKnown RBP19.98■□□□□ 0.79
PTCD3-204ENST00000418628 PRKAG3Q9UGI9 489 aa19.98■□□□□ 0.79
PTCD3-204ENST00000418628 CCDC195A0A1B0GUA6 201 aa19.97■□□□□ 0.79
PTCD3-204ENST00000418628 FGFR1OPO95684 399 aaKnown RBP19.97■□□□□ 0.79
PTCD3-204ENST00000418628 PTMSP20962 102 aa19.97■□□□□ 0.79
PTCD3-204ENST00000418628 MTHFRP42898 656 aa19.97■□□□□ 0.79
PTCD3-204ENST00000418628 FMO5P49326 533 aa19.97■□□□□ 0.79
PTCD3-204ENST00000418628 ARPP19P56211 112 aa19.97■□□□□ 0.79
PTCD3-204ENST00000418628 TNNC1P63316 161 aa19.97■□□□□ 0.79
PTCD3-204ENST00000418628 MYL7Q01449 175 aa19.97■□□□□ 0.79
PTCD3-204ENST00000418628 ADCY1Q08828 1119 aa19.97■□□□□ 0.79
PTCD3-204ENST00000418628 SMARCB1Q12824 385 aa19.97■□□□□ 0.79
PTCD3-204ENST00000418628 CCDC40Q4G0X9 1142 aa19.97■□□□□ 0.79
PTCD3-204ENST00000418628 TCERG1LQ5VWI1 586 aa19.97■□□□□ 0.79
PTCD3-204ENST00000418628 SPOPLQ6IQ16 392 aa19.97■□□□□ 0.79
PTCD3-204ENST00000418628 CES5AQ6NT32 575 aa19.97■□□□□ 0.79
PTCD3-204ENST00000418628 ELMO3Q96BJ8 720 aa19.97■□□□□ 0.79
PTCD3-204ENST00000418628 FAXDC2Q96IV6 333 aa19.97■□□□□ 0.79
PTCD3-204ENST00000418628 SDCBP2Q9H190 292 aa19.97■□□□□ 0.79
PTCD3-204ENST00000418628 POMKQ9H5K3 350 aa19.97■□□□□ 0.79
PTCD3-204ENST00000418628 MMRN2Q9H8L6 949 aa19.97■□□□□ 0.79
PTCD3-204ENST00000418628 TMLHEQ9NVH6 421 aa19.97■□□□□ 0.79
PTCD3-204ENST00000418628 INSL5Q9Y5Q6 135 aa19.97■□□□□ 0.79
PTCD3-204ENST00000418628 C19orf67A6NJJ6 358 aa19.96■□□□□ 0.79
PTCD3-204ENST00000418628 LMO2P25791 158 aa19.96■□□□□ 0.79
PTCD3-204ENST00000418628 PCSK1P29120 753 aa19.96■□□□□ 0.79
PTCD3-204ENST00000418628 ZP2Q05996 745 aa19.96■□□□□ 0.79
PTCD3-204ENST00000418628 STX1AQ16623 288 aa19.96■□□□□ 0.79
PTCD3-204ENST00000418628 PPM1LQ5SGD2 360 aa19.96■□□□□ 0.79
PTCD3-204ENST00000418628 CAVIN1Q6NZI2 390 aaKnown RBP19.96■□□□□ 0.79
PTCD3-204ENST00000418628 FAM171BQ6P995 826 aa19.96■□□□□ 0.79
PTCD3-204ENST00000418628 C11orf57Q6ZUT1 292 aaPredicted RBP19.96■□□□□ 0.79
PTCD3-204ENST00000418628 C2orf15Q8WU43 125 aaKnown RBP19.96■□□□□ 0.79
PTCD3-204ENST00000418628 CNOT6LQ96LI5 555 aaKnown RBP19.96■□□□□ 0.79
PTCD3-204ENST00000418628 RIPOR3Q96MK2 946 aa19.96■□□□□ 0.79
PTCD3-204ENST00000418628 PI4K2AQ9BTU6 479 aa19.96■□□□□ 0.79
PTCD3-204ENST00000418628 THAP9Q9H5L6 903 aa19.96■□□□□ 0.79
PTCD3-204ENST00000418628 NXF1Q9UBU9 619 aaKnown RBP19.96■□□□□ 0.79
PTCD3-204ENST00000418628 YIPF1Q9Y548 306 aa19.96■□□□□ 0.79
PTCD3-204ENST00000418628 P4HA2O15460 535 aa19.95■□□□□ 0.78
PTCD3-204ENST00000418628 WEE2P0C1S8 567 aa19.95■□□□□ 0.78
PTCD3-204ENST00000418628 CCDC192P0DO97 292 aa19.95■□□□□ 0.78
PTCD3-204ENST00000418628 ACAT1P24752 427 aaKnown RBP19.95■□□□□ 0.78
PTCD3-204ENST00000418628 TSPY1Q01534 308 aa19.95■□□□□ 0.78
PTCD3-204ENST00000418628 INCA1Q0VD86 236 aa19.95■□□□□ 0.78
PTCD3-204ENST00000418628 CCDC142Q17RM4 750 aa19.95■□□□□ 0.78
PTCD3-204ENST00000418628 SLC39A12Q504Y0 691 aa19.95■□□□□ 0.78
PTCD3-204ENST00000418628 ADHFE1Q8IWW8 467 aa19.95■□□□□ 0.78
PTCD3-204ENST00000418628 TTC9BQ8N6N2 239 aa19.95■□□□□ 0.78
PTCD3-204ENST00000418628 LMO3Q8TAP4 145 aa19.95■□□□□ 0.78
PTCD3-204ENST00000418628 SPPL2BQ8TCT7 592 aa19.95■□□□□ 0.78
PTCD3-204ENST00000418628 ADAMTS19Q8TE59 1207 aa19.95■□□□□ 0.78
PTCD3-204ENST00000418628 SMG7Q92540 1137 aaKnown RBP19.95■□□□□ 0.78
PTCD3-204ENST00000418628 PGLYRP2Q96PD5 576 aa19.95■□□□□ 0.78
PTCD3-204ENST00000418628 MMS19Q96T76 1030 aa19.95■□□□□ 0.78
PTCD3-204ENST00000418628 SYT15Q9BQS2 421 aa19.95■□□□□ 0.78
PTCD3-204ENST00000418628 FUCA2Q9BTY2 467 aa19.95■□□□□ 0.78
PTCD3-204ENST00000418628 PHF7Q9BWX1 381 aaPredicted RBP19.95■□□□□ 0.78
PTCD3-204ENST00000418628 NIF3L1Q9GZT8 377 aa19.95■□□□□ 0.78
PTCD3-204ENST00000418628 CYP4F11Q9HBI6 524 aa19.95■□□□□ 0.78
PTCD3-204ENST00000418628 CRTAC1Q9NQ79 661 aa19.95■□□□□ 0.78
PTCD3-204ENST00000418628 ANO10Q9NW15 660 aa19.95■□□□□ 0.78
PTCD3-204ENST00000418628 RAB20Q9NX57 234 aa19.95■□□□□ 0.78
PTCD3-204ENST00000418628 CDH9Q9ULB4 789 aa19.95■□□□□ 0.78
PTCD3-204ENST00000418628 N4BP1O75113 896 aaKnown RBP19.94■□□□□ 0.78
PTCD3-204ENST00000418628 RAP1GAPP47736 663 aa19.94■□□□□ 0.78
PTCD3-204ENST00000418628 ATAT1Q5SQI0 421 aa19.94■□□□□ 0.78
PTCD3-204ENST00000418628 DCP1BQ8IZD4 617 aaKnown RBP19.94■□□□□ 0.78
PTCD3-204ENST00000418628 ATAD1Q8NBU5 361 aa19.94■□□□□ 0.78
PTCD3-204ENST00000418628 ENOX1Q8TC92 643 aaKnown RBP19.94■□□□□ 0.78
PTCD3-204ENST00000418628 IMPG2Q9BZV3 1241 aa19.94■□□□□ 0.78
PTCD3-204ENST00000418628 DNAJC25Q9H1X3 360 aa19.94■□□□□ 0.78
PTCD3-204ENST00000418628 FAM124BQ9H5Z6 455 aaPredicted RBP19.94■□□□□ 0.78
PTCD3-204ENST00000418628 WDR6Q9NNW5 1121 aaKnown RBP19.94■□□□□ 0.78
PTCD3-204ENST00000418628 ABCB6Q9NP58 842 aa19.94■□□□□ 0.78
PTCD3-204ENST00000418628 CLUHO75153 1309 aa19.94■□□□□ 0.78
PTCD3-204ENST00000418628 MYBPHLA2RUH7 354 aa19.93■□□□□ 0.78
PTCD3-204ENST00000418628 LOC730098B7Z3J9 87 aa19.93■□□□□ 0.78
PTCD3-204ENST00000418628 P4HA1P13674 534 aa19.93■□□□□ 0.78
PTCD3-204ENST00000418628 CDH8P55286 799 aa19.93■□□□□ 0.78
PTCD3-204ENST00000418628 TYRO3Q06418 890 aa19.93■□□□□ 0.78
PTCD3-204ENST00000418628 KCNH2Q12809 1159 aa19.93■□□□□ 0.78
PTCD3-204ENST00000418628 DUSP4Q13115 394 aa19.93■□□□□ 0.78
PTCD3-204ENST00000418628 NFE2Q16621 373 aaPredicted RBP19.93■□□□□ 0.78
PTCD3-204ENST00000418628 CFAP221Q4G0U5 840 aa19.93■□□□□ 0.78
PTCD3-204ENST00000418628 SASS6Q6UVJ0 657 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms