RNA–Protein interactions for RNA: ENST00000413553.1

SIK3-202, Transcript of SIK family kinase 3, humanhuman

TSL 5

Gene SIK3, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-202ENST00000413553 WRAP73Q9P2S5 460 aaPredicted RBP9.4□□□□□ -0.9
SIK3-202ENST00000413553 PSMC3IPQ9P2W1 217 aaPredicted RBP9.4□□□□□ -0.9
SIK3-202ENST00000413553 WASF2Q9Y6W5 498 aa9.4□□□□□ -0.9
SIK3-202ENST00000413553 ZNF646O15015 1829 aaPredicted RBP9.4□□□□□ -0.91
SIK3-202ENST00000413553 GOLGA8SH3BPF8 625 aa9.4□□□□□ -0.91
SIK3-202ENST00000413553 GOLGA8MH3BSY2 632 aa9.4□□□□□ -0.91
SIK3-202ENST00000413553 DDX39AO00148 427 aaKnown RBP9.4□□□□□ -0.91
SIK3-202ENST00000413553 ZBED4O75132 1171 aa9.4□□□□□ -0.91
SIK3-202ENST00000413553 STAT2P52630 851 aa9.4□□□□□ -0.91
SIK3-202ENST00000413553 NOP14P78316 857 aaKnown RBP9.4□□□□□ -0.91
SIK3-202ENST00000413553 DYNC1I2Q13409 638 aaKnown RBP9.4□□□□□ -0.91
SIK3-202ENST00000413553 LRRC23Q53EV4 343 aaPredicted RBP9.4□□□□□ -0.91
SIK3-202ENST00000413553 SPDYAQ5MJ70 313 aa9.4□□□□□ -0.91
SIK3-202ENST00000413553 C1orf220Q5T0J3 134 aa9.4□□□□□ -0.91
SIK3-202ENST00000413553 RINLQ6ZS11 566 aa9.4□□□□□ -0.91
SIK3-202ENST00000413553 GLIS1Q8NBF1 620 aa9.4□□□□□ -0.91
SIK3-202ENST00000413553 DRAXINQ8NBI3 349 aaPredicted RBP9.4□□□□□ -0.91
SIK3-202ENST00000413553 GMCL1P1Q8NEA9 526 aa9.4□□□□□ -0.91
SIK3-202ENST00000413553 TRPM4Q8TD43 1214 aa9.4□□□□□ -0.91
SIK3-202ENST00000413553 CPA5Q8WXQ8 436 aa9.4□□□□□ -0.91
SIK3-202ENST00000413553 SHC3Q92529 594 aa9.4□□□□□ -0.91
SIK3-202ENST00000413553 DDX27Q96GQ7 796 aaKnown RBP9.4□□□□□ -0.91
SIK3-202ENST00000413553 PRR11Q96HE9 360 aaPredicted RBP9.4□□□□□ -0.91
SIK3-202ENST00000413553 FAM161BQ96MY7 647 aa9.4□□□□□ -0.91
SIK3-202ENST00000413553 WDR18Q9BV38 432 aa9.4□□□□□ -0.91
SIK3-202ENST00000413553 TIPINQ9BVW5 301 aa9.4□□□□□ -0.91
SIK3-202ENST00000413553 CYLDQ9NQC7 956 aa9.4□□□□□ -0.91
SIK3-202ENST00000413553 COL2A1P02458 1487 aaPredicted RBP9.39□□□□□ -0.91
SIK3-202ENST00000413553 TYROBPO43914 113 aa9.39□□□□□ -0.91
SIK3-202ENST00000413553 BANF1O75531 89 aa9.39□□□□□ -0.91
SIK3-202ENST00000413553 CFBP00751 764 aa9.39□□□□□ -0.91
SIK3-202ENST00000413553 PYGLP06737 847 aa9.39□□□□□ -0.91
SIK3-202ENST00000413553 ETS1P14921 441 aa9.39□□□□□ -0.91
SIK3-202ENST00000413553 ATF7P17544 494 aaPredicted RBP9.39□□□□□ -0.91
SIK3-202ENST00000413553 GSTT1P30711 240 aa9.39□□□□□ -0.91
SIK3-202ENST00000413553 CIITAP33076 1130 aa9.39□□□□□ -0.91
SIK3-202ENST00000413553 ARSEP51690 589 aa9.39□□□□□ -0.91
SIK3-202ENST00000413553 AP1B1Q10567 949 aa9.39□□□□□ -0.91
SIK3-202ENST00000413553 PDIA2Q13087 525 aaKnown RBP9.39□□□□□ -0.91
SIK3-202ENST00000413553 GPS1Q13098 491 aa9.39□□□□□ -0.91
SIK3-202ENST00000413553 C9orf131Q5VYM1 1079 aa9.39□□□□□ -0.91
SIK3-202ENST00000413553 DCAF15Q66K64 600 aa9.39□□□□□ -0.91
SIK3-202ENST00000413553 ILDR2Q71H61 639 aa9.39□□□□□ -0.91
SIK3-202ENST00000413553 RELL1Q8IUW5 271 aa9.39□□□□□ -0.91
SIK3-202ENST00000413553 APOBEC3FQ8IUX4 373 aaKnown RBP9.39□□□□□ -0.91
SIK3-202ENST00000413553 SEMA4DQ92854 862 aa9.39□□□□□ -0.91
SIK3-202ENST00000413553 LXNQ9BS40 222 aa9.39□□□□□ -0.91
SIK3-202ENST00000413553 ZNF341Q9BYN7 854 aa9.39□□□□□ -0.91
SIK3-202ENST00000413553 TMEM206Q9H813 350 aa9.39□□□□□ -0.91
SIK3-202ENST00000413553 PDP2Q9P2J9 529 aa9.39□□□□□ -0.91
SIK3-202ENST00000413553 C2orf71A6NGG8 1288 aa9.39□□□□□ -0.91
SIK3-202ENST00000413553 PI4K2BG5E9Z4 385 aa9.39□□□□□ -0.91
SIK3-202ENST00000413553 DNALI1O14645 258 aaPredicted RBP9.39□□□□□ -0.91
SIK3-202ENST00000413553 ATP2A1O14983 1001 aa9.39□□□□□ -0.91
SIK3-202ENST00000413553 FDX1P10109 184 aa9.39□□□□□ -0.91
SIK3-202ENST00000413553 YBX3P16989 372 aaKnown RBP eCLIP9.39□□□□□ -0.91
SIK3-202ENST00000413553 SLC1A1P43005 524 aa9.39□□□□□ -0.91
SIK3-202ENST00000413553 NEK3P51956 506 aa9.39□□□□□ -0.91
SIK3-202ENST00000413553 SLC18A1P54219 525 aa9.39□□□□□ -0.91
SIK3-202ENST00000413553 KLF1Q13351 362 aaPredicted RBP9.39□□□□□ -0.91
SIK3-202ENST00000413553 EFTUD2Q15029 972 aaKnown RBP eCLIP9.39□□□□□ -0.911e-6■■□□□ 11.7
SIK3-202ENST00000413553 CLEC16AQ2KHT3 1053 aa9.39□□□□□ -0.91
SIK3-202ENST00000413553 TDRPQ86YL5 185 aa9.39□□□□□ -0.91
SIK3-202ENST00000413553 KBTBD2Q8IY47 623 aa9.39□□□□□ -0.91
SIK3-202ENST00000413553 ZNF398Q8TD17 642 aa9.39□□□□□ -0.91
SIK3-202ENST00000413553 TCP10LQ8TDR4 215 aa9.39□□□□□ -0.91
SIK3-202ENST00000413553 BICD1Q96G01 975 aa9.39□□□□□ -0.91
SIK3-202ENST00000413553 GMCL1Q96IK5 515 aa9.39□□□□□ -0.91
SIK3-202ENST00000413553 NT5C1BQ96P26 610 aa9.39□□□□□ -0.91
SIK3-202ENST00000413553 TSSK1BQ9BXA7 367 aa9.39□□□□□ -0.91
SIK3-202ENST00000413553 TMEM120AQ9BXJ8 343 aa9.39□□□□□ -0.91
SIK3-202ENST00000413553 LARSQ9P2J5 1176 aaKnown RBP9.39□□□□□ -0.91
SIK3-202ENST00000413553 KANSL3Q9P2N6 904 aa9.39□□□□□ -0.91
SIK3-202ENST00000413553 STX18Q9P2W9 335 aaKnown RBP9.39□□□□□ -0.91
SIK3-202ENST00000413553 TMX2Q9Y320 296 aa9.39□□□□□ -0.91
SIK3-202ENST00000413553 IGLV3-22A0A075B6J6 115 aa9.38□□□□□ -0.91
SIK3-202ENST00000413553 IFNB1P01574 187 aa9.38□□□□□ -0.91
SIK3-202ENST00000413553 KRT10P13645 584 aa9.38□□□□□ -0.91
SIK3-202ENST00000413553 KLRC2P26717 231 aa9.38□□□□□ -0.91
SIK3-202ENST00000413553 PGM1P36871 562 aa9.38□□□□□ -0.91
SIK3-202ENST00000413553 PPP2R5CQ13362 524 aa9.38□□□□□ -0.91
SIK3-202ENST00000413553 LRRC6Q86X45 466 aa9.38□□□□□ -0.91
SIK3-202ENST00000413553 ARHGAP24Q8N264 748 aa9.38□□□□□ -0.91
SIK3-202ENST00000413553 GATA6Q92908 595 aa9.38□□□□□ -0.91
SIK3-202ENST00000413553 HAUS1Q96CS2 278 aa9.38□□□□□ -0.91
SIK3-202ENST00000413553 PTCD3Q96EY7 689 aaKnown RBP9.38□□□□□ -0.91
SIK3-202ENST00000413553 ACCSQ96QU6 501 aa9.38□□□□□ -0.91
SIK3-202ENST00000413553 WRNIP1Q96S55 665 aa9.38□□□□□ -0.91
SIK3-202ENST00000413553 CYTH2Q99418 400 aa9.38□□□□□ -0.91
SIK3-202ENST00000413553 TUBB6Q9BUF5 446 aa9.38□□□□□ -0.91
SIK3-202ENST00000413553 FOXP3Q9BZS1 431 aa9.38□□□□□ -0.91
SIK3-202ENST00000413553 MANSC1Q9H8J5 431 aa9.38□□□□□ -0.91
SIK3-202ENST00000413553 TAS2R1Q9NYW7 299 aa9.38□□□□□ -0.91
SIK3-202ENST00000413553 PKD2L1Q9P0L9 805 aa9.38□□□□□ -0.91
SIK3-202ENST00000413553 ZNF212Q9UDV6 495 aa9.38□□□□□ -0.91
SIK3-202ENST00000413553 FZD1Q9UP38 647 aa9.38□□□□□ -0.91
SIK3-202ENST00000413553 KAT6AQ92794 2004 aa9.38□□□□□ -0.91
SIK3-202ENST00000413553 PSMD10O75832 226 aa9.38□□□□□ -0.91
SIK3-202ENST00000413553 BAG2O95816 211 aa9.38□□□□□ -0.91
SIK3-202ENST00000413553 ADRB2P07550 413 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms