RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 L1RE1Q9UN81 338 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 SCAF8Q9UPN6 1271 aaKnown RBP3.9□□□□□ -1.79
SF3B1-203ENST00000414174 MYRFQ9Y2G1 1151 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 TIMM22Q9Y584 194 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 KCTD3Q9Y597 815 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 ATP6V1DQ9Y5K8 247 aa3.9□□□□□ -1.79
SF3B1-203ENST00000414174 IQANK1A0A1B0GTG1 560 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 SHISA3A0PJX4 238 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 LCHNA4D1U4 455 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 FAM83GA6ND36 823 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 OTOL1A6NHN0 477 aaPredicted RBP3.89□□□□□ -1.79
SF3B1-203ENST00000414174 LRRIQ4A6NIV6 560 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 ACOD1A6NK06 481 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 H0YIV9 168 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 K7EPI3 171 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 NDUFAB1O14561 156 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 MAGEB3O15480 346 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 ASAP2O43150 1006 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 PRPSAP2O60256 369 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 NOL3O60936 208 aaKnown RBP3.89□□□□□ -1.79
SF3B1-203ENST00000414174 SEC22BO75396 215 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 SGPL1O95470 568 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 NPTXRO95502 500 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 STARD3NLO95772 234 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 ECDO95905 644 aaPredicted RBP3.89□□□□□ -1.79
SF3B1-203ENST00000414174 HPXP02790 462 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 S100A9P06702 114 aaKnown RBP3.89□□□□□ -1.79
SF3B1-203ENST00000414174 PDHBP11177 359 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 ACTN1P12814 892 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 RAG1P15918 1043 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 ALOX12P18054 663 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 HLA-DPA1P20036 260 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 CDH3P22223 829 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 KELP23276 732 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 MC4RP32245 332 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 HNF1BP35680 557 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 MSH2P43246 934 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 CRKP46108 304 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 MAPKAPK2P49137 400 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 HNMTP50135 292 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 YARSP54577 528 aaKnown RBP3.89□□□□□ -1.79
SF3B1-203ENST00000414174 HAND2P61296 217 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 HTD2P86397 168 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 FOXO1Q12778 655 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 SNAPC2Q13487 334 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 MTX1Q13505 466 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 CRYMQ14894 314 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 NOLC1Q14978 699 aaKnown RBP eCLIP3.89□□□□□ -1.79
SF3B1-203ENST00000414174 NAA25Q14CX7 972 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 DHCR24Q15392 516 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 MAPRE2Q15555 327 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 MAPKAPK3Q16644 382 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 CCDC40Q4G0X9 1142 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 DGKKQ5KSL6 1271 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 ZBTB41Q5SVQ8 909 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 RNASEH2BQ5TBB1 312 aaKnown RBP3.89□□□□□ -1.79
SF3B1-203ENST00000414174 THOC7Q6I9Y2 204 aaKnown RBP3.89□□□□□ -1.79
SF3B1-203ENST00000414174 LRSAM1Q6UWE0 723 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 NCCRP1Q6ZVX7 275 aaPredicted RBP3.89□□□□□ -1.79
SF3B1-203ENST00000414174 REC114Q7Z4M0 266 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 SESTD1Q86VW0 696 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 OSTM1Q86WC4 334 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 IRF2BP1Q8IU81 584 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 WDR49Q8IV35 697 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 KIAA0319LQ8IZA0 1049 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 ANKRD35Q8N283 1001 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 PPM1KQ8N3J5 372 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 ARL14Q8N4G2 192 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 RNF10Q8N5U6 811 aaKnown RBP3.89□□□□□ -1.79
SF3B1-203ENST00000414174 PPM1NQ8N819 430 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 GOLM1Q8NBJ4 401 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 KCNH5Q8NCM2 988 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 OR56B2PQ8NGI1 322 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 NPLOC4Q8TAT6 608 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 FAM81AQ8TBF8 368 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 PIWIL2Q8TC59 973 aaKnown RBP3.89□□□□□ -1.79
SF3B1-203ENST00000414174 RAPGEF5Q92565 580 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 NCLNQ969V3 563 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 VWCEQ96DN2 955 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 C19orf60Q96EN9 201 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 C11orf24Q96F05 449 aaPredicted RBP3.89□□□□□ -1.79
SF3B1-203ENST00000414174 COX4I2Q96KJ9 171 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 CCDC43Q96MW1 224 aaKnown RBP3.89□□□□□ -1.79
SF3B1-203ENST00000414174 RUNDC3BQ96NL0 473 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 ACAT2Q9BWD1 397 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 UPF3BQ9BZI7 483 aaKnown RBP3.89□□□□□ -1.79
SF3B1-203ENST00000414174 NYXQ9GZU5 481 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 GHITMQ9H3K2 345 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 TTC12Q9H892 705 aaPredicted RBP3.89□□□□□ -1.79
SF3B1-203ENST00000414174 CLK4Q9HAZ1 481 aaKnown RBP3.89□□□□□ -1.79
SF3B1-203ENST00000414174 HPS4Q9NQG7 708 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 VPS45Q9NRW7 570 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 TOMM22Q9NS69 142 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 OLA1Q9NTK5 396 aaKnown RBP3.89□□□□□ -1.79
SF3B1-203ENST00000414174 INTS7Q9NVH2 962 aaKnown RBP3.89□□□□□ -1.79
SF3B1-203ENST00000414174 GGA3Q9NZ52 723 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 SUCLA2Q9P2R7 463 aaPredicted RBP3.89□□□□□ -1.79
SF3B1-203ENST00000414174 MBD2Q9UBB5 411 aa3.89□□□□□ -1.79
SF3B1-203ENST00000414174 ORC3Q9UBD5 711 aaPredicted RBP3.89□□□□□ -1.79
SF3B1-203ENST00000414174 AASSQ9UDR5 926 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms