RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 PKN1Q16512 942 aa18.07■□□□□ 0.48
PHRF1-202ENST00000413872 IL17RBQ9NRM6 502 aa18.07■□□□□ 0.48
PHRF1-202ENST00000413872 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.07■□□□□ 0.48
PHRF1-202ENST00000413872 MROH1Q8NDA8 1641 aa18.07■□□□□ 0.48
PHRF1-202ENST00000413872 CARNS1A5YM72 827 aa18.06■□□□□ 0.48
PHRF1-202ENST00000413872 CHUKO15111 745 aa18.06■□□□□ 0.48
PHRF1-202ENST00000413872 ATXN8OSP0DMR3 200 aa18.06■□□□□ 0.48
PHRF1-202ENST00000413872 GZMAP12544 262 aa18.06■□□□□ 0.48
PHRF1-202ENST00000413872 SPRP35270 261 aaPredicted RBP18.06■□□□□ 0.48
PHRF1-202ENST00000413872 TOB1P50616 345 aaPredicted RBP18.06■□□□□ 0.48
PHRF1-202ENST00000413872 GLRA4Q5JXX5 417 aa18.06■□□□□ 0.48
PHRF1-202ENST00000413872 HIBCHQ6NVY1 386 aaPredicted RBP18.06■□□□□ 0.48
PHRF1-202ENST00000413872 SZRD1Q7Z422 152 aa18.06■□□□□ 0.48
PHRF1-202ENST00000413872 ADGRF2Q8IZF7 708 aa18.06■□□□□ 0.48
PHRF1-202ENST00000413872 USP33Q8TEY7 942 aa18.06■□□□□ 0.48
PHRF1-202ENST00000413872 TEX12Q9BXU0 123 aa18.06■□□□□ 0.48
PHRF1-202ENST00000413872 GTPBP10A4D1E9 387 aaKnown RBP18.06■□□□□ 0.48
PHRF1-202ENST00000413872 KDM1AO60341 852 aa18.06■□□□□ 0.48
PHRF1-202ENST00000413872 LSM8O95777 96 aaKnown RBP18.06■□□□□ 0.48
PHRF1-202ENST00000413872 POLBP06746 335 aa18.06■□□□□ 0.48
PHRF1-202ENST00000413872 PON1P27169 355 aa18.06■□□□□ 0.48
PHRF1-202ENST00000413872 LAMTOR4Q0VGL1 99 aa18.06■□□□□ 0.48
PHRF1-202ENST00000413872 E4F1Q66K89 784 aaPredicted RBP18.06■□□□□ 0.48
PHRF1-202ENST00000413872 PGBD3Q8N328 593 aa18.06■□□□□ 0.48
PHRF1-202ENST00000413872 UCMAQ8WVF2 138 aa18.06■□□□□ 0.48
PHRF1-202ENST00000413872 WDCPQ9H6R7 721 aa18.06■□□□□ 0.48
PHRF1-202ENST00000413872 DDIT4Q9NX09 232 aa18.06■□□□□ 0.48
PHRF1-202ENST00000413872 VTNP04004 478 aa18.06■□□□□ 0.48
PHRF1-202ENST00000413872 GRIK4Q16099 956 aa18.06■□□□□ 0.48
PHRF1-202ENST00000413872 RABGAP1LQ5R372 815 aa18.06■□□□□ 0.48
PHRF1-202ENST00000413872 LRRC37BQ96QE4 947 aa18.06■□□□□ 0.48
PHRF1-202ENST00000413872 P2RX7Q99572 595 aaKnown RBP18.06■□□□□ 0.48
PHRF1-202ENST00000413872 KRT82Q9NSB4 513 aa18.06■□□□□ 0.48
PHRF1-202ENST00000413872 ITGA11Q9UKX5 1188 aa18.06■□□□□ 0.48
PHRF1-202ENST00000413872 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.06■□□□□ 0.48
PHRF1-202ENST00000413872 INSRRP14616 1297 aa18.06■□□□□ 0.48
PHRF1-202ENST00000413872 ACO1P21399 889 aaKnown RBP18.06■□□□□ 0.48
PHRF1-202ENST00000413872 HSPA9P38646 679 aaKnown RBP18.06■□□□□ 0.48
PHRF1-202ENST00000413872 ZNF177Q13360 481 aaPredicted RBP18.06■□□□□ 0.48
PHRF1-202ENST00000413872 IQSEC1Q6DN90 963 aa18.06■□□□□ 0.48
PHRF1-202ENST00000413872 LRIG3Q6UXM1 1119 aa18.06■□□□□ 0.48
PHRF1-202ENST00000413872 LRRC1Q9BTT6 524 aa18.06■□□□□ 0.48
PHRF1-202ENST00000413872 ASPSCR1Q9BZE9 553 aa18.06■□□□□ 0.48
PHRF1-202ENST00000413872 WWP1Q9H0M0 922 aa18.06■□□□□ 0.48
PHRF1-202ENST00000413872 A0A087WZ62 844 aa18.06■□□□□ 0.48
PHRF1-202ENST00000413872 PPFIA2O75334 1257 aa18.06■□□□□ 0.48
PHRF1-202ENST00000413872 KCNA2P16389 499 aa18.06■□□□□ 0.48
PHRF1-202ENST00000413872 EPHB2P29323 1055 aa18.06■□□□□ 0.48
PHRF1-202ENST00000413872 CYP24A1Q07973 514 aa18.06■□□□□ 0.48
PHRF1-202ENST00000413872 CAPRIN1Q14444 709 aaKnown RBP18.06■□□□□ 0.48
PHRF1-202ENST00000413872 MTFR1Q15390 333 aa18.06■□□□□ 0.48
PHRF1-202ENST00000413872 RBBP7Q16576 425 aa18.06■□□□□ 0.48
PHRF1-202ENST00000413872 CENPPQ6IPU0 288 aa18.06■□□□□ 0.48
PHRF1-202ENST00000413872 ZNF410Q86VK4 478 aa18.06■□□□□ 0.48
PHRF1-202ENST00000413872 GSPT2Q8IYD1 628 aaKnown RBP18.06■□□□□ 0.48
PHRF1-202ENST00000413872 MTBPQ96DY7 904 aa18.06■□□□□ 0.48
PHRF1-202ENST00000413872 FDXACB1Q9BRP7 624 aaPredicted RBP18.06■□□□□ 0.48
PHRF1-202ENST00000413872 CPSF2Q9P2I0 782 aaKnown RBP18.06■□□□□ 0.48
PHRF1-202ENST00000413872 DNAJC8O75937 253 aaPredicted RBP18.05■□□□□ 0.48
PHRF1-202ENST00000413872 TWF1Q12792 350 aa18.05■□□□□ 0.48
PHRF1-202ENST00000413872 PTK6Q13882 451 aa18.05■□□□□ 0.48
PHRF1-202ENST00000413872 RAD9BQ6WBX8 426 aa18.05■□□□□ 0.48
PHRF1-202ENST00000413872 ANKS3Q6ZW76 656 aa18.05■□□□□ 0.48
PHRF1-202ENST00000413872 SHCBP1Q8NEM2 672 aa18.05■□□□□ 0.48
PHRF1-202ENST00000413872 REPS2Q8NFH8 660 aa18.05■□□□□ 0.48
PHRF1-202ENST00000413872 YME1L1Q96TA2 773 aa18.05■□□□□ 0.48
PHRF1-202ENST00000413872 CBWD1Q9BRT8 395 aa18.05■□□□□ 0.48
PHRF1-202ENST00000413872 TRABDQ9H4I3 376 aa18.05■□□□□ 0.48
PHRF1-202ENST00000413872 XAB2Q9HCS7 855 aaKnown RBP18.05■□□□□ 0.48
PHRF1-202ENST00000413872 DDX4Q9NQI0 724 aaKnown RBP18.05■□□□□ 0.48
PHRF1-202ENST00000413872 FDFT1P37268 417 aa18.05■□□□□ 0.48
PHRF1-202ENST00000413872 MTA1Q13330 715 aa18.05■□□□□ 0.48
PHRF1-202ENST00000413872 CDH18Q13634 790 aa18.05■□□□□ 0.48
PHRF1-202ENST00000413872 PDK2Q15119 407 aa18.05■□□□□ 0.48
PHRF1-202ENST00000413872 CTXN3Q4LDR2 81 aa18.05■□□□□ 0.48
PHRF1-202ENST00000413872 ANKMY2Q8IV38 441 aa18.05■□□□□ 0.48
PHRF1-202ENST00000413872 FBXO32Q969P5 355 aa18.05■□□□□ 0.48
PHRF1-202ENST00000413872 M0QYT0 321 aa18.05■□□□□ 0.48
PHRF1-202ENST00000413872 ADORA2AP29274 412 aa18.05■□□□□ 0.48
PHRF1-202ENST00000413872 ETFBP38117 255 aa18.05■□□□□ 0.48
PHRF1-202ENST00000413872 NT5DC4Q86YG4 428 aa18.05■□□□□ 0.48
PHRF1-202ENST00000413872 SLC5A5Q92911 643 aa18.05■□□□□ 0.48
PHRF1-202ENST00000413872 TRPM5Q9NZQ8 1165 aa18.05■□□□□ 0.48
PHRF1-202ENST00000413872 PSMC3IPQ9P2W1 217 aaPredicted RBP18.05■□□□□ 0.48
PHRF1-202ENST00000413872 ADM5C9JUS6 153 aa18.05■□□□□ 0.48
PHRF1-202ENST00000413872 SPAG7O75391 227 aa18.05■□□□□ 0.48
PHRF1-202ENST00000413872 SETSIPP0DME0 302 aa18.05■□□□□ 0.48
PHRF1-202ENST00000413872 ERVK-9P63128 1117 aa18.05■□□□□ 0.48
PHRF1-202ENST00000413872 ERVK-24P63145 666 aa18.05■□□□□ 0.48
PHRF1-202ENST00000413872 MKL1Q969V6 931 aa18.05■□□□□ 0.48
PHRF1-202ENST00000413872 ZNF263O14978 683 aa18.04■□□□□ 0.48
PHRF1-202ENST00000413872 KPNA1P52294 538 aaPredicted RBP18.04■□□□□ 0.48
PHRF1-202ENST00000413872 ZNF200P98182 395 aaPredicted RBP18.04■□□□□ 0.48
PHRF1-202ENST00000413872 TTI2Q6NXR4 508 aa18.04■□□□□ 0.48
PHRF1-202ENST00000413872 VGLL2Q8N8G2 317 aa18.04■□□□□ 0.48
PHRF1-202ENST00000413872 TADA3O75528 432 aa18.04■□□□□ 0.48
PHRF1-202ENST00000413872 HMOX2P30519 316 aa18.04■□□□□ 0.48
PHRF1-202ENST00000413872 ZPBP2Q6X784 338 aa18.04■□□□□ 0.48
PHRF1-202ENST00000413872 KDELC2Q7Z4H8 507 aa18.04■□□□□ 0.48
PHRF1-202ENST00000413872 JAMLQ86YT9 394 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms