RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 CUL2Q13617 745 aa18.56■□□□□ 0.56
SDCBP-202ENST00000413219 HIF1AQ16665 826 aa18.56■□□□□ 0.56
SDCBP-202ENST00000413219 PLEKHG4Q58EX7 1191 aa18.56■□□□□ 0.56
SDCBP-202ENST00000413219 KAZNQ674X7 775 aa18.56■□□□□ 0.56
SDCBP-202ENST00000413219 AGBL1Q96MI9 1066 aa18.56■□□□□ 0.56
SDCBP-202ENST00000413219 TRIM55Q9BYV6 548 aa18.56■□□□□ 0.56
SDCBP-202ENST00000413219 DDX56Q9NY93 547 aaKnown RBP18.56■□□□□ 0.56
SDCBP-202ENST00000413219 TCEAL9Q9UHQ7 104 aa18.56■□□□□ 0.56
SDCBP-202ENST00000413219 FARP1Q9Y4F1 1045 aaPredicted RBP18.56■□□□□ 0.56
SDCBP-202ENST00000413219 SCN9AQ15858 1988 aa18.56■□□□□ 0.56
SDCBP-202ENST00000413219 hCG_1818297A0A087WSY0 165 aa18.56■□□□□ 0.56
SDCBP-202ENST00000413219 H0Y3Z8 333 aa18.56■□□□□ 0.56
SDCBP-202ENST00000413219 H0YCG3 227 aa18.56■□□□□ 0.56
SDCBP-202ENST00000413219 NFIBO00712 420 aa18.56■□□□□ 0.56
SDCBP-202ENST00000413219 TGDSO95455 350 aa18.56■□□□□ 0.56
SDCBP-202ENST00000413219 NEFHP12036 1026 aa18.56■□□□□ 0.56
SDCBP-202ENST00000413219 ANO5Q75V66 913 aa18.56■□□□□ 0.56
SDCBP-202ENST00000413219 MZB1Q8WU39 189 aa18.56■□□□□ 0.56
SDCBP-202ENST00000413219 FAM136AQ96C01 138 aa18.56■□□□□ 0.56
SDCBP-202ENST00000413219 PRMT6Q96LA8 375 aaPredicted RBP18.56■□□□□ 0.56
SDCBP-202ENST00000413219 FNBP1Q96RU3 617 aa18.56■□□□□ 0.56
SDCBP-202ENST00000413219 MMADHCQ9H3L0 296 aaPredicted RBP18.56■□□□□ 0.56
SDCBP-202ENST00000413219 ACSS3Q9H6R3 686 aa18.56■□□□□ 0.56
SDCBP-202ENST00000413219 LRCH1Q9Y2L9 728 aa18.56■□□□□ 0.56
SDCBP-202ENST00000413219 PCDHB4Q9Y5E5 795 aa18.56■□□□□ 0.56
SDCBP-202ENST00000413219 CLUHO75153 1309 aa18.55■□□□□ 0.56
SDCBP-202ENST00000413219 SIGLEC16A6NMB1 481 aa18.55■□□□□ 0.56
SDCBP-202ENST00000413219 CFHP08603 1231 aa18.55■□□□□ 0.56
SDCBP-202ENST00000413219 ADRA1DP25100 572 aa18.55■□□□□ 0.56
SDCBP-202ENST00000413219 CAP2P40123 477 aa18.55■□□□□ 0.56
SDCBP-202ENST00000413219 ARL4CP56559 192 aa18.55■□□□□ 0.56
SDCBP-202ENST00000413219 ZRSR2Q15696 482 aaKnown RBP18.55■□□□□ 0.56
SDCBP-202ENST00000413219 ATP13A4Q4VNC1 1196 aa18.55■□□□□ 0.56
SDCBP-202ENST00000413219 TFDP3Q5H9I0 405 aa18.55■□□□□ 0.56
SDCBP-202ENST00000413219 HP1BP3Q5SSJ5 553 aaPredicted RBP18.55■□□□□ 0.56
SDCBP-202ENST00000413219 PASD1Q8IV76 773 aa18.55■□□□□ 0.56
SDCBP-202ENST00000413219 CEP120Q8N960 986 aa18.55■□□□□ 0.56
SDCBP-202ENST00000413219 BANPQ8N9N5 519 aa18.55■□□□□ 0.56
SDCBP-202ENST00000413219 NSL1Q96IY1 281 aa18.55■□□□□ 0.56
SDCBP-202ENST00000413219 FRMD8P1Q9BZ68 369 aaPredicted RBP18.55■□□□□ 0.56
SDCBP-202ENST00000413219 VCXQ9H320 206 aa18.55■□□□□ 0.56
SDCBP-202ENST00000413219 MANSC1Q9H8J5 431 aa18.55■□□□□ 0.56
SDCBP-202ENST00000413219 NMRK1Q9NWW6 199 aa18.55■□□□□ 0.56
SDCBP-202ENST00000413219 TMOD2Q9NZR1 351 aa18.55■□□□□ 0.56
SDCBP-202ENST00000413219 MTO1Q9Y2Z2 717 aaKnown RBP18.55■□□□□ 0.56
SDCBP-202ENST00000413219 SNCAIPQ9Y6H5 919 aa18.55■□□□□ 0.56
SDCBP-202ENST00000413219 CCNE2O96020 404 aa18.54■□□□□ 0.56
SDCBP-202ENST00000413219 IL1BP01584 269 aa18.54■□□□□ 0.56
SDCBP-202ENST00000413219 MMP8P22894 467 aa18.54■□□□□ 0.56
SDCBP-202ENST00000413219 GLRA2P23416 452 aa18.54■□□□□ 0.56
SDCBP-202ENST00000413219 TBXAS1P24557 533 aaPredicted RBP18.54■□□□□ 0.56
SDCBP-202ENST00000413219 MXRA7P84157 204 aa18.54■□□□□ 0.56
SDCBP-202ENST00000413219 KRT72Q14CN4 511 aa18.54■□□□□ 0.56
SDCBP-202ENST00000413219 CCDC6Q16204 474 aa18.54■□□□□ 0.56
SDCBP-202ENST00000413219 WDR72Q3MJ13 1102 aa18.54■□□□□ 0.56
SDCBP-202ENST00000413219 KHDC1Q4VXA5 237 aaKnown RBP18.54■□□□□ 0.56
SDCBP-202ENST00000413219 TDRD10Q5VZ19 366 aaKnown RBP18.54■□□□□ 0.56
SDCBP-202ENST00000413219 CAPN12Q6ZSI9 719 aa18.54■□□□□ 0.56
SDCBP-202ENST00000413219 CHSY1Q86X52 802 aa18.54■□□□□ 0.56
SDCBP-202ENST00000413219 PPIL6Q8IXY8 311 aa18.54■□□□□ 0.56
SDCBP-202ENST00000413219 RFWD2Q8NHY2 731 aa18.54■□□□□ 0.56
SDCBP-202ENST00000413219 SLC35B2Q8TB61 432 aa18.54■□□□□ 0.56
SDCBP-202ENST00000413219 KLHL11Q9NVR0 708 aa18.54■□□□□ 0.56
SDCBP-202ENST00000413219 ASB3Q9Y575 518 aa18.54■□□□□ 0.56
SDCBP-202ENST00000413219 SMAPO00193 183 aa18.54■□□□□ 0.56
SDCBP-202ENST00000413219 GSC2O15499 205 aa18.54■□□□□ 0.56
SDCBP-202ENST00000413219 CALB1P05937 261 aa18.54■□□□□ 0.56
SDCBP-202ENST00000413219 NOP14P78316 857 aaKnown RBP18.54■□□□□ 0.56
SDCBP-202ENST00000413219 ZFYVE27Q5T4F4 411 aa18.54■□□□□ 0.56
SDCBP-202ENST00000413219 FAM91A1Q658Y4 838 aa18.54■□□□□ 0.56
SDCBP-202ENST00000413219 SAMD1Q6SPF0 538 aaPredicted RBP18.54■□□□□ 0.56
SDCBP-202ENST00000413219 TMEM270Q6UE05 265 aa18.54■□□□□ 0.56
SDCBP-202ENST00000413219 TCP10LQ8TDR4 215 aa18.54■□□□□ 0.56
SDCBP-202ENST00000413219 SYTL5Q8TDW5 730 aaPredicted RBP18.54■□□□□ 0.56
SDCBP-202ENST00000413219 PYROXD1Q8WU10 500 aa18.54■□□□□ 0.56
SDCBP-202ENST00000413219 BICD1Q96G01 975 aa18.54■□□□□ 0.56
SDCBP-202ENST00000413219 PAFAH2Q99487 392 aa18.54■□□□□ 0.56
SDCBP-202ENST00000413219 HEY2Q9UBP5 337 aa18.54■□□□□ 0.56
SDCBP-202ENST00000413219 NUMBLQ9Y6R0 609 aa18.54■□□□□ 0.56
SDCBP-202ENST00000413219 IVNS1ABPQ9Y6Y0 642 aa18.54■□□□□ 0.56
SDCBP-202ENST00000413219 ENO4A6NNW6 628 aa18.53■□□□□ 0.56
SDCBP-202ENST00000413219 E7ESA3 106 aa18.53■□□□□ 0.56
SDCBP-202ENST00000413219 SGK1O00141 431 aa18.53■□□□□ 0.56
SDCBP-202ENST00000413219 VNN1O95497 513 aa18.53■□□□□ 0.56
SDCBP-202ENST00000413219 PDHA1P08559 390 aa18.53■□□□□ 0.56
SDCBP-202ENST00000413219 SKIP12755 728 aa18.53■□□□□ 0.56
SDCBP-202ENST00000413219 TNNI1P19237 187 aa18.53■□□□□ 0.56
SDCBP-202ENST00000413219 TAP1Q03518 808 aa18.53■□□□□ 0.56
SDCBP-202ENST00000413219 TFDP1Q14186 410 aa18.53■□□□□ 0.56
SDCBP-202ENST00000413219 RFWD3Q6PCD5 774 aa18.53■□□□□ 0.56
SDCBP-202ENST00000413219 MCPH1Q8NEM0 835 aa18.53■□□□□ 0.56
SDCBP-202ENST00000413219 SPDYE1Q8NFV5 336 aaPredicted RBP18.53■□□□□ 0.56
SDCBP-202ENST00000413219 SKA1Q96BD8 255 aa18.53■□□□□ 0.56
SDCBP-202ENST00000413219 MRRFQ96E11 262 aaKnown RBP18.53■□□□□ 0.56
SDCBP-202ENST00000413219 TSC22D3Q99576 134 aa18.53■□□□□ 0.56
SDCBP-202ENST00000413219 SYT15Q9BQS2 421 aa18.53■□□□□ 0.56
SDCBP-202ENST00000413219 ARL8BQ9NVJ2 186 aa18.53■□□□□ 0.56
SDCBP-202ENST00000413219 ARHGAP28Q9P2N2 729 aa18.53■□□□□ 0.56
SDCBP-202ENST00000413219 DCTN4Q9UJW0 460 aa18.53■□□□□ 0.56
SDCBP-202ENST00000413219 EFR3BQ9Y2G0 817 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms