RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 THEM5Q8N1Q8 247 aa10.86□□□□□ -0.67
MDC1-202ENST00000416571 KCTD17Q8N5Z5 321 aa10.86□□□□□ -0.67
MDC1-202ENST00000416571 SYT2Q8N9I0 419 aaPredicted RBP10.86□□□□□ -0.67
MDC1-202ENST00000416571 PLIN2Q99541 437 aa10.86□□□□□ -0.67
MDC1-202ENST00000416571 MMTAG2Q9BU76 263 aaKnown RBP10.86□□□□□ -0.67
MDC1-202ENST00000416571 HAPLN2Q9GZV7 340 aa10.86□□□□□ -0.67
MDC1-202ENST00000416571 SMG9Q9H0W8 520 aaKnown RBP10.86□□□□□ -0.67
MDC1-202ENST00000416571 GKN1Q9NS71 199 aa10.86□□□□□ -0.67
MDC1-202ENST00000416571 DSEQ9UL01 958 aa10.86□□□□□ -0.67
MDC1-202ENST00000416571 PCDHGA5Q9Y5G8 931 aa10.86□□□□□ -0.67
MDC1-202ENST00000416571 NAV2Q8IVL1 2488 aa10.86□□□□□ -0.67
MDC1-202ENST00000416571 K7ENM7 598 aa10.85□□□□□ -0.67
MDC1-202ENST00000416571 PPEF2O14830 753 aa10.85□□□□□ -0.67
MDC1-202ENST00000416571 RNF40O75150 1001 aa10.85□□□□□ -0.67
MDC1-202ENST00000416571 AKAP3O75969 853 aa10.85□□□□□ -0.67
MDC1-202ENST00000416571 PLA2G4BP0C869 781 aa10.85□□□□□ -0.67
MDC1-202ENST00000416571 ATF6P18850 670 aa10.85□□□□□ -0.67
MDC1-202ENST00000416571 U2AF2P26368 475 aaKnown RBP eCLIP10.85□□□□□ -0.67
MDC1-202ENST00000416571 HOXC13P31276 330 aa10.85□□□□□ -0.67
MDC1-202ENST00000416571 MPLP40238 635 aa10.85□□□□□ -0.67
MDC1-202ENST00000416571 RAP1GAPP47736 663 aa10.85□□□□□ -0.67
MDC1-202ENST00000416571 TOB1P50616 345 aaPredicted RBP10.85□□□□□ -0.67
MDC1-202ENST00000416571 CDR1P51861 262 aa10.85□□□□□ -0.67
MDC1-202ENST00000416571 SMARCB1Q12824 385 aa10.85□□□□□ -0.67
MDC1-202ENST00000416571 TMEM132DQ14C87 1099 aa10.85□□□□□ -0.67
MDC1-202ENST00000416571 ELF2Q15723 593 aa10.85□□□□□ -0.67
MDC1-202ENST00000416571 ENOX2Q16206 610 aaKnown RBP10.85□□□□□ -0.67
MDC1-202ENST00000416571 TMEM196Q5HYL7 178 aa10.85□□□□□ -0.67
MDC1-202ENST00000416571 RNF43Q68DV7 783 aa10.85□□□□□ -0.67
MDC1-202ENST00000416571 JADE1Q6IE81 842 aa10.85□□□□□ -0.67
MDC1-202ENST00000416571 PKN3Q6P5Z2 889 aa10.85□□□□□ -0.67
MDC1-202ENST00000416571 CAMKK1Q8N5S9 505 aa10.85□□□□□ -0.67
MDC1-202ENST00000416571 MAB21L3Q8N8X9 362 aa10.85□□□□□ -0.67
MDC1-202ENST00000416571 OR10T2Q8NGX3 314 aa10.85□□□□□ -0.67
MDC1-202ENST00000416571 SPPL2BQ8TCT7 592 aa10.85□□□□□ -0.67
MDC1-202ENST00000416571 GIPC2Q8TF65 315 aa10.85□□□□□ -0.67
MDC1-202ENST00000416571 C2orf15Q8WU43 125 aaKnown RBP10.85□□□□□ -0.67
MDC1-202ENST00000416571 ZSCAN31Q96LW9 406 aaPredicted RBP10.85□□□□□ -0.67
MDC1-202ENST00000416571 MSTO1Q9BUK6 570 aa10.85□□□□□ -0.67
MDC1-202ENST00000416571 SLC46A2Q9BY10 475 aa10.85□□□□□ -0.67
MDC1-202ENST00000416571 EBF3Q9H4W6 596 aa10.85□□□□□ -0.67
MDC1-202ENST00000416571 KIF9Q9HAQ2 790 aa10.85□□□□□ -0.67
MDC1-202ENST00000416571 VPS45Q9NRW7 570 aa10.85□□□□□ -0.67
MDC1-202ENST00000416571 RXFP3Q9NSD7 469 aa10.85□□□□□ -0.67
MDC1-202ENST00000416571 ODF2LQ9ULJ1 636 aa10.85□□□□□ -0.67
MDC1-202ENST00000416571 TBX20Q9UMR3 447 aa10.85□□□□□ -0.67
MDC1-202ENST00000416571 CNOT1A5YKK6 2376 aaKnown RBP10.84□□□□□ -0.67
MDC1-202ENST00000416571 DENND4CQ5VZ89 1909 aa10.84□□□□□ -0.67
MDC1-202ENST00000416571 NPHP3-ACAD11A0A0J9YXS1 232 aa10.84□□□□□ -0.67
MDC1-202ENST00000416571 VWA3AA6NCI4 1184 aa10.84□□□□□ -0.67
MDC1-202ENST00000416571 FAM13AO94988 1023 aa10.84□□□□□ -0.67
MDC1-202ENST00000416571 KCNK5O95279 499 aa10.84□□□□□ -0.67
MDC1-202ENST00000416571 CYP11A1P05108 521 aa10.84□□□□□ -0.67
MDC1-202ENST00000416571 KRT18P05783 430 aaKnown RBP10.84□□□□□ -0.67
MDC1-202ENST00000416571 DRD1P21728 446 aa10.84□□□□□ -0.67
MDC1-202ENST00000416571 SCP2P22307 547 aa10.84□□□□□ -0.67
MDC1-202ENST00000416571 DDX6P26196 483 aaKnown RBP eCLIP10.84□□□□□ -0.67
MDC1-202ENST00000416571 TAF6P49848 677 aa10.84□□□□□ -0.67
MDC1-202ENST00000416571 SLC12A3P55017 1021 aa10.84□□□□□ -0.67
MDC1-202ENST00000416571 SHC2P98077 582 aa10.84□□□□□ -0.67
MDC1-202ENST00000416571 KARSQ15046 597 aaKnown RBP10.84□□□□□ -0.67
MDC1-202ENST00000416571 IL17AQ16552 155 aa10.84□□□□□ -0.67
MDC1-202ENST00000416571 HYIQ5T013 277 aa10.84□□□□□ -0.67
MDC1-202ENST00000416571 C9orf57Q5W0N0 161 aa10.84□□□□□ -0.67
MDC1-202ENST00000416571 TRIM68Q6AZZ1 485 aa10.84□□□□□ -0.67
MDC1-202ENST00000416571 MCTP1Q6DN14 999 aa10.84□□□□□ -0.67
MDC1-202ENST00000416571 FSTL4Q6MZW2 842 aa10.84□□□□□ -0.67
MDC1-202ENST00000416571 MYCT1Q8N699 235 aa10.84□□□□□ -0.67
MDC1-202ENST00000416571 MRPS31Q92665 395 aaKnown RBP10.84□□□□□ -0.67
MDC1-202ENST00000416571 ZC3H10Q96K80 434 aaKnown RBP10.84□□□□□ -0.67
MDC1-202ENST00000416571 PNMA5Q96PV4 448 aa10.84□□□□□ -0.67
MDC1-202ENST00000416571 FAM83CQ9BQN1 747 aa10.84□□□□□ -0.67
MDC1-202ENST00000416571 PYM1Q9BRP8 204 aaKnown RBP10.84□□□□□ -0.67
MDC1-202ENST00000416571 ZCWPW1Q9H0M4 648 aa10.84□□□□□ -0.67
MDC1-202ENST00000416571 SMOC1Q9H4F8 434 aa10.84□□□□□ -0.67
MDC1-202ENST00000416571 IL21Q9HBE4 155 aa10.84□□□□□ -0.67
MDC1-202ENST00000416571 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.84□□□□□ -0.67
MDC1-202ENST00000416571 ABI2Q9NYB9 513 aaPredicted RBP10.84□□□□□ -0.67
MDC1-202ENST00000416571 KIF3AQ9Y496 699 aa10.84□□□□□ -0.67
MDC1-202ENST00000416571 EML5Q05BV3 1969 aa10.84□□□□□ -0.67
MDC1-202ENST00000416571 ATG2BQ96BY7 2078 aa10.84□□□□□ -0.67
MDC1-202ENST00000416571 SDK1Q7Z5N4 2213 aa10.84□□□□□ -0.67
MDC1-202ENST00000416571 TULP1O00294 542 aaPredicted RBP10.83□□□□□ -0.68
MDC1-202ENST00000416571 PIRO00625 290 aa10.83□□□□□ -0.68
MDC1-202ENST00000416571 CYB561D2O14569 222 aa10.83□□□□□ -0.68
MDC1-202ENST00000416571 TRDMT1O14717 391 aaKnown RBP10.83□□□□□ -0.68
MDC1-202ENST00000416571 TM4SF5O14894 197 aa10.83□□□□□ -0.68
MDC1-202ENST00000416571 RHOBTB1O94844 696 aa10.83□□□□□ -0.68
MDC1-202ENST00000416571 EGFP01133 1207 aa10.83□□□□□ -0.68
MDC1-202ENST00000416571 NFICP08651 508 aa10.83□□□□□ -0.68
MDC1-202ENST00000416571 HAPLN1P10915 354 aaPredicted RBP10.83□□□□□ -0.68
MDC1-202ENST00000416571 NMT1P30419 496 aaKnown RBP10.83□□□□□ -0.68
MDC1-202ENST00000416571 GBP1P32455 592 aa10.83□□□□□ -0.68
MDC1-202ENST00000416571 ABCD1P33897 745 aa10.83□□□□□ -0.68
MDC1-202ENST00000416571 CREB5Q02930 508 aa10.83□□□□□ -0.68
MDC1-202ENST00000416571 PSMD2Q13200 908 aa10.83□□□□□ -0.68
MDC1-202ENST00000416571 DHX8Q14562 1220 aaKnown RBP10.83□□□□□ -0.68
MDC1-202ENST00000416571 PLK5Q496M5 336 aa10.83□□□□□ -0.68
MDC1-202ENST00000416571 FBXO43Q4G163 708 aa10.83□□□□□ -0.68
MDC1-202ENST00000416571 RILPL1Q5EBL4 403 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms