RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 GBP6Q6ZN66 633 aa10.63□□□□□ -0.71
DDB1-202ENST00000414411 ZNF572Q7Z3I7 529 aaPredicted RBP10.63□□□□□ -0.71
DDB1-202ENST00000414411 LRRC43Q8N309 656 aa10.63□□□□□ -0.71
DDB1-202ENST00000414411 RNF10Q8N5U6 811 aaKnown RBP10.63□□□□□ -0.71
DDB1-202ENST00000414411 DDX27Q96GQ7 796 aaKnown RBP10.63□□□□□ -0.71
DDB1-202ENST00000414411 VRTNQ9H8Y1 702 aa10.63□□□□□ -0.71
DDB1-202ENST00000414411 LUC7LQ9NQ29 371 aaKnown RBP10.63□□□□□ -0.71
DDB1-202ENST00000414411 HCSTQ9UBK5 93 aa10.63□□□□□ -0.71
DDB1-202ENST00000414411 CACNG4Q9UBN1 327 aa10.63□□□□□ -0.71
DDB1-202ENST00000414411 DNAJB4Q9UDY4 337 aa10.63□□□□□ -0.71
DDB1-202ENST00000414411 AGAP1Q9UPQ3 857 aa10.63□□□□□ -0.71
DDB1-202ENST00000414411 TRANK1O15050 2925 aa10.63□□□□□ -0.71
DDB1-202ENST00000414411 CASTOR2A6NHX0 329 aa10.62□□□□□ -0.71
DDB1-202ENST00000414411 PHACTR2O75167 634 aa10.62□□□□□ -0.71
DDB1-202ENST00000414411 STAU1O95793 577 aaKnown RBP10.62□□□□□ -0.71
DDB1-202ENST00000414411 ASS1P00966 412 aaKnown RBP10.62□□□□□ -0.71
DDB1-202ENST00000414411 MCM3P25205 808 aa10.62□□□□□ -0.71
DDB1-202ENST00000414411 POLR2BP30876 1174 aaKnown RBP10.62□□□□□ -0.71
DDB1-202ENST00000414411 LILRA4P59901 499 aa10.62□□□□□ -0.71
DDB1-202ENST00000414411 ITIH3Q06033 890 aa10.62□□□□□ -0.71
DDB1-202ENST00000414411 SLC18A3Q16572 532 aa10.62□□□□□ -0.71
DDB1-202ENST00000414411 EXOC3L4Q17RC7 722 aa10.62□□□□□ -0.71
DDB1-202ENST00000414411 SGSM1Q2NKQ1 1148 aa10.62□□□□□ -0.71
DDB1-202ENST00000414411 PAN2Q504Q3 1202 aaKnown RBP10.62□□□□□ -0.71
DDB1-202ENST00000414411 CREG2Q8IUH2 290 aa10.62□□□□□ -0.71
DDB1-202ENST00000414411 LRRC52Q8N7C0 313 aa10.62□□□□□ -0.71
DDB1-202ENST00000414411 C3orf58Q8NDZ4 430 aa10.62□□□□□ -0.71
DDB1-202ENST00000414411 UROC1Q96N76 676 aa10.62□□□□□ -0.71
DDB1-202ENST00000414411 NOX5Q96PH1 765 aa10.62□□□□□ -0.71
DDB1-202ENST00000414411 YME1L1Q96TA2 773 aa10.62□□□□□ -0.71
DDB1-202ENST00000414411 ZBED2Q9BTP6 218 aa10.62□□□□□ -0.71
DDB1-202ENST00000414411 IGSF5Q9NSI5 407 aa10.62□□□□□ -0.71
DDB1-202ENST00000414411 HYOU1Q9Y4L1 999 aa10.62□□□□□ -0.71
DDB1-202ENST00000414411 GRXCR1A8MXD5 290 aa10.62□□□□□ -0.71
DDB1-202ENST00000414411 PODXLO00592 558 aa10.62□□□□□ -0.71
DDB1-202ENST00000414411 ALDH2P05091 517 aa10.62□□□□□ -0.71
DDB1-202ENST00000414411 GALTP07902 379 aa10.62□□□□□ -0.71
DDB1-202ENST00000414411 UCHL3P15374 230 aa10.62□□□□□ -0.71
DDB1-202ENST00000414411 TCP1P17987 556 aaKnown RBP10.62□□□□□ -0.71
DDB1-202ENST00000414411 ATICP31939 592 aa10.62□□□□□ -0.71
DDB1-202ENST00000414411 TIE1P35590 1138 aa10.62□□□□□ -0.71
DDB1-202ENST00000414411 KLHL30Q0D2K2 578 aa10.62□□□□□ -0.71
DDB1-202ENST00000414411 TRPC3Q13507 836 aa10.62□□□□□ -0.71
DDB1-202ENST00000414411 BTG3Q14201 252 aaPredicted RBP10.62□□□□□ -0.71
DDB1-202ENST00000414411 ASIC2Q16515 512 aa10.62□□□□□ -0.71
DDB1-202ENST00000414411 DCLRE1AQ6PJP8 1040 aa10.62□□□□□ -0.71
DDB1-202ENST00000414411 ZNF771Q7L3S4 317 aaPredicted RBP10.62□□□□□ -0.71
DDB1-202ENST00000414411 COG1Q8WTW3 980 aa10.62□□□□□ -0.71
DDB1-202ENST00000414411 TAF4BQ92750 862 aa10.62□□□□□ -0.71
DDB1-202ENST00000414411 CLP1Q92989 425 aaKnown RBP10.62□□□□□ -0.71
DDB1-202ENST00000414411 HPDLQ96IR7 371 aa10.62□□□□□ -0.71
DDB1-202ENST00000414411 FAM193BQ96PV7 902 aaPredicted RBP10.62□□□□□ -0.71
DDB1-202ENST00000414411 OSBPL9Q96SU4 736 aa10.62□□□□□ -0.71
DDB1-202ENST00000414411 TMEM175Q9BSA9 504 aa10.62□□□□□ -0.71
DDB1-202ENST00000414411 PI4K2AQ9BTU6 479 aa10.62□□□□□ -0.71
DDB1-202ENST00000414411 APOBEC3GQ9HC16 384 aaKnown RBP10.62□□□□□ -0.71
DDB1-202ENST00000414411 SIX2Q9NPC8 291 aa10.62□□□□□ -0.71
DDB1-202ENST00000414411 GCNT4Q9P109 453 aa10.62□□□□□ -0.71
DDB1-202ENST00000414411 MRPL42Q9Y6G3 142 aaKnown RBP10.62□□□□□ -0.71
DDB1-202ENST00000414411 A0A087X0T9 212 aa10.61□□□□□ -0.71
DDB1-202ENST00000414411 TMEM189-UBE2V1I3L0A0 370 aa10.61□□□□□ -0.71
DDB1-202ENST00000414411 NRP1O14786 923 aa10.61□□□□□ -0.71
DDB1-202ENST00000414411 SPTLC1O15269 473 aa10.61□□□□□ -0.71
DDB1-202ENST00000414411 TLL1O43897 1013 aa10.61□□□□□ -0.71
DDB1-202ENST00000414411 ZC3H11AO75152 810 aaKnown RBP eCLIP10.61□□□□□ -0.71
DDB1-202ENST00000414411 EFEMP2O95967 443 aa10.61□□□□□ -0.71
DDB1-202ENST00000414411 KRT19P08727 400 aa10.61□□□□□ -0.71
DDB1-202ENST00000414411 FAM228BP0C875 321 aa10.61□□□□□ -0.71
DDB1-202ENST00000414411 PNPLA4P41247 253 aa10.61□□□□□ -0.71
DDB1-202ENST00000414411 SLC11A1P49279 550 aa10.61□□□□□ -0.71
DDB1-202ENST00000414411 AARSP49588 968 aaKnown RBP eCLIP10.61□□□□□ -0.71
DDB1-202ENST00000414411 CASP8Q14790 479 aa10.61□□□□□ -0.71
DDB1-202ENST00000414411 KLHDC7AQ5VTJ3 777 aa10.61□□□□□ -0.71
DDB1-202ENST00000414411 PHLDB3Q6NSJ2 640 aa10.61□□□□□ -0.71
DDB1-202ENST00000414411 TATDN2Q93075 761 aa10.61□□□□□ -0.71
DDB1-202ENST00000414411 ELMO3Q96BJ8 720 aa10.61□□□□□ -0.71
DDB1-202ENST00000414411 INTS2Q9H0H0 1204 aaKnown RBP10.61□□□□□ -0.71
DDB1-202ENST00000414411 GDAP2Q9NXN4 497 aa10.61□□□□□ -0.71
DDB1-202ENST00000414411 FBXL5Q9UKA1 691 aa10.61□□□□□ -0.71
DDB1-202ENST00000414411 NUB1Q9Y5A7 615 aa10.61□□□□□ -0.71
DDB1-202ENST00000414411 TRIOBPQ9H2D6 2365 aa10.61□□□□□ -0.71
DDB1-202ENST00000414411 GBF1Q92538 1859 aa10.61□□□□□ -0.71
DDB1-202ENST00000414411 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.6□□□□□ -0.71
DDB1-202ENST00000414411 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.6□□□□□ -0.71
DDB1-202ENST00000414411 LCHNA4D1U4 455 aa10.6□□□□□ -0.71
DDB1-202ENST00000414411 F8W810 466 aa10.6□□□□□ -0.71
DDB1-202ENST00000414411 H3BQF6 201 aa10.6□□□□□ -0.71
DDB1-202ENST00000414411 POLR3GO15318 223 aaPredicted RBP10.6□□□□□ -0.71
DDB1-202ENST00000414411 BUB1O43683 1085 aa10.6□□□□□ -0.71
DDB1-202ENST00000414411 B3GAT3O94766 335 aa10.6□□□□□ -0.71
DDB1-202ENST00000414411 ITGB1P05556 798 aa10.6□□□□□ -0.71
DDB1-202ENST00000414411 PAX3P23760 479 aa10.6□□□□□ -0.71
DDB1-202ENST00000414411 PIK3CAP42336 1068 aa10.6□□□□□ -0.71
DDB1-202ENST00000414411 RABGGTBP53611 331 aa10.6□□□□□ -0.71
DDB1-202ENST00000414411 BCAR1P56945 870 aa10.6□□□□□ -0.71
DDB1-202ENST00000414411 ARID5AQ03989 594 aa10.6□□□□□ -0.71
DDB1-202ENST00000414411 C2orf54Q08AI8 447 aa10.6□□□□□ -0.71
DDB1-202ENST00000414411 WDR72Q3MJ13 1102 aa10.6□□□□□ -0.71
DDB1-202ENST00000414411 SPOPLQ6IQ16 392 aa10.6□□□□□ -0.71
DDB1-202ENST00000414411 LIMS2Q7Z4I7 341 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms