RNA–Protein interactions for RNA: ENST00000412157.2

SNRNP35-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best) BASIC

Gene SNRNP35, Length 1,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-202ENST00000412157 TFAP2BQ92481 460 aa12.34□□□□□ -0.43
SNRNP35-202ENST00000412157 LRCH3Q96II8 777 aa12.34□□□□□ -0.43
SNRNP35-202ENST00000412157 VCPIP1Q96JH7 1222 aa12.34□□□□□ -0.43
SNRNP35-202ENST00000412157 HEXIM2Q96MH2 286 aaKnown RBP12.34□□□□□ -0.43
SNRNP35-202ENST00000412157 TWNKQ96RR1 684 aa12.34□□□□□ -0.43
SNRNP35-202ENST00000412157 C11orf70Q9BRQ4 267 aa12.34□□□□□ -0.43
SNRNP35-202ENST00000412157 ELAC1Q9H777 363 aaKnown RBP12.34□□□□□ -0.43
SNRNP35-202ENST00000412157 AVENQ9NQS1 362 aaPredicted RBP12.34□□□□□ -0.43
SNRNP35-202ENST00000412157 TMEM161AQ9NX61 479 aa12.34□□□□□ -0.43
SNRNP35-202ENST00000412157 MIOSQ9NXC5 875 aa12.34□□□□□ -0.43
SNRNP35-202ENST00000412157 ADAM22Q9P0K1 906 aa12.34□□□□□ -0.43
SNRNP35-202ENST00000412157 UVRAGQ9P2Y5 699 aa12.34□□□□□ -0.43
SNRNP35-202ENST00000412157 CDC23Q9UJX2 597 aa12.34□□□□□ -0.43
SNRNP35-202ENST00000412157 LRFN2Q9ULH4 789 aa12.34□□□□□ -0.43
SNRNP35-202ENST00000412157 HYOU1Q9Y4L1 999 aa12.34□□□□□ -0.43
SNRNP35-202ENST00000412157 MRFAP1Q9Y605 127 aa12.34□□□□□ -0.43
SNRNP35-202ENST00000412157 SAR1BQ9Y6B6 198 aa12.34□□□□□ -0.43
SNRNP35-202ENST00000412157 LTBP2Q14767 1821 aa12.34□□□□□ -0.43
SNRNP35-202ENST00000412157 TTC3P53804 2025 aa12.33□□□□□ -0.43
SNRNP35-202ENST00000412157 ARHGEF37A1IGU5 675 aa12.33□□□□□ -0.44
SNRNP35-202ENST00000412157 M0QYV0 167 aa12.33□□□□□ -0.44
SNRNP35-202ENST00000412157 SOX1O00570 391 aaPredicted RBP12.33□□□□□ -0.44
SNRNP35-202ENST00000412157 CYB561D2O14569 222 aa12.33□□□□□ -0.44
SNRNP35-202ENST00000412157 SPTLC1O15269 473 aa12.33□□□□□ -0.44
SNRNP35-202ENST00000412157 ATMINO43313 823 aaPredicted RBP12.33□□□□□ -0.44
SNRNP35-202ENST00000412157 HOXA2O43364 376 aa12.33□□□□□ -0.44
SNRNP35-202ENST00000412157 MTA2O94776 668 aa12.33□□□□□ -0.44
SNRNP35-202ENST00000412157 CFHP08603 1231 aa12.33□□□□□ -0.44
SNRNP35-202ENST00000412157 CLTBP09497 229 aa12.33□□□□□ -0.44
SNRNP35-202ENST00000412157 TCP1P17987 556 aaKnown RBP12.33□□□□□ -0.44
SNRNP35-202ENST00000412157 WARSP23381 471 aaKnown RBP12.33□□□□□ -0.44
SNRNP35-202ENST00000412157 CDH5P33151 784 aaPredicted RBP12.33□□□□□ -0.44
SNRNP35-202ENST00000412157 CLCNKBP51801 687 aa12.33□□□□□ -0.44
SNRNP35-202ENST00000412157 CCL23P55773 120 aa12.33□□□□□ -0.44
SNRNP35-202ENST00000412157 LILRA4P59901 499 aa12.33□□□□□ -0.44
SNRNP35-202ENST00000412157 FAM189BP81408 668 aa12.33□□□□□ -0.44
SNRNP35-202ENST00000412157 C1QBPQ07021 282 aaKnown RBP12.33□□□□□ -0.44
SNRNP35-202ENST00000412157 CKAP4Q07065 602 aaKnown RBP12.33□□□□□ -0.44
SNRNP35-202ENST00000412157 FAAP100Q0VG06 881 aa12.33□□□□□ -0.44
SNRNP35-202ENST00000412157 WHAMMP3Q1A5X7 153 aa12.33□□□□□ -0.44
SNRNP35-202ENST00000412157 SOWAHAQ2M3V2 549 aa12.33□□□□□ -0.44
SNRNP35-202ENST00000412157 PAPD7Q5XG87 772 aaKnown RBP12.33□□□□□ -0.44
SNRNP35-202ENST00000412157 MON1BQ7L1V2 547 aa12.33□□□□□ -0.44
SNRNP35-202ENST00000412157 PEX26Q7Z412 305 aa12.33□□□□□ -0.44
SNRNP35-202ENST00000412157 DAAM2Q86T65 1068 aa12.33□□□□□ -0.44
SNRNP35-202ENST00000412157 RTN4RL1Q86UN2 441 aaPredicted RBP12.33□□□□□ -0.44
SNRNP35-202ENST00000412157 PHF13Q86YI8 300 aaPredicted RBP12.33□□□□□ -0.44
SNRNP35-202ENST00000412157 ABI1Q8IZP0 508 aa12.33□□□□□ -0.44
SNRNP35-202ENST00000412157 MYRIPQ8NFW9 859 aa12.33□□□□□ -0.44
SNRNP35-202ENST00000412157 ZNF564Q8TBZ8 553 aaPredicted RBP12.33□□□□□ -0.44
SNRNP35-202ENST00000412157 SCLYQ96I15 445 aa12.33□□□□□ -0.44
SNRNP35-202ENST00000412157 TNIP3Q96KP6 325 aa12.33□□□□□ -0.44
SNRNP35-202ENST00000412157 NUP85Q9BW27 656 aa12.33□□□□□ -0.44
SNRNP35-202ENST00000412157 LHX5Q9H2C1 402 aa12.33□□□□□ -0.44
SNRNP35-202ENST00000412157 MRPL47Q9HD33 250 aaKnown RBP12.33□□□□□ -0.44
SNRNP35-202ENST00000412157 OSGEPQ9NPF4 335 aa12.33□□□□□ -0.44
SNRNP35-202ENST00000412157 TMEM39AQ9NV64 488 aa12.33□□□□□ -0.44
SNRNP35-202ENST00000412157 KANSL3Q9P2N6 904 aa12.33□□□□□ -0.44
SNRNP35-202ENST00000412157 HESX1Q9UBX0 185 aa12.33□□□□□ -0.44
SNRNP35-202ENST00000412157 AMFRQ9UKV5 643 aa12.33□□□□□ -0.44
SNRNP35-202ENST00000412157 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.33□□□□□ -0.44
SNRNP35-202ENST00000412157 PCDHB7Q9Y5E2 793 aa12.33□□□□□ -0.44
SNRNP35-202ENST00000412157 SCINQ9Y6U3 715 aa12.33□□□□□ -0.44
SNRNP35-202ENST00000412157 RANBP2P49792 3224 aaKnown RBP12.33□□□□□ -0.44
SNRNP35-202ENST00000412157 A0A1W2PPC1 479 aa12.32□□□□□ -0.44
SNRNP35-202ENST00000412157 O00370 1275 aa12.32□□□□□ -0.44
SNRNP35-202ENST00000412157 MICAL2O94851 1124 aa12.32□□□□□ -0.44
SNRNP35-202ENST00000412157 FTCDO95954 541 aa12.32□□□□□ -0.44
SNRNP35-202ENST00000412157 ODC1P11926 461 aa12.32□□□□□ -0.44
SNRNP35-202ENST00000412157 RFC2P35250 354 aa12.32□□□□□ -0.44
SNRNP35-202ENST00000412157 GNL1P36915 607 aaPredicted RBP12.32□□□□□ -0.44
SNRNP35-202ENST00000412157 AFF1P51825 1210 aaKnown RBP12.32□□□□□ -0.44
SNRNP35-202ENST00000412157 AMPD2Q01433 879 aa12.32□□□□□ -0.44
SNRNP35-202ENST00000412157 CNGA2Q16280 664 aa12.32□□□□□ -0.44
SNRNP35-202ENST00000412157 GOLGA7BQ2TAP0 167 aa12.32□□□□□ -0.44
SNRNP35-202ENST00000412157 NOMO2Q5JPE7 1267 aa12.32□□□□□ -0.44
SNRNP35-202ENST00000412157 C11orf63Q6NUN7 778 aa12.32□□□□□ -0.44
SNRNP35-202ENST00000412157 DENND1BQ6P3S1 775 aa12.32□□□□□ -0.44
SNRNP35-202ENST00000412157 MMS22LQ6ZRQ5 1243 aa12.32□□□□□ -0.44
SNRNP35-202ENST00000412157 NECAB2Q7Z6G3 386 aa12.32□□□□□ -0.44
SNRNP35-202ENST00000412157 ACOT1Q86TX2 421 aa12.32□□□□□ -0.44
SNRNP35-202ENST00000412157 ERICH1Q86X53 443 aa12.32□□□□□ -0.44
SNRNP35-202ENST00000412157 C7orf61Q8IZ16 206 aa12.32□□□□□ -0.44
SNRNP35-202ENST00000412157 TMEM86AQ8N2M4 240 aa12.32□□□□□ -0.44
SNRNP35-202ENST00000412157 CEP112Q8N8E3 955 aa12.32□□□□□ -0.44
SNRNP35-202ENST00000412157 IPO4Q8TEX9 1081 aaKnown RBP12.32□□□□□ -0.44
SNRNP35-202ENST00000412157 KBTBD7Q8WVZ9 684 aa12.32□□□□□ -0.44
SNRNP35-202ENST00000412157 PAWRQ96IZ0 340 aaKnown RBP12.32□□□□□ -0.44
SNRNP35-202ENST00000412157 SENP8Q96LD8 212 aa12.32□□□□□ -0.44
SNRNP35-202ENST00000412157 FAM193BQ96PV7 902 aaPredicted RBP12.32□□□□□ -0.44
SNRNP35-202ENST00000412157 ZSWIM1Q9BR11 485 aa12.32□□□□□ -0.44
SNRNP35-202ENST00000412157 PRO3102Q9H379 93 aa12.32□□□□□ -0.44
SNRNP35-202ENST00000412157 TBX21Q9UL17 535 aa12.32□□□□□ -0.44
SNRNP35-202ENST00000412157 STRIP2Q9ULQ0 834 aa12.32□□□□□ -0.44
SNRNP35-202ENST00000412157 SNX12Q9UMY4 172 aa12.32□□□□□ -0.44
SNRNP35-202ENST00000412157 L1RE1Q9UN81 338 aa12.32□□□□□ -0.44
SNRNP35-202ENST00000412157 UQCRHLA0A096LP55 91 aa12.31□□□□□ -0.44
SNRNP35-202ENST00000412157 TMEM110-MUSTN1A8MSY1 372 aa12.31□□□□□ -0.44
SNRNP35-202ENST00000412157 ENPP3O14638 875 aa12.31□□□□□ -0.44
SNRNP35-202ENST00000412157 BUB1BO60566 1050 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms