RNA–Protein interactions for RNA: ENST00000413636.6

CIRBP-202, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2 BASIC

Gene CIRBP, Length 1,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-202ENST00000413636 C17orf80Q9BSJ5 609 aa19.84■□□□□ 0.77
CIRBP-202ENST00000413636 LACRTQ9GZZ8 138 aa19.84■□□□□ 0.77
CIRBP-202ENST00000413636 GDAP2Q9NXN4 497 aa19.84■□□□□ 0.77
CIRBP-202ENST00000413636 RWDD3Q9Y3V2 267 aa19.84■□□□□ 0.77
CIRBP-202ENST00000413636 DYNC1I1O14576 645 aa19.83■□□□□ 0.76
CIRBP-202ENST00000413636 SLU7O95391 586 aaKnown RBP19.83■□□□□ 0.76
CIRBP-202ENST00000413636 PAX3P23760 479 aa19.83■□□□□ 0.76
CIRBP-202ENST00000413636 PPM1AP35813 382 aa19.83■□□□□ 0.76
CIRBP-202ENST00000413636 TAP1Q03518 808 aa19.83■□□□□ 0.76
CIRBP-202ENST00000413636 ARHGAP44Q17R89 818 aa19.83■□□□□ 0.76
CIRBP-202ENST00000413636 PRPF38BQ5VTL8 546 aaKnown RBP19.83■□□□□ 0.76
CIRBP-202ENST00000413636 FUT10Q6P4F1 479 aa19.83■□□□□ 0.76
CIRBP-202ENST00000413636 SCARA5Q6ZMJ2 495 aa19.83■□□□□ 0.76
CIRBP-202ENST00000413636 SLC35F6Q8N357 371 aa19.83■□□□□ 0.76
CIRBP-202ENST00000413636 PPM1KQ8N3J5 372 aa19.83■□□□□ 0.76
CIRBP-202ENST00000413636 TMEM169Q96HH4 297 aa19.83■□□□□ 0.76
CIRBP-202ENST00000413636 SUSD3Q96L08 255 aa19.83■□□□□ 0.76
CIRBP-202ENST00000413636 MMS19Q96T76 1030 aa19.83■□□□□ 0.76
CIRBP-202ENST00000413636 NAPGQ99747 312 aaPredicted RBP19.83■□□□□ 0.76
CIRBP-202ENST00000413636 GPR62Q9BZJ7 368 aa19.83■□□□□ 0.76
CIRBP-202ENST00000413636 GPR88Q9GZN0 384 aa19.83■□□□□ 0.76
CIRBP-202ENST00000413636 NIF3L1Q9GZT8 377 aa19.83■□□□□ 0.76
CIRBP-202ENST00000413636 MTUS1Q9ULD2 1270 aa19.83■□□□□ 0.76
CIRBP-202ENST00000413636 RANBP2P49792 3224 aaKnown RBP19.82■□□□□ 0.76
CIRBP-202ENST00000413636 MYH10P35580 1976 aa19.82■□□□□ 0.76
CIRBP-202ENST00000413636 A0A087X0T9 212 aa19.82■□□□□ 0.76
CIRBP-202ENST00000413636 A0A1W2PPC1 479 aa19.82■□□□□ 0.76
CIRBP-202ENST00000413636 CYB561D2O14569 222 aa19.82■□□□□ 0.76
CIRBP-202ENST00000413636 FAM228BP0C875 321 aa19.82■□□□□ 0.76
CIRBP-202ENST00000413636 ASPAP45381 313 aa19.82■□□□□ 0.76
CIRBP-202ENST00000413636 SMAD3P84022 425 aaKnown RBP19.82■□□□□ 0.76
CIRBP-202ENST00000413636 SMYD5Q6GMV2 418 aa19.82■□□□□ 0.76
CIRBP-202ENST00000413636 KLHL23Q8NBE8 558 aa19.82■□□□□ 0.76
CIRBP-202ENST00000413636 TRIM58Q8NG06 486 aa19.82■□□□□ 0.76
CIRBP-202ENST00000413636 TGS1Q96RS0 853 aaKnown RBP19.82■□□□□ 0.76
CIRBP-202ENST00000413636 RCCD1A6NED2 376 aa19.81■□□□□ 0.76
CIRBP-202ENST00000413636 BTNL10A8MVZ5 291 aa19.81■□□□□ 0.76
CIRBP-202ENST00000413636 M0QZQ0 153 aa19.81■□□□□ 0.76
CIRBP-202ENST00000413636 FOXN3O00409 490 aaPredicted RBP19.81■□□□□ 0.76
CIRBP-202ENST00000413636 CTIFO43310 598 aaKnown RBP19.81■□□□□ 0.76
CIRBP-202ENST00000413636 TRAPPC3O43617 180 aa19.81■□□□□ 0.76
CIRBP-202ENST00000413636 HUS1O60921 280 aa19.81■□□□□ 0.76
CIRBP-202ENST00000413636 TACC1O75410 805 aa19.81■□□□□ 0.76
CIRBP-202ENST00000413636 FGF18O76093 207 aa19.81■□□□□ 0.76
CIRBP-202ENST00000413636 ABL1P00519 1130 aa19.81■□□□□ 0.76
CIRBP-202ENST00000413636 P4HA1P13674 534 aa19.81■□□□□ 0.76
CIRBP-202ENST00000413636 DNAJB2P25686 324 aa19.81■□□□□ 0.76
CIRBP-202ENST00000413636 GCNT1Q02742 428 aa19.81■□□□□ 0.76
CIRBP-202ENST00000413636 PPP2R2DQ66LE6 453 aa19.81■□□□□ 0.76
CIRBP-202ENST00000413636 KAT5Q92993 513 aa19.81■□□□□ 0.76
CIRBP-202ENST00000413636 ARID3AQ99856 593 aa19.81■□□□□ 0.76
CIRBP-202ENST00000413636 SMYD3Q9H7B4 428 aa19.81■□□□□ 0.76
CIRBP-202ENST00000413636 INTUQ9ULD6 942 aa19.81■□□□□ 0.76
CIRBP-202ENST00000413636 L1RE1Q9UN81 338 aa19.81■□□□□ 0.76
CIRBP-202ENST00000413636 SF3B1O75533 1304 aaKnown RBP eCLIP19.81■□□□□ 0.761e-6■■■■■ 35.3
CIRBP-202ENST00000413636 PLXNA4Q9HCM2 1894 aa19.81■□□□□ 0.76
CIRBP-202ENST00000413636 VWA8A3KMH1 1905 aa19.81■□□□□ 0.76
CIRBP-202ENST00000413636 FANCGO15287 622 aa19.8■□□□□ 0.76
CIRBP-202ENST00000413636 RAP1GAPP47736 663 aa19.8■□□□□ 0.76
CIRBP-202ENST00000413636 ELAVL2Q12926 359 aaKnown RBP19.8■□□□□ 0.76
CIRBP-202ENST00000413636 CUL2Q13617 745 aa19.8■□□□□ 0.76
CIRBP-202ENST00000413636 SOWAHAQ2M3V2 549 aa19.8■□□□□ 0.76
CIRBP-202ENST00000413636 FAM171A1Q5VUB5 890 aa19.8■□□□□ 0.76
CIRBP-202ENST00000413636 ALKBH5Q6P6C2 394 aaKnown RBP19.8■□□□□ 0.76
CIRBP-202ENST00000413636 APPL2Q8NEU8 664 aa19.8■□□□□ 0.76
CIRBP-202ENST00000413636 ALS2CR12Q96Q35 445 aa19.8■□□□□ 0.76
CIRBP-202ENST00000413636 PLVAPQ9BX97 442 aa19.8■□□□□ 0.76
CIRBP-202ENST00000413636 VN1R3Q9BXE9 311 aa19.8■□□□□ 0.76
CIRBP-202ENST00000413636 BCO2Q9BYV7 579 aa19.8■□□□□ 0.76
CIRBP-202ENST00000413636 SDCBP2Q9H190 292 aa19.8■□□□□ 0.76
CIRBP-202ENST00000413636 SLC28A3Q9HAS3 691 aa19.8■□□□□ 0.76
CIRBP-202ENST00000413636 TRIM10Q9UDY6 481 aa19.8■□□□□ 0.76
CIRBP-202ENST00000413636 NAGPAQ9UK23 515 aa19.8■□□□□ 0.76
CIRBP-202ENST00000413636 PCDHB8Q9UN66 801 aa19.8■□□□□ 0.76
CIRBP-202ENST00000413636 TIMM13Q9Y5L4 95 aaPredicted RBP19.8■□□□□ 0.76
CIRBP-202ENST00000413636 TSC2P49815 1807 aa19.8■□□□□ 0.76
CIRBP-202ENST00000413636 EFEMP2O95967 443 aa19.8■□□□□ 0.76
CIRBP-202ENST00000413636 WEE2P0C1S8 567 aa19.8■□□□□ 0.76
CIRBP-202ENST00000413636 ODC1P11926 461 aa19.8■□□□□ 0.76
CIRBP-202ENST00000413636 TBXAS1P24557 533 aaPredicted RBP19.8■□□□□ 0.76
CIRBP-202ENST00000413636 CDH8P55286 799 aa19.8■□□□□ 0.76
CIRBP-202ENST00000413636 ERVK-21P61565 698 aa19.8■□□□□ 0.76
CIRBP-202ENST00000413636 KRT17Q04695 432 aa19.8■□□□□ 0.76
CIRBP-202ENST00000413636 WSCD1Q658N2 575 aa19.8■□□□□ 0.76
CIRBP-202ENST00000413636 TAS1R1Q7RTX1 841 aa19.8■□□□□ 0.76
CIRBP-202ENST00000413636 FAM71AQ8IYT1 594 aa19.8■□□□□ 0.76
CIRBP-202ENST00000413636 PDCL2Q8N4E4 241 aa19.8■□□□□ 0.76
CIRBP-202ENST00000413636 TOP6BLQ8N6T0 577 aa19.8■□□□□ 0.76
CIRBP-202ENST00000413636 SHC3Q92529 594 aa19.8■□□□□ 0.76
CIRBP-202ENST00000413636 FAXDC2Q96IV6 333 aa19.8■□□□□ 0.76
CIRBP-202ENST00000413636 B3GALT6Q96L58 329 aa19.8■□□□□ 0.76
CIRBP-202ENST00000413636 SAMD11Q96NU1 681 aa19.8■□□□□ 0.76
CIRBP-202ENST00000413636 CERS4Q9HA82 394 aa19.8■□□□□ 0.76
CIRBP-202ENST00000413636 C5orf67F2Z3F1 127 aa19.79■□□□□ 0.76
CIRBP-202ENST00000413636 TNFAIP3P21580 790 aa19.79■□□□□ 0.76
CIRBP-202ENST00000413636 TKTP29401 623 aaKnown RBP19.79■□□□□ 0.76
CIRBP-202ENST00000413636 PLCB3Q01970 1234 aa19.79■□□□□ 0.76
CIRBP-202ENST00000413636 LRIT3Q3SXY7 679 aa19.79■□□□□ 0.76
CIRBP-202ENST00000413636 DPH6Q7L8W6 267 aa19.79■□□□□ 0.76
CIRBP-202ENST00000413636 LIMS2Q7Z4I7 341 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms