RNA–Protein interactions for RNA: ENST00000415107.5

ATG4B-207, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 356 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-207ENST00000415107 MMS19Q96T76 1030 aa12.74□□□□□ -0.37
ATG4B-207ENST00000415107 MRPL45Q9BRJ2 306 aaKnown RBP12.74□□□□□ -0.37
ATG4B-207ENST00000415107 PI4K2AQ9BTU6 479 aa12.74□□□□□ -0.37
ATG4B-207ENST00000415107 SMYD3Q9H7B4 428 aa12.74□□□□□ -0.37
ATG4B-207ENST00000415107 ABCB6Q9NP58 842 aa12.74□□□□□ -0.37
ATG4B-207ENST00000415107 PLCB1Q9NQ66 1216 aa12.74□□□□□ -0.37
ATG4B-207ENST00000415107 NXF1Q9UBU9 619 aaKnown RBP12.74□□□□□ -0.37
ATG4B-207ENST00000415107 APEX2Q9UBZ4 518 aa12.74□□□□□ -0.37
ATG4B-207ENST00000415107 BARX2Q9UMQ3 279 aaPredicted RBP12.74□□□□□ -0.37
ATG4B-207ENST00000415107 COG5Q9UP83 839 aa12.74□□□□□ -0.37
ATG4B-207ENST00000415107 NME7Q9Y5B8 376 aa12.74□□□□□ -0.37
ATG4B-207ENST00000415107 A0A1B0GTH6 734 aa12.73□□□□□ -0.37
ATG4B-207ENST00000415107 ADAM12O43184 909 aa12.73□□□□□ -0.37
ATG4B-207ENST00000415107 CILPO75339 1184 aa12.73□□□□□ -0.37
ATG4B-207ENST00000415107 ATP1A3P13637 1013 aa12.73□□□□□ -0.37
ATG4B-207ENST00000415107 RPL17P18621 184 aaKnown RBP12.73□□□□□ -0.37
ATG4B-207ENST00000415107 PON1P27169 355 aa12.73□□□□□ -0.37
ATG4B-207ENST00000415107 GNL1P36915 607 aaPredicted RBP12.73□□□□□ -0.37
ATG4B-207ENST00000415107 LTBRP36941 435 aa12.73□□□□□ -0.37
ATG4B-207ENST00000415107 CFAP221Q4G0U5 840 aa12.73□□□□□ -0.37
ATG4B-207ENST00000415107 HSP90AA4PQ58FG1 418 aa12.73□□□□□ -0.37
ATG4B-207ENST00000415107 DPY19L2P1Q6NXN4 242 aa12.73□□□□□ -0.37
ATG4B-207ENST00000415107 LUZP1Q86V48 1076 aa12.73□□□□□ -0.37
ATG4B-207ENST00000415107 CRYBG2Q8N1P7 616 aa12.73□□□□□ -0.37
ATG4B-207ENST00000415107 MICALL1Q8N3F8 863 aa12.73□□□□□ -0.37
ATG4B-207ENST00000415107 SPPL2BQ8TCT7 592 aa12.73□□□□□ -0.37
ATG4B-207ENST00000415107 MSLNLQ96KJ4 702 aa12.73□□□□□ -0.37
ATG4B-207ENST00000415107 TNIP3Q96KP6 325 aa12.73□□□□□ -0.37
ATG4B-207ENST00000415107 CEP295NLQ96MC4 621 aa12.73□□□□□ -0.37
ATG4B-207ENST00000415107 INTS2Q9H0H0 1204 aaKnown RBP12.73□□□□□ -0.37
ATG4B-207ENST00000415107 SDCBP2Q9H190 292 aa12.73□□□□□ -0.37
ATG4B-207ENST00000415107 ZDHHC7Q9NXF8 308 aa12.73□□□□□ -0.37
ATG4B-207ENST00000415107 TAB2Q9NYJ8 693 aa12.73□□□□□ -0.37
ATG4B-207ENST00000415107 POLIQ9UNA4 740 aa12.73□□□□□ -0.37
ATG4B-207ENST00000415107 CNTN6Q9UQ52 1028 aa12.73□□□□□ -0.37
ATG4B-207ENST00000415107 REV3LO60673 3130 aa12.72□□□□□ -0.37
ATG4B-207ENST00000415107 MTMR11A4FU01 709 aa12.72□□□□□ -0.37
ATG4B-207ENST00000415107 GOLGA6L19H0YKK7 550 aa12.72□□□□□ -0.37
ATG4B-207ENST00000415107 TULP1O00294 542 aaPredicted RBP12.72□□□□□ -0.37
ATG4B-207ENST00000415107 PER2O15055 1255 aa12.72□□□□□ -0.37
ATG4B-207ENST00000415107 TBX10O75333 385 aa12.72□□□□□ -0.37
ATG4B-207ENST00000415107 VNN2O95498 520 aa12.72□□□□□ -0.37
ATG4B-207ENST00000415107 HNRNPA1P09651 372 aaKnown RBP eCLIP12.72□□□□□ -0.37
ATG4B-207ENST00000415107 TRIM21P19474 475 aaKnown RBP12.72□□□□□ -0.37
ATG4B-207ENST00000415107 CDK11BP21127 795 aaKnown RBP12.72□□□□□ -0.37
ATG4B-207ENST00000415107 GTF2F1P35269 517 aaKnown RBP eCLIP12.72□□□□□ -0.372e-8■■■■■ 34.1
ATG4B-207ENST00000415107 KCNMA1Q12791 1236 aa12.72□□□□□ -0.37
ATG4B-207ENST00000415107 CCDC149Q6ZUS6 474 aa12.72□□□□□ -0.37
ATG4B-207ENST00000415107 B3GALNT2Q8NCR0 500 aa12.72□□□□□ -0.37
ATG4B-207ENST00000415107 KREMEN2Q8NCW0 462 aa12.72□□□□□ -0.37
ATG4B-207ENST00000415107 MYCBPAPQ8TBZ2 947 aa12.72□□□□□ -0.37
ATG4B-207ENST00000415107 TATDN2Q93075 761 aa12.72□□□□□ -0.37
ATG4B-207ENST00000415107 SYT15Q9BQS2 421 aa12.72□□□□□ -0.37
ATG4B-207ENST00000415107 DNAI2Q9GZS0 605 aa12.72□□□□□ -0.37
ATG4B-207ENST00000415107 SNX25Q9H3E2 840 aa12.72□□□□□ -0.37
ATG4B-207ENST00000415107 SFXN1Q9H9B4 322 aa12.72□□□□□ -0.37
ATG4B-207ENST00000415107 SIX2Q9NPC8 291 aa12.72□□□□□ -0.37
ATG4B-207ENST00000415107 MAN1C1Q9NR34 630 aa12.72□□□□□ -0.37
ATG4B-207ENST00000415107 CLEC1BQ9P126 229 aa12.72□□□□□ -0.37
ATG4B-207ENST00000415107 PTPRDP23468 1912 aa12.72□□□□□ -0.37
ATG4B-207ENST00000415107 A0A1W2PQC6 194 aa12.71□□□□□ -0.37
ATG4B-207ENST00000415107 A8MXQ7 604 aa12.71□□□□□ -0.37
ATG4B-207ENST00000415107 ZMYND10O75800 440 aa12.71□□□□□ -0.37
ATG4B-207ENST00000415107 CPB1P15086 417 aa12.71□□□□□ -0.37
ATG4B-207ENST00000415107 EPCAMP16422 314 aa12.71□□□□□ -0.37
ATG4B-207ENST00000415107 ACO1P21399 889 aaKnown RBP12.71□□□□□ -0.37
ATG4B-207ENST00000415107 LMO2P25791 158 aa12.71□□□□□ -0.37
ATG4B-207ENST00000415107 CA8P35219 290 aa12.71□□□□□ -0.37
ATG4B-207ENST00000415107 MAGEA11P43364 429 aa12.71□□□□□ -0.37
ATG4B-207ENST00000415107 ZNF132P52740 706 aa12.71□□□□□ -0.37
ATG4B-207ENST00000415107 CDH8P55286 799 aa12.71□□□□□ -0.37
ATG4B-207ENST00000415107 FKBP15Q5T1M5 1219 aa12.71□□□□□ -0.37
ATG4B-207ENST00000415107 PHLDB3Q6NSJ2 640 aa12.71□□□□□ -0.37
ATG4B-207ENST00000415107 ANKRD54Q6NXT1 300 aa12.71□□□□□ -0.37
ATG4B-207ENST00000415107 SCARA5Q6ZMJ2 495 aa12.71□□□□□ -0.37
ATG4B-207ENST00000415107 C4orf50Q6ZRC1 276 aa12.71□□□□□ -0.37
ATG4B-207ENST00000415107 RBM23Q86U06 439 aaKnown RBP12.71□□□□□ -0.37
ATG4B-207ENST00000415107 LRRTM3Q86VH5 581 aa12.71□□□□□ -0.37
ATG4B-207ENST00000415107 CREBRFQ8IUR6 639 aa12.71□□□□□ -0.37
ATG4B-207ENST00000415107 PPM1KQ8N3J5 372 aa12.71□□□□□ -0.37
ATG4B-207ENST00000415107 SMRP1Q8NCR6 262 aa12.71□□□□□ -0.37
ATG4B-207ENST00000415107 OR6B3Q8NGW1 331 aa12.71□□□□□ -0.37
ATG4B-207ENST00000415107 WHAMMQ8TF30 809 aa12.71□□□□□ -0.37
ATG4B-207ENST00000415107 TMEM209Q96SK2 561 aa12.71□□□□□ -0.37
ATG4B-207ENST00000415107 NT5C1AQ9BXI3 368 aa12.71□□□□□ -0.37
ATG4B-207ENST00000415107 VPS16Q9H269 839 aa12.71□□□□□ -0.37
ATG4B-207ENST00000415107 UBE2ZQ9H832 354 aaPredicted RBP12.71□□□□□ -0.37
ATG4B-207ENST00000415107 CRTAC1Q9NQ79 661 aa12.71□□□□□ -0.37
ATG4B-207ENST00000415107 RTN4Q9NQC3 1192 aaKnown RBP12.71□□□□□ -0.37
ATG4B-207ENST00000415107 CISHQ9NSE2 258 aa12.71□□□□□ -0.37
ATG4B-207ENST00000415107 CEP72Q9P209 647 aa12.71□□□□□ -0.37
ATG4B-207ENST00000415107 SIK3Q9Y2K2 1263 aa12.71□□□□□ -0.37
ATG4B-207ENST00000415107 EYSQ5T1H1 3165 aa12.71□□□□□ -0.37
ATG4B-207ENST00000415107 BRWD1Q9NSI6 2320 aa12.71□□□□□ -0.38
ATG4B-207ENST00000415107 LINC01565O15544 149 aa12.7□□□□□ -0.38
ATG4B-207ENST00000415107 CSPG5O95196 566 aa12.7□□□□□ -0.38
ATG4B-207ENST00000415107 C8AP07357 584 aa12.7□□□□□ -0.38
ATG4B-207ENST00000415107 PAEPP09466 180 aa12.7□□□□□ -0.38
ATG4B-207ENST00000415107 WEE2P0C1S8 567 aa12.7□□□□□ -0.38
ATG4B-207ENST00000415107 SLC9A1P19634 815 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms