RNA–Protein interactions for RNA: ENST00000417508.1

VPS16-204, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-204ENST00000417508 PCIF1Q9H4Z3 704 aa19.84■□□□□ 0.77
VPS16-204ENST00000417508 SPATA6Q9NWH7 488 aaPredicted RBP19.84■□□□□ 0.77
VPS16-204ENST00000417508 CFAP45Q9UL16 551 aa19.84■□□□□ 0.77
VPS16-204ENST00000417508 PCDHB5Q9Y5E4 795 aa19.84■□□□□ 0.77
VPS16-204ENST00000417508 FANCMQ8IYD8 2048 aa19.84■□□□□ 0.77
VPS16-204ENST00000417508 GOLGA8IPA6NC78 632 aa19.83■□□□□ 0.77
VPS16-204ENST00000417508 GOLGA8JA6NMD2 632 aa19.83■□□□□ 0.77
VPS16-204ENST00000417508 CHADO15335 359 aa19.83■□□□□ 0.77
VPS16-204ENST00000417508 ITGB3P05106 788 aa19.83■□□□□ 0.77
VPS16-204ENST00000417508 GABRR2P28476 465 aa19.83■□□□□ 0.77
VPS16-204ENST00000417508 CDC25CP30307 473 aa19.83■□□□□ 0.77
VPS16-204ENST00000417508 SHC4Q6S5L8 630 aa19.83■□□□□ 0.77
VPS16-204ENST00000417508 MAMSTRQ6ZN01 415 aa19.83■□□□□ 0.77
VPS16-204ENST00000417508 DPH6Q7L8W6 267 aa19.83■□□□□ 0.77
VPS16-204ENST00000417508 ARID3BQ8IVW6 561 aaPredicted RBP19.83■□□□□ 0.77
VPS16-204ENST00000417508 YAF2Q8IY57 180 aa19.83■□□□□ 0.77
VPS16-204ENST00000417508 TTC9BQ8N6N2 239 aa19.83■□□□□ 0.77
VPS16-204ENST00000417508 ZSWIM2Q8NEG5 633 aa19.83■□□□□ 0.77
VPS16-204ENST00000417508 MSANTD3Q96H12 275 aa19.83■□□□□ 0.77
VPS16-204ENST00000417508 ANKRD36BP1Q96IX9 119 aa19.83■□□□□ 0.77
VPS16-204ENST00000417508 IER2Q9BTL4 223 aa19.83■□□□□ 0.77
VPS16-204ENST00000417508 PDE11AQ9HCR9 933 aa19.83■□□□□ 0.77
VPS16-204ENST00000417508 FAM13BQ9NYF5 915 aa19.83■□□□□ 0.77
VPS16-204ENST00000417508 GVINP1Q7Z2Y8 2422 aa19.83■□□□□ 0.76
VPS16-204ENST00000417508 SOBPA7XYQ1 873 aa19.82■□□□□ 0.76
VPS16-204ENST00000417508 TULP1O00294 542 aaPredicted RBP19.82■□□□□ 0.76
VPS16-204ENST00000417508 DPYSL4O14531 572 aa19.82■□□□□ 0.76
VPS16-204ENST00000417508 F13A1P00488 732 aa19.82■□□□□ 0.76
VPS16-204ENST00000417508 LMNAP02545 664 aaKnown RBP19.82■□□□□ 0.76
VPS16-204ENST00000417508 TMEM191BP0C7N4 346 aa19.82■□□□□ 0.76
VPS16-204ENST00000417508 TARSP26639 723 aaKnown RBP19.82■□□□□ 0.76
VPS16-204ENST00000417508 LHX1P48742 406 aa19.82■□□□□ 0.76
VPS16-204ENST00000417508 WNT7BP56706 349 aa19.82■□□□□ 0.76
VPS16-204ENST00000417508 ASIC1P78348 528 aa19.82■□□□□ 0.76
VPS16-204ENST00000417508 MYL7Q01449 175 aa19.82■□□□□ 0.76
VPS16-204ENST00000417508 FCHO2Q0JRZ9 810 aa19.82■□□□□ 0.76
VPS16-204ENST00000417508 MYO1EQ12965 1108 aa19.82■□□□□ 0.76
VPS16-204ENST00000417508 DUOXA2Q1HG44 320 aa19.82■□□□□ 0.76
VPS16-204ENST00000417508 PDCL2Q8N4E4 241 aa19.82■□□□□ 0.76
VPS16-204ENST00000417508 TOP6BLQ8N6T0 577 aa19.82■□□□□ 0.76
VPS16-204ENST00000417508 CXorf38Q8TB03 319 aa19.82■□□□□ 0.76
VPS16-204ENST00000417508 LEO1Q8WVC0 666 aaPredicted RBP19.82■□□□□ 0.76
VPS16-204ENST00000417508 GCNAQ96QF7 691 aa19.82■□□□□ 0.76
VPS16-204ENST00000417508 TASP1Q9H6P5 420 aa19.82■□□□□ 0.76
VPS16-204ENST00000417508 INTS13Q9NVM9 706 aa19.82■□□□□ 0.76
VPS16-204ENST00000417508 USP34Q70CQ2 3546 aa19.81■□□□□ 0.76
VPS16-204ENST00000417508 SHISA7A6NL88 538 aa19.81■□□□□ 0.76
VPS16-204ENST00000417508 SOAT2O75908 522 aa19.81■□□□□ 0.76
VPS16-204ENST00000417508 KRT19P08727 400 aa19.81■□□□□ 0.76
VPS16-204ENST00000417508 ATF6P18850 670 aa19.81■□□□□ 0.76
VPS16-204ENST00000417508 FZD5Q13467 585 aa19.81■□□□□ 0.76
VPS16-204ENST00000417508 FAM26FQ5R3K3 315 aa19.81■□□□□ 0.76
VPS16-204ENST00000417508 GPR158Q5T848 1215 aa19.81■□□□□ 0.76
VPS16-204ENST00000417508 UNC13DQ70J99 1090 aa19.81■□□□□ 0.76
VPS16-204ENST00000417508 EPM2AIP1Q7L775 607 aaPredicted RBP19.81■□□□□ 0.76
VPS16-204ENST00000417508 MAML2Q8IZL2 1156 aaPredicted RBP19.81■□□□□ 0.76
VPS16-204ENST00000417508 ADSSL1Q8N142 457 aa19.81■□□□□ 0.76
VPS16-204ENST00000417508 CSGALNACT1Q8TDX6 532 aa19.81■□□□□ 0.76
VPS16-204ENST00000417508 NOC3LQ8WTT2 800 aaKnown RBP19.81■□□□□ 0.76
VPS16-204ENST00000417508 FAM3CQ92520 227 aa19.81■□□□□ 0.76
VPS16-204ENST00000417508 C8orf33Q9H7E9 229 aaPredicted RBP19.81■□□□□ 0.76
VPS16-204ENST00000417508 ABCB6Q9NP58 842 aa19.81■□□□□ 0.76
VPS16-204ENST00000417508 ABI2Q9NYB9 513 aaPredicted RBP19.81■□□□□ 0.76
VPS16-204ENST00000417508 L1RE1Q9UN81 338 aa19.81■□□□□ 0.76
VPS16-204ENST00000417508 SPTBN4Q9H254 2564 aa19.81■□□□□ 0.76
VPS16-204ENST00000417508 UBE4BO95155 1302 aa19.8■□□□□ 0.76
VPS16-204ENST00000417508 PVALEFA0A1B0GWK0 134 aa19.8■□□□□ 0.76
VPS16-204ENST00000417508 POLR2DO15514 142 aaKnown RBP19.8■□□□□ 0.76
VPS16-204ENST00000417508 TNNC2P02585 160 aa19.8■□□□□ 0.76
VPS16-204ENST00000417508 PCSK1P29120 753 aa19.8■□□□□ 0.76
VPS16-204ENST00000417508 ME1P48163 572 aa19.8■□□□□ 0.76
VPS16-204ENST00000417508 BFSP1Q12934 665 aa19.8■□□□□ 0.76
VPS16-204ENST00000417508 ARHGAP29Q52LW3 1261 aa19.8■□□□□ 0.76
VPS16-204ENST00000417508 ZNF687Q8N1G0 1237 aa19.8■□□□□ 0.76
VPS16-204ENST00000417508 LPIN3Q9BQK8 851 aa19.8■□□□□ 0.76
VPS16-204ENST00000417508 MKNK1Q9BUB5 465 aa19.8■□□□□ 0.76
VPS16-204ENST00000417508 IL21Q9HBE4 155 aa19.8■□□□□ 0.76
VPS16-204ENST00000417508 DDX43Q9NXZ2 648 aaKnown RBP19.8■□□□□ 0.76
VPS16-204ENST00000417508 HSPBP1Q9NZL4 362 aa19.8■□□□□ 0.76
VPS16-204ENST00000417508 CGNQ9P2M7 1197 aaKnown RBP19.8■□□□□ 0.76
VPS16-204ENST00000417508 SIX4Q9UIU6 781 aa19.8■□□□□ 0.76
VPS16-204ENST00000417508 PCDHA7Q9UN72 937 aa19.8■□□□□ 0.76
VPS16-204ENST00000417508 SNX9Q9Y5X1 595 aa19.8■□□□□ 0.76
VPS16-204ENST00000417508 PIAS3Q9Y6X2 628 aa19.8■□□□□ 0.76
VPS16-204ENST00000417508 R4GN57 208 aa19.8■□□□□ 0.76
VPS16-204ENST00000417508 ARNTLO00327 626 aa19.79■□□□□ 0.76
VPS16-204ENST00000417508 GABRDO14764 452 aa19.79■□□□□ 0.76
VPS16-204ENST00000417508 CSH1P0DML2 217 aa19.79■□□□□ 0.76
VPS16-204ENST00000417508 CSH2P0DML3 217 aa19.79■□□□□ 0.76
VPS16-204ENST00000417508 DDX6P26196 483 aaKnown RBP eCLIP19.79■□□□□ 0.76
VPS16-204ENST00000417508 HOXD13P35453 343 aa19.79■□□□□ 0.76
VPS16-204ENST00000417508 RPL10AP62906 217 aaKnown RBP19.79■□□□□ 0.76
VPS16-204ENST00000417508 PLCB2Q00722 1185 aa19.79■□□□□ 0.76
VPS16-204ENST00000417508 EHHADHQ08426 723 aa19.79■□□□□ 0.76
VPS16-204ENST00000417508 INTS6LQ5JSJ4 861 aaKnown RBP19.79■□□□□ 0.76
VPS16-204ENST00000417508 FOXD4L5Q5VV16 416 aaPredicted RBP19.79■□□□□ 0.76
VPS16-204ENST00000417508 GIPC2Q8TF65 315 aa19.79■□□□□ 0.76
VPS16-204ENST00000417508 FOXD4L4Q8WXT5 416 aaPredicted RBP19.79■□□□□ 0.76
VPS16-204ENST00000417508 HPS3Q969F9 1004 aa19.79■□□□□ 0.76
VPS16-204ENST00000417508 FAM126AQ9BYI3 521 aaPredicted RBP19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms