RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 RXFP3Q9NSD7 469 aa13.17□□□□□ -0.3
LIMS2-210ENST00000413578 BLOC1S4Q9NUP1 217 aa13.17□□□□□ -0.3
LIMS2-210ENST00000413578 ZMYM5Q9UJ78 669 aa13.17□□□□□ -0.3
LIMS2-210ENST00000413578 CCL26Q9Y258 94 aa13.17□□□□□ -0.3
LIMS2-210ENST00000413578 DERAQ9Y315 318 aa13.17□□□□□ -0.3
LIMS2-210ENST00000413578 KIF26AQ9ULI4 1882 aaPredicted RBP13.16□□□□□ -0.3
LIMS2-210ENST00000413578 TSC2P49815 1807 aa13.16□□□□□ -0.3
LIMS2-210ENST00000413578 VWA3AA6NCI4 1184 aa13.16□□□□□ -0.3
LIMS2-210ENST00000413578 SLC26A4O43511 780 aa13.16□□□□□ -0.3
LIMS2-210ENST00000413578 F11P03951 625 aa13.16□□□□□ -0.3
LIMS2-210ENST00000413578 HAPLN1P10915 354 aaPredicted RBP13.16□□□□□ -0.3
LIMS2-210ENST00000413578 SHC2P98077 582 aa13.16□□□□□ -0.3
LIMS2-210ENST00000413578 SMARCB1Q12824 385 aa13.16□□□□□ -0.3
LIMS2-210ENST00000413578 SF3A2Q15428 464 aaKnown RBP13.16□□□□□ -0.3
LIMS2-210ENST00000413578 SPPL2BQ8TCT7 592 aa13.16□□□□□ -0.3
LIMS2-210ENST00000413578 C2orf15Q8WU43 125 aaKnown RBP13.16□□□□□ -0.3
LIMS2-210ENST00000413578 USP13Q92995 863 aaPredicted RBP13.16□□□□□ -0.3
LIMS2-210ENST00000413578 ARRDC1-AS1Q9H2J1 176 aa13.16□□□□□ -0.3
LIMS2-210ENST00000413578 ASB7Q9H672 318 aa13.16□□□□□ -0.3
LIMS2-210ENST00000413578 GKN1Q9NS71 199 aa13.16□□□□□ -0.3
LIMS2-210ENST00000413578 THG1LQ9NWX6 298 aaKnown RBP13.16□□□□□ -0.3
LIMS2-210ENST00000413578 DSEQ9UL01 958 aa13.16□□□□□ -0.3
LIMS2-210ENST00000413578 C2CD2Q9Y426 696 aa13.16□□□□□ -0.3
LIMS2-210ENST00000413578 STYXL1Q9Y6J8 313 aa13.16□□□□□ -0.3
LIMS2-210ENST00000413578 NUP210Q8TEM1 1887 aaPredicted RBP13.16□□□□□ -0.3
LIMS2-210ENST00000413578 SDK1Q7Z5N4 2213 aa13.15□□□□□ -0.3
LIMS2-210ENST00000413578 SOBPA7XYQ1 873 aa13.15□□□□□ -0.3
LIMS2-210ENST00000413578 K7ENM7 598 aa13.15□□□□□ -0.3
LIMS2-210ENST00000413578 AXIN1O15169 862 aa13.15□□□□□ -0.3
LIMS2-210ENST00000413578 RPP40O75818 363 aaKnown RBP13.15□□□□□ -0.3
LIMS2-210ENST00000413578 AKAP3O75969 853 aa13.15□□□□□ -0.3
LIMS2-210ENST00000413578 PXNP49023 591 aaPredicted RBP13.15□□□□□ -0.3
LIMS2-210ENST00000413578 NLRP12P59046 1061 aa13.15□□□□□ -0.3
LIMS2-210ENST00000413578 GTF2BQ00403 316 aa13.15□□□□□ -0.3
LIMS2-210ENST00000413578 RUNX3Q13761 415 aa13.15□□□□□ -0.3
LIMS2-210ENST00000413578 TMEM132DQ14C87 1099 aa13.15□□□□□ -0.3
LIMS2-210ENST00000413578 VEPH1Q14D04 833 aa13.15□□□□□ -0.3
LIMS2-210ENST00000413578 MGAT5BQ3V5L5 792 aa13.15□□□□□ -0.3
LIMS2-210ENST00000413578 WSCD1Q658N2 575 aa13.15□□□□□ -0.3
LIMS2-210ENST00000413578 TRIM68Q6AZZ1 485 aa13.15□□□□□ -0.3
LIMS2-210ENST00000413578 CACNA2D4Q7Z3S7 1137 aa13.15□□□□□ -0.3
LIMS2-210ENST00000413578 KBTBD6Q86V97 674 aa13.15□□□□□ -0.3
LIMS2-210ENST00000413578 GPBP1Q86WP2 473 aa13.15□□□□□ -0.3
LIMS2-210ENST00000413578 ZC3H10Q96K80 434 aaKnown RBP13.15□□□□□ -0.3
LIMS2-210ENST00000413578 MSTO1Q9BUK6 570 aa13.15□□□□□ -0.3
LIMS2-210ENST00000413578 PARVGQ9HBI0 331 aa13.15□□□□□ -0.3
LIMS2-210ENST00000413578 FBRSL1Q9HCM7 1045 aaKnown RBP13.15□□□□□ -0.3
LIMS2-210ENST00000413578 ANGPTL2Q9UKU9 493 aa13.15□□□□□ -0.3
LIMS2-210ENST00000413578 PCDHGA5Q9Y5G8 931 aa13.15□□□□□ -0.3
LIMS2-210ENST00000413578 TISP43B9A030 160 aa13.14□□□□□ -0.31
LIMS2-210ENST00000413578 ANKRD63C9JTQ0 380 aa13.14□□□□□ -0.31
LIMS2-210ENST00000413578 CYB561D2O14569 222 aa13.14□□□□□ -0.31
LIMS2-210ENST00000413578 TRAK2O60296 914 aa13.14□□□□□ -0.31
LIMS2-210ENST00000413578 TADA3O75528 432 aa13.14□□□□□ -0.31
LIMS2-210ENST00000413578 DDX6P26196 483 aaKnown RBP eCLIP13.14□□□□□ -0.31
LIMS2-210ENST00000413578 NMT1P30419 496 aaKnown RBP13.14□□□□□ -0.31
LIMS2-210ENST00000413578 TAF6P49848 677 aa13.14□□□□□ -0.31
LIMS2-210ENST00000413578 CDR1P51861 262 aa13.14□□□□□ -0.31
LIMS2-210ENST00000413578 POU5F1Q01860 360 aaKnown RBP13.14□□□□□ -0.31
LIMS2-210ENST00000413578 GRSF1Q12849 480 aaKnown RBP eCLIP13.14□□□□□ -0.31
LIMS2-210ENST00000413578 ZNF268Q14587 947 aaPredicted RBP13.14□□□□□ -0.31
LIMS2-210ENST00000413578 PTPAQ15257 358 aa13.14□□□□□ -0.31
LIMS2-210ENST00000413578 AASDHQ4L235 1098 aaPredicted RBP13.14□□□□□ -0.31
LIMS2-210ENST00000413578 N4BP2L1Q5TBK1 243 aaPredicted RBP13.14□□□□□ -0.31
LIMS2-210ENST00000413578 IL31Q6EBC2 164 aa13.14□□□□□ -0.31
LIMS2-210ENST00000413578 CRELD2Q6UXH1 353 aaPredicted RBP13.14□□□□□ -0.31
LIMS2-210ENST00000413578 EFCAB13Q8IY85 973 aa13.14□□□□□ -0.31
LIMS2-210ENST00000413578 CAMKK1Q8N5S9 505 aa13.14□□□□□ -0.31
LIMS2-210ENST00000413578 MYCT1Q8N699 235 aa13.14□□□□□ -0.31
LIMS2-210ENST00000413578 GIPC2Q8TF65 315 aa13.14□□□□□ -0.31
LIMS2-210ENST00000413578 FAM212AQ96EL1 285 aa13.14□□□□□ -0.31
LIMS2-210ENST00000413578 CDK5RAP3Q96JB5 506 aa13.14□□□□□ -0.31
LIMS2-210ENST00000413578 AK8Q96MA6 479 aa13.14□□□□□ -0.31
LIMS2-210ENST00000413578 GCNAQ96QF7 691 aa13.14□□□□□ -0.31
LIMS2-210ENST00000413578 PYM1Q9BRP8 204 aaKnown RBP13.14□□□□□ -0.31
LIMS2-210ENST00000413578 ST6GALNAC4Q9H4F1 302 aa13.14□□□□□ -0.31
LIMS2-210ENST00000413578 KIF9Q9HAQ2 790 aa13.14□□□□□ -0.31
LIMS2-210ENST00000413578 TMLHEQ9NVH6 421 aa13.14□□□□□ -0.31
LIMS2-210ENST00000413578 ATG13O75143 517 aa13.13□□□□□ -0.31
LIMS2-210ENST00000413578 RNF40O75150 1001 aa13.13□□□□□ -0.31
LIMS2-210ENST00000413578 FAM13AO94988 1023 aa13.13□□□□□ -0.31
LIMS2-210ENST00000413578 EGFP01133 1207 aa13.13□□□□□ -0.31
LIMS2-210ENST00000413578 ARSAP15289 507 aa13.13□□□□□ -0.31
LIMS2-210ENST00000413578 AVPR1AP37288 418 aa13.13□□□□□ -0.31
LIMS2-210ENST00000413578 GPR15P49685 360 aa13.13□□□□□ -0.31
LIMS2-210ENST00000413578 ACOT2P49753 483 aa13.13□□□□□ -0.31
LIMS2-210ENST00000413578 CCDC6Q16204 474 aa13.13□□□□□ -0.31
LIMS2-210ENST00000413578 PLK5Q496M5 336 aa13.13□□□□□ -0.31
LIMS2-210ENST00000413578 STPG1Q5TH74 334 aa13.13□□□□□ -0.31
LIMS2-210ENST00000413578 NAIF1Q69YI7 327 aaPredicted RBP13.13□□□□□ -0.31
LIMS2-210ENST00000413578 TXNDC8Q6A555 127 aa13.13□□□□□ -0.31
LIMS2-210ENST00000413578 MON1AQ86VX9 555 aa13.13□□□□□ -0.31
LIMS2-210ENST00000413578 MAB21L3Q8N8X9 362 aa13.13□□□□□ -0.31
LIMS2-210ENST00000413578 LEO1Q8WVC0 666 aaPredicted RBP13.13□□□□□ -0.31
LIMS2-210ENST00000413578 EZH1Q92800 747 aaPredicted RBP13.13□□□□□ -0.31
LIMS2-210ENST00000413578 SMOC1Q9H4F8 434 aa13.13□□□□□ -0.31
LIMS2-210ENST00000413578 EBF3Q9H4W6 596 aa13.13□□□□□ -0.31
LIMS2-210ENST00000413578 TDP1Q9NUW8 608 aa13.13□□□□□ -0.31
LIMS2-210ENST00000413578 POLR3BQ9NW08 1133 aaPredicted RBP13.13□□□□□ -0.31
LIMS2-210ENST00000413578 ABI2Q9NYB9 513 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms