RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 ATG13O75143 517 aa18.06■□□□□ 0.48
MRPL55-220ENST00000411464 TBCAO75347 108 aaKnown RBP18.06■□□□□ 0.48
MRPL55-220ENST00000411464 KCNA4P22459 653 aa18.06■□□□□ 0.48
MRPL55-220ENST00000411464 AVPR1AP37288 418 aa18.06■□□□□ 0.48
MRPL55-220ENST00000411464 ACOT2P49753 483 aa18.06■□□□□ 0.48
MRPL55-220ENST00000411464 GRSF1Q12849 480 aaKnown RBP eCLIP18.06■□□□□ 0.48
MRPL55-220ENST00000411464 ADALQ6DHV7 355 aa18.06■□□□□ 0.48
MRPL55-220ENST00000411464 IL31Q6EBC2 164 aa18.06■□□□□ 0.48
MRPL55-220ENST00000411464 SLFN12LQ6IEE8 588 aa18.06■□□□□ 0.48
MRPL55-220ENST00000411464 RASSF8Q8NHQ8 419 aa18.06■□□□□ 0.48
MRPL55-220ENST00000411464 SPPL2BQ8TCT7 592 aa18.06■□□□□ 0.48
MRPL55-220ENST00000411464 CHAMP1Q96JM3 812 aa18.06■□□□□ 0.48
MRPL55-220ENST00000411464 DPP3Q9NY33 737 aa18.06■□□□□ 0.48
MRPL55-220ENST00000411464 SLC8A2Q9UPR5 921 aa18.06■□□□□ 0.48
MRPL55-220ENST00000411464 C2CD2Q9Y426 696 aa18.06■□□□□ 0.48
MRPL55-220ENST00000411464 EXTL3O43909 919 aa18.05■□□□□ 0.48
MRPL55-220ENST00000411464 HAPLN1P10915 354 aaPredicted RBP18.05■□□□□ 0.48
MRPL55-220ENST00000411464 TAF6P49848 677 aa18.05■□□□□ 0.48
MRPL55-220ENST00000411464 GTF2BQ00403 316 aa18.05■□□□□ 0.48
MRPL55-220ENST00000411464 AMPD2Q01433 879 aa18.05■□□□□ 0.48
MRPL55-220ENST00000411464 BFSP1Q12934 665 aa18.05■□□□□ 0.48
MRPL55-220ENST00000411464 RUNX3Q13761 415 aa18.05■□□□□ 0.48
MRPL55-220ENST00000411464 AASDHQ4L235 1098 aaPredicted RBP18.05■□□□□ 0.48
MRPL55-220ENST00000411464 SLC39A4Q6P5W5 647 aa18.05■□□□□ 0.48
MRPL55-220ENST00000411464 DCP1BQ8IZD4 617 aaKnown RBP18.05■□□□□ 0.48
MRPL55-220ENST00000411464 C12orf50Q8NA57 414 aaPredicted RBP18.05■□□□□ 0.48
MRPL55-220ENST00000411464 GAB3Q8WWW8 586 aa18.05■□□□□ 0.48
MRPL55-220ENST00000411464 LOXL4Q96JB6 756 aa18.05■□□□□ 0.48
MRPL55-220ENST00000411464 FAM83CQ9BQN1 747 aa18.05■□□□□ 0.48
MRPL55-220ENST00000411464 ABI2Q9NYB9 513 aaPredicted RBP18.05■□□□□ 0.48
MRPL55-220ENST00000411464 COL4A2P08572 1712 aa18.05■□□□□ 0.48
MRPL55-220ENST00000411464 TICRRQ7Z2Z1 1910 aa18.05■□□□□ 0.48
MRPL55-220ENST00000411464 TPRP12270 2363 aaKnown RBP18.05■□□□□ 0.48
MRPL55-220ENST00000411464 CITO14578 2027 aa18.05■□□□□ 0.48
MRPL55-220ENST00000411464 ANKRD63C9JTQ0 380 aa18.04■□□□□ 0.48
MRPL55-220ENST00000411464 RPP40O75818 363 aaKnown RBP18.04■□□□□ 0.48
MRPL55-220ENST00000411464 NMT1P30419 496 aaKnown RBP18.04■□□□□ 0.48
MRPL55-220ENST00000411464 HOXC13P31276 330 aa18.04■□□□□ 0.48
MRPL55-220ENST00000411464 PXNP49023 591 aaPredicted RBP18.04■□□□□ 0.48
MRPL55-220ENST00000411464 MCM6Q14566 821 aa18.04■□□□□ 0.48
MRPL55-220ENST00000411464 ST3GAL2Q16842 350 aa18.04■□□□□ 0.48
MRPL55-220ENST00000411464 ERICH6BQ5W0A0 696 aa18.04■□□□□ 0.48
MRPL55-220ENST00000411464 WSCD1Q658N2 575 aa18.04■□□□□ 0.48
MRPL55-220ENST00000411464 CC2D1AQ6P1N0 951 aaPredicted RBP18.04■□□□□ 0.48
MRPL55-220ENST00000411464 CACNA2D4Q7Z3S7 1137 aa18.04■□□□□ 0.48
MRPL55-220ENST00000411464 LRRTM3Q86VH5 581 aa18.04■□□□□ 0.48
MRPL55-220ENST00000411464 MAB21L3Q8N8X9 362 aa18.04■□□□□ 0.48
MRPL55-220ENST00000411464 ARRDC1-AS1Q9H2J1 176 aa18.04■□□□□ 0.48
MRPL55-220ENST00000411464 EBF3Q9H4W6 596 aa18.04■□□□□ 0.48
MRPL55-220ENST00000411464 AGO2Q9UKV8 859 aaKnown RBP18.04■□□□□ 0.48
MRPL55-220ENST00000411464 PCDHB5Q9Y5E4 795 aa18.04■□□□□ 0.48
MRPL55-220ENST00000411464 ACACBO00763 2458 aa18.03■□□□□ 0.48
MRPL55-220ENST00000411464 CCDC163A0A0D9SF12 145 aa18.03■□□□□ 0.48
MRPL55-220ENST00000411464 KPNA7A9QM74 516 aa18.03■□□□□ 0.48
MRPL55-220ENST00000411464 TULP1O00294 542 aaPredicted RBP18.03■□□□□ 0.48
MRPL55-220ENST00000411464 CCDC192P0DO97 292 aa18.03■□□□□ 0.48
MRPL55-220ENST00000411464 DDX6P26196 483 aaKnown RBP eCLIP18.03■□□□□ 0.48
MRPL55-220ENST00000411464 NLRP12P59046 1061 aa18.03■□□□□ 0.48
MRPL55-220ENST00000411464 POU5F1Q01860 360 aaKnown RBP18.03■□□□□ 0.48
MRPL55-220ENST00000411464 ZC2HC1CQ53FD0 456 aaPredicted RBP18.03■□□□□ 0.48
MRPL55-220ENST00000411464 TMEM196Q5HYL7 178 aa18.03■□□□□ 0.48
MRPL55-220ENST00000411464 MRPS31Q92665 395 aaKnown RBP18.03■□□□□ 0.48
MRPL55-220ENST00000411464 RAD54LQ92698 747 aa18.03■□□□□ 0.48
MRPL55-220ENST00000411464 USP13Q92995 863 aaPredicted RBP18.03■□□□□ 0.48
MRPL55-220ENST00000411464 BLOC1S4Q9NUP1 217 aa18.03■□□□□ 0.48
MRPL55-220ENST00000411464 TDP1Q9NUW8 608 aa18.03■□□□□ 0.48
MRPL55-220ENST00000411464 TRDMT1O14717 391 aaKnown RBP18.02■□□□□ 0.48
MRPL55-220ENST00000411464 ZNF806P0C7X5 589 aa18.02■□□□□ 0.48
MRPL55-220ENST00000411464 PLCG1P19174 1290 aa18.02■□□□□ 0.48
MRPL55-220ENST00000411464 GJB2P29033 226 aa18.02■□□□□ 0.48
MRPL55-220ENST00000411464 CACNA1BQ00975 2339 aa18.02■□□□□ 0.48
MRPL55-220ENST00000411464 TSPY1Q01534 308 aa18.02■□□□□ 0.48
MRPL55-220ENST00000411464 KARSQ15046 597 aaKnown RBP18.02■□□□□ 0.48
MRPL55-220ENST00000411464 SF3A2Q15428 464 aaKnown RBP18.02■□□□□ 0.48
MRPL55-220ENST00000411464 CCDC6Q16204 474 aa18.02■□□□□ 0.48
MRPL55-220ENST00000411464 SV2CQ496J9 727 aa18.02■□□□□ 0.48
MRPL55-220ENST00000411464 TXNDC8Q6A555 127 aa18.02■□□□□ 0.48
MRPL55-220ENST00000411464 TRIM68Q6AZZ1 485 aa18.02■□□□□ 0.48
MRPL55-220ENST00000411464 FSTL4Q6MZW2 842 aa18.02■□□□□ 0.48
MRPL55-220ENST00000411464 PKN3Q6P5Z2 889 aa18.02■□□□□ 0.48
MRPL55-220ENST00000411464 KRI1Q8N9T8 703 aaKnown RBP18.02■□□□□ 0.48
MRPL55-220ENST00000411464 EXOC4Q96A65 974 aa18.02■□□□□ 0.48
MRPL55-220ENST00000411464 FIZ1Q96SL8 496 aa18.02■□□□□ 0.48
MRPL55-220ENST00000411464 CCSER1Q9C0I3 900 aa18.02■□□□□ 0.48
MRPL55-220ENST00000411464 KIF9Q9HAQ2 790 aa18.02■□□□□ 0.48
MRPL55-220ENST00000411464 HPS4Q9NQG7 708 aa18.02■□□□□ 0.48
MRPL55-220ENST00000411464 MAGED2Q9UNF1 606 aaPredicted RBP18.02■□□□□ 0.48
MRPL55-220ENST00000411464 CCL26Q9Y258 94 aa18.02■□□□□ 0.48
MRPL55-220ENST00000411464 STYXL1Q9Y6J8 313 aa18.02■□□□□ 0.48
MRPL55-220ENST00000411464 SOBPA7XYQ1 873 aa18.01■□□□□ 0.47
MRPL55-220ENST00000411464 TISP43B9A030 160 aa18.01■□□□□ 0.47
MRPL55-220ENST00000411464 PRPF40AO75400 957 aaKnown RBP18.01■□□□□ 0.47
MRPL55-220ENST00000411464 IL18RAPO95256 599 aa18.01■□□□□ 0.47
MRPL55-220ENST00000411464 BMP15O95972 392 aa18.01■□□□□ 0.47
MRPL55-220ENST00000411464 F11P03951 625 aa18.01■□□□□ 0.47
MRPL55-220ENST00000411464 CSH1P0DML2 217 aa18.01■□□□□ 0.47
MRPL55-220ENST00000411464 CSH2P0DML3 217 aa18.01■□□□□ 0.47
MRPL55-220ENST00000411464 HMGA1P17096 107 aaKnown RBP18.01■□□□□ 0.47
MRPL55-220ENST00000411464 DDIT3P35638 169 aa18.01■□□□□ 0.47
MRPL55-220ENST00000411464 LONP1P36776 959 aaKnown RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms