RNA–Protein interactions for RNA: ENST00000416918.5

TRAPPC12-205, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-205ENST00000416918 SNX17Q15036 470 aa11.69□□□□□ -0.54
TRAPPC12-205ENST00000416918 PPP1R15BQ5SWA1 713 aa11.69□□□□□ -0.54
TRAPPC12-205ENST00000416918 PRELID2Q8N945 189 aa11.69□□□□□ -0.54
TRAPPC12-205ENST00000416918 CEP120Q8N960 986 aa11.69□□□□□ -0.54
TRAPPC12-205ENST00000416918 TTC13Q8NBP0 860 aa11.69□□□□□ -0.54
TRAPPC12-205ENST00000416918 SLC4A11Q8NBS3 891 aa11.69□□□□□ -0.54
TRAPPC12-205ENST00000416918 ATL2Q8NHH9 583 aa11.69□□□□□ -0.54
TRAPPC12-205ENST00000416918 KRT35Q92764 455 aa11.69□□□□□ -0.54
TRAPPC12-205ENST00000416918 DDX27Q96GQ7 796 aaKnown RBP11.69□□□□□ -0.54
TRAPPC12-205ENST00000416918 CPB2Q96IY4 423 aa11.69□□□□□ -0.54
TRAPPC12-205ENST00000416918 SH3GL2Q99962 352 aa11.69□□□□□ -0.54
TRAPPC12-205ENST00000416918 SEZ6LQ9BYH1 1024 aa11.69□□□□□ -0.54
TRAPPC12-205ENST00000416918 CELF4Q9BZC1 486 aaKnown RBP11.69□□□□□ -0.54
TRAPPC12-205ENST00000416918 FAM49AQ9H0Q0 323 aaPredicted RBP11.69□□□□□ -0.54
TRAPPC12-205ENST00000416918 SYNCQ9H7C4 482 aa11.69□□□□□ -0.54
TRAPPC12-205ENST00000416918 GDAP2Q9NXN4 497 aa11.69□□□□□ -0.54
TRAPPC12-205ENST00000416918 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.69□□□□□ -0.546e-6■■■■■ 55.1
TRAPPC12-205ENST00000416918 SQORQ9Y6N5 450 aa11.69□□□□□ -0.54
TRAPPC12-205ENST00000416918 TMEM88BA6NKF7 163 aa11.68□□□□□ -0.54
TRAPPC12-205ENST00000416918 SEPT4O43236 478 aa11.68□□□□□ -0.54
TRAPPC12-205ENST00000416918 ATMINO43313 823 aaPredicted RBP11.68□□□□□ -0.54
TRAPPC12-205ENST00000416918 CAND2O75155 1236 aa11.68□□□□□ -0.54
TRAPPC12-205ENST00000416918 ERBB2P04626 1255 aa11.68□□□□□ -0.54
TRAPPC12-205ENST00000416918 RARBP10826 455 aa11.68□□□□□ -0.54
TRAPPC12-205ENST00000416918 KRT3P12035 628 aa11.68□□□□□ -0.54
TRAPPC12-205ENST00000416918 SKIP12755 728 aa11.68□□□□□ -0.54
TRAPPC12-205ENST00000416918 ITGA4P13612 1032 aa11.68□□□□□ -0.54
TRAPPC12-205ENST00000416918 BRD2P25440 801 aaKnown RBP11.68□□□□□ -0.54
TRAPPC12-205ENST00000416918 CALCOCO2Q13137 446 aa11.68□□□□□ -0.54
TRAPPC12-205ENST00000416918 CRHR2Q13324 411 aa11.68□□□□□ -0.54
TRAPPC12-205ENST00000416918 ARHGEF6Q15052 776 aa11.68□□□□□ -0.54
TRAPPC12-205ENST00000416918 SV2CQ496J9 727 aa11.68□□□□□ -0.54
TRAPPC12-205ENST00000416918 PRAMEF19Q5SWL8 479 aa11.68□□□□□ -0.54
TRAPPC12-205ENST00000416918 ARHGAP17Q68EM7 881 aa11.68□□□□□ -0.54
TRAPPC12-205ENST00000416918 CCDC137Q6PK04 289 aaKnown RBP11.68□□□□□ -0.54
TRAPPC12-205ENST00000416918 ARCQ7LC44 396 aa11.68□□□□□ -0.54
TRAPPC12-205ENST00000416918 VSIG1Q86XK7 387 aa11.68□□□□□ -0.54
TRAPPC12-205ENST00000416918 JAMLQ86YT9 394 aa11.68□□□□□ -0.54
TRAPPC12-205ENST00000416918 CCDC105Q8IYK2 499 aa11.68□□□□□ -0.54
TRAPPC12-205ENST00000416918 PCSK9Q8NBP7 692 aaKnown RBP11.68□□□□□ -0.54
TRAPPC12-205ENST00000416918 SPATA18Q8TC71 538 aa11.68□□□□□ -0.54
TRAPPC12-205ENST00000416918 MCRS1Q96EZ8 462 aa11.68□□□□□ -0.54
TRAPPC12-205ENST00000416918 HEXIM2Q96MH2 286 aaKnown RBP11.68□□□□□ -0.54
TRAPPC12-205ENST00000416918 FMO2Q99518 471 aa11.68□□□□□ -0.54
TRAPPC12-205ENST00000416918 CFHR5Q9BXR6 569 aa11.68□□□□□ -0.54
TRAPPC12-205ENST00000416918 PRDM16Q9HAZ2 1276 aa11.68□□□□□ -0.54
TRAPPC12-205ENST00000416918 ASNSD1Q9NWL6 643 aa11.68□□□□□ -0.54
TRAPPC12-205ENST00000416918 FLRT1Q9NZU1 646 aa11.68□□□□□ -0.54
TRAPPC12-205ENST00000416918 WHRNQ9P202 907 aa11.68□□□□□ -0.54
TRAPPC12-205ENST00000416918 HESX1Q9UBX0 185 aa11.68□□□□□ -0.54
TRAPPC12-205ENST00000416918 KAT6AQ92794 2004 aa11.67□□□□□ -0.54
TRAPPC12-205ENST00000416918 ARHGEF37A1IGU5 675 aa11.67□□□□□ -0.54
TRAPPC12-205ENST00000416918 O00370 1275 aa11.67□□□□□ -0.54
TRAPPC12-205ENST00000416918 GPR182O15218 404 aa11.67□□□□□ -0.54
TRAPPC12-205ENST00000416918 TTI1O43156 1089 aa11.67□□□□□ -0.54
TRAPPC12-205ENST00000416918 ADCY6O43306 1168 aa11.67□□□□□ -0.54
TRAPPC12-205ENST00000416918 ZNF189O75820 626 aaPredicted RBP11.67□□□□□ -0.54
TRAPPC12-205ENST00000416918 RNF8O76064 485 aa11.67□□□□□ -0.54
TRAPPC12-205ENST00000416918 MYBL2P10244 700 aa11.67□□□□□ -0.54
TRAPPC12-205ENST00000416918 CYBAP13498 195 aa11.67□□□□□ -0.54
TRAPPC12-205ENST00000416918 CST5P28325 142 aaPredicted RBP11.67□□□□□ -0.54
TRAPPC12-205ENST00000416918 PCK1P35558 622 aa11.67□□□□□ -0.54
TRAPPC12-205ENST00000416918 PTGIRP43119 386 aa11.67□□□□□ -0.54
TRAPPC12-205ENST00000416918 ACADSBP45954 432 aa11.67□□□□□ -0.54
TRAPPC12-205ENST00000416918 RAB27AP51159 221 aa11.67□□□□□ -0.54
TRAPPC12-205ENST00000416918 SLC8A3P57103 927 aa11.67□□□□□ -0.54
TRAPPC12-205ENST00000416918 PSMC1P62191 440 aaKnown RBP11.67□□□□□ -0.54
TRAPPC12-205ENST00000416918 MRPS6P82932 125 aaKnown RBP11.67□□□□□ -0.54
TRAPPC12-205ENST00000416918 ZNF211Q13398 564 aaPredicted RBP11.67□□□□□ -0.54
TRAPPC12-205ENST00000416918 GNASQ5JWF2 1037 aa11.67□□□□□ -0.54
TRAPPC12-205ENST00000416918 EMC10Q5UCC4 262 aa11.67□□□□□ -0.54
TRAPPC12-205ENST00000416918 PASD1Q8IV76 773 aa11.67□□□□□ -0.54
TRAPPC12-205ENST00000416918 TMEM192Q8IY95 271 aa11.67□□□□□ -0.54
TRAPPC12-205ENST00000416918 CRYBG2Q8N1P7 616 aa11.67□□□□□ -0.54
TRAPPC12-205ENST00000416918 WDTC1Q8N5D0 677 aa11.67□□□□□ -0.54
TRAPPC12-205ENST00000416918 CCDC89Q8N998 374 aa11.67□□□□□ -0.54
TRAPPC12-205ENST00000416918 DNAJB3Q8WWF6 145 aa11.67□□□□□ -0.54
TRAPPC12-205ENST00000416918 TFAP2BQ92481 460 aa11.67□□□□□ -0.54
TRAPPC12-205ENST00000416918 TNIP3Q96KP6 325 aa11.67□□□□□ -0.54
TRAPPC12-205ENST00000416918 TRAIPQ9BWF2 469 aa11.67□□□□□ -0.54
TRAPPC12-205ENST00000416918 OSBPL8Q9BZF1 889 aa11.67□□□□□ -0.54
TRAPPC12-205ENST00000416918 UBN1Q9NPG3 1134 aa11.67□□□□□ -0.54
TRAPPC12-205ENST00000416918 TMEM51Q9NW97 253 aa11.67□□□□□ -0.54
TRAPPC12-205ENST00000416918 DRG1Q9Y295 367 aaKnown RBP11.67□□□□□ -0.54
TRAPPC12-205ENST00000416918 TRPV2Q9Y5S1 764 aa11.67□□□□□ -0.54
TRAPPC12-205ENST00000416918 HMGB1P1B2RPK0 211 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC12-205ENST00000416918 SMAPO00193 183 aa11.66□□□□□ -0.54
TRAPPC12-205ENST00000416918 PIRO00625 290 aa11.66□□□□□ -0.54
TRAPPC12-205ENST00000416918 PPFIA2O75334 1257 aa11.66□□□□□ -0.54
TRAPPC12-205ENST00000416918 C6orf222P0C671 652 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC12-205ENST00000416918 RARAP10276 462 aa11.66□□□□□ -0.54
TRAPPC12-205ENST00000416918 LRPAP1P30533 357 aa11.66□□□□□ -0.54
TRAPPC12-205ENST00000416918 GPD2P43304 727 aa11.66□□□□□ -0.54
TRAPPC12-205ENST00000416918 PSMC4P43686 418 aa11.66□□□□□ -0.54
TRAPPC12-205ENST00000416918 TAF6P49848 677 aa11.66□□□□□ -0.54
TRAPPC12-205ENST00000416918 CDR1P51861 262 aa11.66□□□□□ -0.54
TRAPPC12-205ENST00000416918 NFX1Q12986 1120 aaKnown RBP11.66□□□□□ -0.54
TRAPPC12-205ENST00000416918 PPP1R7Q15435 360 aa11.66□□□□□ -0.54
TRAPPC12-205ENST00000416918 FBXO47Q5MNV8 452 aa11.66□□□□□ -0.54
TRAPPC12-205ENST00000416918 C9orf57Q5W0N0 161 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms