RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 GNL1P36915 607 aaPredicted RBP15.75■□□□□ 0.11
CHD1-202ENST00000414220 MYL6P60660 151 aa15.75■□□□□ 0.11
CHD1-202ENST00000414220 DLG4P78352 724 aa15.75■□□□□ 0.11
CHD1-202ENST00000414220 CETN1Q12798 172 aa15.75■□□□□ 0.11
CHD1-202ENST00000414220 SOWAHAQ2M3V2 549 aa15.75■□□□□ 0.11
CHD1-202ENST00000414220 CCDC40Q4G0X9 1142 aa15.75■□□□□ 0.11
CHD1-202ENST00000414220 INTS6LQ5JSJ4 861 aaKnown RBP15.75■□□□□ 0.11
CHD1-202ENST00000414220 C4orf50Q6ZRC1 276 aa15.75■□□□□ 0.11
CHD1-202ENST00000414220 PDZD4Q76G19 769 aaPredicted RBP15.75■□□□□ 0.11
CHD1-202ENST00000414220 SV2AQ7L0J3 742 aa15.75■□□□□ 0.11
CHD1-202ENST00000414220 GET4Q7L5D6 327 aaPredicted RBP15.75■□□□□ 0.11
CHD1-202ENST00000414220 FILIP1Q7Z7B0 1213 aa15.75■□□□□ 0.11
CHD1-202ENST00000414220 MLKLQ8NB16 471 aa15.75■□□□□ 0.11
CHD1-202ENST00000414220 OR6B3Q8NGW1 331 aa15.75■□□□□ 0.11
CHD1-202ENST00000414220 OR10T2Q8NGX3 314 aa15.75■□□□□ 0.11
CHD1-202ENST00000414220 PLEKHO2Q8TD55 490 aa15.75■□□□□ 0.11
CHD1-202ENST00000414220 SEPT5Q99719 369 aaPredicted RBP15.75■□□□□ 0.11
CHD1-202ENST00000414220 MMRN2Q9H8L6 949 aa15.75■□□□□ 0.11
CHD1-202ENST00000414220 TMEM8AQ9HCN3 771 aa15.75■□□□□ 0.11
CHD1-202ENST00000414220 CDH22Q9UJ99 828 aa15.75■□□□□ 0.11
CHD1-202ENST00000414220 CTNND2Q9UQB3 1225 aa15.75■□□□□ 0.11
CHD1-202ENST00000414220 MRPS23Q9Y3D9 190 aaKnown RBP15.75■□□□□ 0.11
CHD1-202ENST00000414220 YIPF1Q9Y548 306 aa15.75■□□□□ 0.11
CHD1-202ENST00000414220 PPP1R3GB7ZBB8 358 aa15.74■□□□□ 0.11
CHD1-202ENST00000414220 GABRDO14764 452 aa15.74■□□□□ 0.11
CHD1-202ENST00000414220 FGF19O95750 216 aa15.74■□□□□ 0.11
CHD1-202ENST00000414220 MBD3O95983 291 aa15.74■□□□□ 0.11
CHD1-202ENST00000414220 GCLMP48507 274 aa15.74■□□□□ 0.11
CHD1-202ENST00000414220 DCAF17Q5H9S7 520 aaPredicted RBP15.74■□□□□ 0.11
CHD1-202ENST00000414220 FRMD5Q7Z6J6 570 aa15.74■□□□□ 0.11
CHD1-202ENST00000414220 SPATA2LQ8IUW3 424 aaPredicted RBP15.74■□□□□ 0.11
CHD1-202ENST00000414220 ATAD1Q8NBU5 361 aa15.74■□□□□ 0.11
CHD1-202ENST00000414220 NXPE3Q969Y0 559 aa15.74■□□□□ 0.11
CHD1-202ENST00000414220 CORO1BQ9BR76 489 aa15.74■□□□□ 0.11
CHD1-202ENST00000414220 C1QTNF1Q9BXJ1 281 aa15.74■□□□□ 0.11
CHD1-202ENST00000414220 GZF1Q9H116 711 aaPredicted RBP15.74■□□□□ 0.11
CHD1-202ENST00000414220 CD320Q9NPF0 282 aa15.74■□□□□ 0.11
CHD1-202ENST00000414220 AVENQ9NQS1 362 aaPredicted RBP15.74■□□□□ 0.11
CHD1-202ENST00000414220 ASAH2Q9NR71 780 aa15.74■□□□□ 0.11
CHD1-202ENST00000414220 ABI2Q9NYB9 513 aaPredicted RBP15.74■□□□□ 0.11
CHD1-202ENST00000414220 IGSF9Q9P2J2 1179 aa15.74■□□□□ 0.11
CHD1-202ENST00000414220 SLC27A5Q9Y2P5 690 aa15.74■□□□□ 0.11
CHD1-202ENST00000414220 XIRP2A4UGR9 3374 aa15.73■□□□□ 0.11
CHD1-202ENST00000414220 TRIM49BA6NDI0 452 aa15.73■□□□□ 0.11
CHD1-202ENST00000414220 A8MXQ7 604 aa15.73■□□□□ 0.11
CHD1-202ENST00000414220 PI4K2BG5E9Z4 385 aa15.73■□□□□ 0.11
CHD1-202ENST00000414220 HLA-DRAP01903 254 aa15.73■□□□□ 0.11
CHD1-202ENST00000414220 RHOP08100 348 aa15.73■□□□□ 0.11
CHD1-202ENST00000414220 TRIM49P0CI25 452 aa15.73■□□□□ 0.11
CHD1-202ENST00000414220 TRIM49CP0CI26 452 aa15.73■□□□□ 0.11
CHD1-202ENST00000414220 MXI1P50539 228 aa15.73■□□□□ 0.11
CHD1-202ENST00000414220 RPL10AP62906 217 aaKnown RBP15.73■□□□□ 0.11
CHD1-202ENST00000414220 TPD52L1Q16890 204 aaPredicted RBP15.73■□□□□ 0.11
CHD1-202ENST00000414220 WDR44Q5JSH3 913 aa15.73■□□□□ 0.11
CHD1-202ENST00000414220 ZC3H3Q8IXZ2 948 aaKnown RBP15.73■□□□□ 0.11
CHD1-202ENST00000414220 TTC39CQ8N584 583 aa15.73■□□□□ 0.11
CHD1-202ENST00000414220 EEF2KMTQ96G04 330 aa15.73■□□□□ 0.11
CHD1-202ENST00000414220 FUBP3Q96I24 572 aaKnown RBP eCLIP15.73■□□□□ 0.11
CHD1-202ENST00000414220 TNIP3Q96KP6 325 aa15.73■□□□□ 0.11
CHD1-202ENST00000414220 TMEM209Q96SK2 561 aa15.73■□□□□ 0.11
CHD1-202ENST00000414220 RTP3Q9BQQ7 232 aa15.73■□□□□ 0.11
CHD1-202ENST00000414220 SYT15Q9BQS2 421 aa15.73■□□□□ 0.11
CHD1-202ENST00000414220 ABCB6Q9NP58 842 aa15.73■□□□□ 0.11
CHD1-202ENST00000414220 DNMT3BQ9UBC3 853 aaKnown RBP15.73■□□□□ 0.11
CHD1-202ENST00000414220 MAGEC2Q9UBF1 373 aaPredicted RBP15.73■□□□□ 0.11
CHD1-202ENST00000414220 LIMD1Q9UGP4 676 aa15.73■□□□□ 0.11
CHD1-202ENST00000414220 CDH7Q9ULB5 785 aa15.73■□□□□ 0.11
CHD1-202ENST00000414220 PLXNA3P51805 1871 aa15.73■□□□□ 0.11
CHD1-202ENST00000414220 MTCL1Q9Y4B5 1905 aaKnown RBP15.72■□□□□ 0.11
CHD1-202ENST00000414220 SCN1AP35498 2009 aa15.72■□□□□ 0.11
CHD1-202ENST00000414220 N4BP1O75113 896 aaKnown RBP15.72■□□□□ 0.11
CHD1-202ENST00000414220 MICAL2O94851 1124 aa15.72■□□□□ 0.11
CHD1-202ENST00000414220 PDGFRBP09619 1106 aa15.72■□□□□ 0.11
CHD1-202ENST00000414220 CCDC192P0DO97 292 aa15.72■□□□□ 0.11
CHD1-202ENST00000414220 CD44P16070 742 aaKnown RBP15.72■□□□□ 0.11
CHD1-202ENST00000414220 ACAT1P24752 427 aaKnown RBP15.72■□□□□ 0.11
CHD1-202ENST00000414220 PMS1P54277 932 aaKnown RBP15.72■□□□□ 0.11
CHD1-202ENST00000414220 MTMR3Q13615 1198 aa15.72■□□□□ 0.11
CHD1-202ENST00000414220 MTSS1LQ765P7 747 aa15.72■□□□□ 0.11
CHD1-202ENST00000414220 LIMS2Q7Z4I7 341 aa15.72■□□□□ 0.11
CHD1-202ENST00000414220 FBXL13Q8NEE6 735 aa15.72■□□□□ 0.11
CHD1-202ENST00000414220 FAXDC2Q96IV6 333 aa15.72■□□□□ 0.11
CHD1-202ENST00000414220 GCNAQ96QF7 691 aa15.72■□□□□ 0.11
CHD1-202ENST00000414220 GPR88Q9GZN0 384 aa15.72■□□□□ 0.11
CHD1-202ENST00000414220 XYLT2Q9H1B5 865 aa15.72■□□□□ 0.11
CHD1-202ENST00000414220 EPS15L1Q9UBC2 864 aa15.72■□□□□ 0.11
CHD1-202ENST00000414220 MUTYHQ9UIF7 546 aa15.72■□□□□ 0.11
CHD1-202ENST00000414220 RWDD2AQ9UIY3 292 aa15.72■□□□□ 0.11
CHD1-202ENST00000414220 GTF3C4Q9UKN8 822 aa15.72■□□□□ 0.11
CHD1-202ENST00000414220 A0A0C4DFX4 3053 aa15.71■□□□□ 0.11
CHD1-202ENST00000414220 VNN1O95497 513 aa15.71■□□□□ 0.11
CHD1-202ENST00000414220 ASS1P00966 412 aaKnown RBP15.71■□□□□ 0.11
CHD1-202ENST00000414220 HAPLN1P10915 354 aaPredicted RBP15.71■□□□□ 0.11
CHD1-202ENST00000414220 MYL4P12829 197 aa15.71■□□□□ 0.11
CHD1-202ENST00000414220 LAMP2P13473 410 aa15.71■□□□□ 0.11
CHD1-202ENST00000414220 STX17P56962 302 aa15.71■□□□□ 0.11
CHD1-202ENST00000414220 MCCD1P59942 119 aaPredicted RBP15.71■□□□□ 0.11
CHD1-202ENST00000414220 PPP3CAQ08209 521 aa15.71■□□□□ 0.11
CHD1-202ENST00000414220 PTPN21Q16825 1174 aa15.71■□□□□ 0.11
CHD1-202ENST00000414220 SCARA3Q6AZY7 606 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms