RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 MAGEC2Q9UBF1 373 aaPredicted RBP24.72■■□□□ 1.55
SMARCB1-205ENST00000417137 PMM2O15305 246 aa24.71■■□□□ 1.55
SMARCB1-205ENST00000417137 P4HA2O15460 535 aa24.71■■□□□ 1.55
SMARCB1-205ENST00000417137 XYLBO75191 536 aa24.71■■□□□ 1.55
SMARCB1-205ENST00000417137 FMO5P49326 533 aa24.71■■□□□ 1.55
SMARCB1-205ENST00000417137 CBWD6Q4V339 395 aa24.71■■□□□ 1.55
SMARCB1-205ENST00000417137 SLC39A12Q504Y0 691 aa24.71■■□□□ 1.55
SMARCB1-205ENST00000417137 CBWD3Q5JTY5 395 aa24.71■■□□□ 1.55
SMARCB1-205ENST00000417137 CBWD5Q5RIA9 395 aa24.71■■□□□ 1.55
SMARCB1-205ENST00000417137 OR6B3Q8NGW1 331 aa24.71■■□□□ 1.55
SMARCB1-205ENST00000417137 ENOX1Q8TC92 643 aaKnown RBP24.71■■□□□ 1.55
SMARCB1-205ENST00000417137 KBTBD7Q8WVZ9 684 aa24.71■■□□□ 1.55
SMARCB1-205ENST00000417137 SUSD6Q92537 303 aa24.71■■□□□ 1.55
SMARCB1-205ENST00000417137 FAXDC2Q96IV6 333 aa24.71■■□□□ 1.55
SMARCB1-205ENST00000417137 CNOT6LQ96LI5 555 aaKnown RBP24.71■■□□□ 1.55
SMARCB1-205ENST00000417137 TMEM209Q96SK2 561 aa24.71■■□□□ 1.55
SMARCB1-205ENST00000417137 PIDD1Q9HB75 910 aa24.71■■□□□ 1.55
SMARCB1-205ENST00000417137 HSFX1Q9UBD0 423 aa24.71■■□□□ 1.55
SMARCB1-205ENST00000417137 CDH9Q9ULB4 789 aa24.71■■□□□ 1.55
SMARCB1-205ENST00000417137 POLIQ9UNA4 740 aa24.71■■□□□ 1.55
SMARCB1-205ENST00000417137 COQ4Q9Y3A0 265 aa24.71■■□□□ 1.55
SMARCB1-205ENST00000417137 RFPL2O75678 378 aa24.7■■□□□ 1.54
SMARCB1-205ENST00000417137 PAPLNO95428 1278 aa24.7■■□□□ 1.54
SMARCB1-205ENST00000417137 NOP14P78316 857 aaKnown RBP24.7■■□□□ 1.54
SMARCB1-205ENST00000417137 KCNH2Q12809 1159 aa24.7■■□□□ 1.54
SMARCB1-205ENST00000417137 CBX2Q14781 532 aaPredicted RBP24.7■■□□□ 1.54
SMARCB1-205ENST00000417137 NFE2Q16621 373 aaPredicted RBP24.7■■□□□ 1.54
SMARCB1-205ENST00000417137 OSTM1Q86WC4 334 aa24.7■■□□□ 1.54
SMARCB1-205ENST00000417137 SMG7Q92540 1137 aaKnown RBP24.7■■□□□ 1.54
SMARCB1-205ENST00000417137 PGLYRP2Q96PD5 576 aa24.7■■□□□ 1.54
SMARCB1-205ENST00000417137 MRPL45Q9BRJ2 306 aaKnown RBP24.7■■□□□ 1.54
SMARCB1-205ENST00000417137 PI4K2AQ9BTU6 479 aa24.7■■□□□ 1.54
SMARCB1-205ENST00000417137 NAT10Q9H0A0 1025 aaKnown RBP24.7■■□□□ 1.54
SMARCB1-205ENST00000417137 SEC24AO95486 1093 aa24.69■■□□□ 1.54
SMARCB1-205ENST00000417137 LRG1P02750 347 aa24.69■■□□□ 1.54
SMARCB1-205ENST00000417137 AFPP02771 609 aaKnown RBP24.69■■□□□ 1.54
SMARCB1-205ENST00000417137 TYRO3Q06418 890 aa24.69■■□□□ 1.54
SMARCB1-205ENST00000417137 MAPRE1Q15691 268 aaKnown RBP24.69■■□□□ 1.54
SMARCB1-205ENST00000417137 INTS6LQ5JSJ4 861 aaKnown RBP24.69■■□□□ 1.54
SMARCB1-205ENST00000417137 SPPL2BQ8TCT7 592 aa24.69■■□□□ 1.54
SMARCB1-205ENST00000417137 NIF3L1Q9GZT8 377 aa24.69■■□□□ 1.54
SMARCB1-205ENST00000417137 CYP3A43Q9HB55 503 aa24.69■■□□□ 1.54
SMARCB1-205ENST00000417137 MTMR11A4FU01 709 aa24.68■■□□□ 1.54
SMARCB1-205ENST00000417137 A8MXQ7 604 aa24.68■■□□□ 1.54
SMARCB1-205ENST00000417137 POU2F2P09086 479 aa24.68■■□□□ 1.54
SMARCB1-205ENST00000417137 PDGFRBP09619 1106 aa24.68■■□□□ 1.54
SMARCB1-205ENST00000417137 IL9P15248 144 aa24.68■■□□□ 1.54
SMARCB1-205ENST00000417137 TRIM21P19474 475 aaKnown RBP24.68■■□□□ 1.54
SMARCB1-205ENST00000417137 ACAT1P24752 427 aaKnown RBP24.68■■□□□ 1.54
SMARCB1-205ENST00000417137 LMO2P25791 158 aa24.68■■□□□ 1.54
SMARCB1-205ENST00000417137 MTIF2P46199 727 aaKnown RBP24.68■■□□□ 1.54
SMARCB1-205ENST00000417137 TUFMP49411 452 aaKnown RBP24.68■■□□□ 1.54
SMARCB1-205ENST00000417137 DUSP4Q13115 394 aa24.68■■□□□ 1.54
SMARCB1-205ENST00000417137 PLD1Q13393 1074 aa24.68■■□□□ 1.54
SMARCB1-205ENST00000417137 SPOPLQ6IQ16 392 aa24.68■■□□□ 1.54
SMARCB1-205ENST00000417137 SCARA5Q6ZMJ2 495 aa24.68■■□□□ 1.54
SMARCB1-205ENST00000417137 LRRTM3Q86VH5 581 aa24.68■■□□□ 1.54
SMARCB1-205ENST00000417137 ELMOD1Q8N336 334 aa24.68■■□□□ 1.54
SMARCB1-205ENST00000417137 ATAD1Q8NBU5 361 aa24.68■■□□□ 1.54
SMARCB1-205ENST00000417137 SEMA4DQ92854 862 aa24.68■■□□□ 1.54
SMARCB1-205ENST00000417137 SYT15Q9BQS2 421 aa24.68■■□□□ 1.54
SMARCB1-205ENST00000417137 DNAI2Q9GZS0 605 aa24.68■■□□□ 1.54
SMARCB1-205ENST00000417137 SMYD3Q9H7B4 428 aa24.68■■□□□ 1.54
SMARCB1-205ENST00000417137 PRKAG3Q9UGI9 489 aa24.68■■□□□ 1.54
SMARCB1-205ENST00000417137 PCDHB5Q9Y5E4 795 aa24.68■■□□□ 1.54
SMARCB1-205ENST00000417137 ALDH1A3P47895 512 aa24.67■■□□□ 1.54
SMARCB1-205ENST00000417137 CDH8P55286 799 aa24.67■■□□□ 1.54
SMARCB1-205ENST00000417137 IRF2BP1Q8IU81 584 aa24.67■■□□□ 1.54
SMARCB1-205ENST00000417137 ZNF707Q96C28 371 aaPredicted RBP24.67■■□□□ 1.54
SMARCB1-205ENST00000417137 APOBEC3GQ9HC16 384 aaKnown RBP24.67■■□□□ 1.54
SMARCB1-205ENST00000417137 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.67■■□□□ 1.54
SMARCB1-205ENST00000417137 GTF3C4Q9UKN8 822 aa24.67■■□□□ 1.54
SMARCB1-205ENST00000417137 NFE2L3Q9Y4A8 694 aa24.67■■□□□ 1.54
SMARCB1-205ENST00000417137 INSL5Q9Y5Q6 135 aa24.67■■□□□ 1.54
SMARCB1-205ENST00000417137 BRWD1Q9NSI6 2320 aa24.67■■□□□ 1.54
SMARCB1-205ENST00000417137 CCL16O15467 120 aa24.66■■□□□ 1.54
SMARCB1-205ENST00000417137 WEE2P0C1S8 567 aa24.66■■□□□ 1.54
SMARCB1-205ENST00000417137 ASPAP45381 313 aa24.66■■□□□ 1.54
SMARCB1-205ENST00000417137 FAM171BQ6P995 826 aa24.66■■□□□ 1.54
SMARCB1-205ENST00000417137 C4orf50Q6ZRC1 276 aa24.66■■□□□ 1.54
SMARCB1-205ENST00000417137 TTC39CQ8N584 583 aa24.66■■□□□ 1.54
SMARCB1-205ENST00000417137 ELMO3Q96BJ8 720 aa24.66■■□□□ 1.54
SMARCB1-205ENST00000417137 TNIP3Q96KP6 325 aa24.66■■□□□ 1.54
SMARCB1-205ENST00000417137 PHF7Q9BWX1 381 aaPredicted RBP24.66■■□□□ 1.54
SMARCB1-205ENST00000417137 BCO2Q9BYV7 579 aa24.66■■□□□ 1.54
SMARCB1-205ENST00000417137 DNAJC25Q9H1X3 360 aa24.66■■□□□ 1.54
SMARCB1-205ENST00000417137 SLC27A5Q9Y2P5 690 aa24.66■■□□□ 1.54
SMARCB1-205ENST00000417137 PRKCSHP14314 528 aaPredicted RBP24.65■■□□□ 1.54
SMARCB1-205ENST00000417137 PLXNA3P51805 1871 aa24.65■■□□□ 1.54
SMARCB1-205ENST00000417137 C11orf57Q6ZUT1 292 aaPredicted RBP24.65■■□□□ 1.54
SMARCB1-205ENST00000417137 UNC93AQ86WB7 457 aa24.65■■□□□ 1.54
SMARCB1-205ENST00000417137 SPATA2LQ8IUW3 424 aaPredicted RBP24.65■■□□□ 1.54
SMARCB1-205ENST00000417137 FAM124BQ9H5Z6 455 aaPredicted RBP24.65■■□□□ 1.54
SMARCB1-205ENST00000417137 ABCB6Q9NP58 842 aa24.65■■□□□ 1.54
SMARCB1-205ENST00000417137 ABI2Q9NYB9 513 aaPredicted RBP24.65■■□□□ 1.54
SMARCB1-205ENST00000417137 REV3LO60673 3130 aa24.64■■□□□ 1.54
SMARCB1-205ENST00000417137 MUC3AQ02505 3323 aa24.64■■□□□ 1.54
SMARCB1-205ENST00000417137 VNN2O95498 520 aa24.64■■□□□ 1.54
SMARCB1-205ENST00000417137 PTPN1P18031 435 aaKnown RBP24.64■■□□□ 1.54
SMARCB1-205ENST00000417137 EEF1GP26641 437 aaKnown RBP24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms