RNA–Protein interactions for RNA: ENST00000409598.8

SH3D19-203, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 5,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-203ENST00000409598 SPATA6Q9NWH7 488 aaPredicted RBP7.87□□□□□ -1.15
SH3D19-203ENST00000409598 IMPACTQ9P2X3 320 aa7.87□□□□□ -1.15
SH3D19-203ENST00000409598 IP6K2Q9UHH9 426 aa7.87□□□□□ -1.15
SH3D19-203ENST00000409598 GTF2IRD1Q9UHL9 959 aa7.87□□□□□ -1.15
SH3D19-203ENST00000409598 ARHGAP6O43182 974 aa7.87□□□□□ -1.15
SH3D19-203ENST00000409598 BUB1O43683 1085 aa7.87□□□□□ -1.15
SH3D19-203ENST00000409598 ATP2C2O75185 946 aa7.87□□□□□ -1.15
SH3D19-203ENST00000409598 FGFR4P22455 802 aa7.87□□□□□ -1.15
SH3D19-203ENST00000409598 VAV2P52735 878 aa7.87□□□□□ -1.15
SH3D19-203ENST00000409598 COPB1P53618 953 aaKnown RBP7.87□□□□□ -1.15
SH3D19-203ENST00000409598 FBXW4P57775 412 aa7.87□□□□□ -1.15
SH3D19-203ENST00000409598 NOP14P78316 857 aaKnown RBP7.87□□□□□ -1.15
SH3D19-203ENST00000409598 PRKAA1Q13131 559 aa7.87□□□□□ -1.15
SH3D19-203ENST00000409598 PTK2BQ14289 1009 aa7.87□□□□□ -1.15
SH3D19-203ENST00000409598 RPS6KA2Q15349 733 aa7.87□□□□□ -1.15
SH3D19-203ENST00000409598 DNAJC21Q5F1R6 531 aaKnown RBP7.87□□□□□ -1.15
SH3D19-203ENST00000409598 FRMD5Q7Z6J6 570 aa7.87□□□□□ -1.15
SH3D19-203ENST00000409598 ATOH1Q92858 354 aaPredicted RBP7.87□□□□□ -1.15
SH3D19-203ENST00000409598 ALKBH8Q96BT7 664 aaKnown RBP7.87□□□□□ -1.15
SH3D19-203ENST00000409598 SCYL1Q96KG9 808 aa7.87□□□□□ -1.15
SH3D19-203ENST00000409598 GMLQ99445 158 aa7.87□□□□□ -1.15
SH3D19-203ENST00000409598 TRMT61BQ9BVS5 477 aaKnown RBP7.87□□□□□ -1.15
SH3D19-203ENST00000409598 INTS2Q9H0H0 1204 aaKnown RBP7.87□□□□□ -1.15
SH3D19-203ENST00000409598 TMEM8AQ9HCN3 771 aa7.87□□□□□ -1.15
SH3D19-203ENST00000409598 UBIAD1Q9Y5Z9 338 aa7.87□□□□□ -1.15
SH3D19-203ENST00000409598 MRFAP1Q9Y605 127 aa7.87□□□□□ -1.15
SH3D19-203ENST00000409598 SGK1O00141 431 aa7.87□□□□□ -1.15
SH3D19-203ENST00000409598 P4HA2O15460 535 aa7.87□□□□□ -1.15
SH3D19-203ENST00000409598 MAFO75444 373 aaPredicted RBP7.87□□□□□ -1.15
SH3D19-203ENST00000409598 SETSIPP0DME0 302 aa7.87□□□□□ -1.15
SH3D19-203ENST00000409598 EN2P19622 333 aaPredicted RBP7.87□□□□□ -1.15
SH3D19-203ENST00000409598 KELP23276 732 aa7.87□□□□□ -1.15
SH3D19-203ENST00000409598 NPTX2P47972 431 aa7.87□□□□□ -1.15
SH3D19-203ENST00000409598 MDH1BQ5I0G3 518 aa7.87□□□□□ -1.15
SH3D19-203ENST00000409598 NUGGCQ68CJ6 796 aa7.87□□□□□ -1.15
SH3D19-203ENST00000409598 RHOT2Q8IXI1 618 aa7.87□□□□□ -1.15
SH3D19-203ENST00000409598 SLC5A5Q92911 643 aa7.87□□□□□ -1.15
SH3D19-203ENST00000409598 PGLYRP2Q96PD5 576 aa7.87□□□□□ -1.15
SH3D19-203ENST00000409598 SMPD4Q9NXE4 827 aa7.87□□□□□ -1.15
SH3D19-203ENST00000409598 SUN2Q9UH99 717 aa7.87□□□□□ -1.15
SH3D19-203ENST00000409598 CPP00450 1065 aa7.87□□□□□ -1.15
SH3D19-203ENST00000409598 VDRP11473 427 aa7.87□□□□□ -1.15
SH3D19-203ENST00000409598 DARSP14868 501 aaKnown RBP7.87□□□□□ -1.15
SH3D19-203ENST00000409598 GABRR2P28476 465 aa7.87□□□□□ -1.15
SH3D19-203ENST00000409598 DPP6P42658 865 aa7.87□□□□□ -1.15
SH3D19-203ENST00000409598 HNRNPH2P55795 449 aaKnown RBP7.87□□□□□ -1.15
SH3D19-203ENST00000409598 ERVK-21P61565 698 aa7.87□□□□□ -1.15
SH3D19-203ENST00000409598 IRX5P78411 483 aaPredicted RBP7.87□□□□□ -1.15
SH3D19-203ENST00000409598 UBE3AQ05086 875 aa7.87□□□□□ -1.15
SH3D19-203ENST00000409598 GRIK5Q16478 980 aa7.87□□□□□ -1.15
SH3D19-203ENST00000409598 C6orf118Q5T5N4 469 aa7.87□□□□□ -1.15
SH3D19-203ENST00000409598 CDKL3Q8IVW4 592 aaPredicted RBP7.87□□□□□ -1.15
SH3D19-203ENST00000409598 PABPC5Q96DU9 382 aaKnown RBP7.87□□□□□ -1.15
SH3D19-203ENST00000409598 SERPINB11Q96P15 392 aa7.87□□□□□ -1.15
SH3D19-203ENST00000409598 PAIP2Q9BPZ3 127 aaKnown RBP7.87□□□□□ -1.15
SH3D19-203ENST00000409598 ARHGAP9Q9BRR9 750 aa7.87□□□□□ -1.15
SH3D19-203ENST00000409598 LZTFL1Q9NQ48 299 aa7.87□□□□□ -1.15
SH3D19-203ENST00000409598 PRDM4Q9UKN5 801 aa7.87□□□□□ -1.15
SH3D19-203ENST00000409598 LRRC72A6NJI9 287 aa7.86□□□□□ -1.15
SH3D19-203ENST00000409598 SYN3O14994 580 aa7.86□□□□□ -1.15
SH3D19-203ENST00000409598 DTNBO60941 627 aa7.86□□□□□ -1.15
SH3D19-203ENST00000409598 HLA-DRAP01903 254 aa7.86□□□□□ -1.15
SH3D19-203ENST00000409598 MAPTP10636 758 aaKnown RBP7.86□□□□□ -1.15
SH3D19-203ENST00000409598 PPP3CCP48454 512 aa7.86□□□□□ -1.15
SH3D19-203ENST00000409598 DHPSP49366 369 aaPredicted RBP7.86□□□□□ -1.15
SH3D19-203ENST00000409598 MTFR1Q15390 333 aa7.86□□□□□ -1.15
SH3D19-203ENST00000409598 USP39Q53GS9 565 aaKnown RBP7.86□□□□□ -1.15
SH3D19-203ENST00000409598 PRR23CQ6ZRP0 262 aa7.86□□□□□ -1.15
SH3D19-203ENST00000409598 PRPF39Q86UA1 669 aaKnown RBP7.86□□□□□ -1.15
SH3D19-203ENST00000409598 C11orf74Q86VG3 221 aa7.86□□□□□ -1.15
SH3D19-203ENST00000409598 CATSPER3Q86XQ3 398 aa7.86□□□□□ -1.15
SH3D19-203ENST00000409598 SYT2Q8N9I0 419 aaPredicted RBP7.86□□□□□ -1.15
SH3D19-203ENST00000409598 HERVK_113Q902F9 699 aa7.86□□□□□ -1.15
SH3D19-203ENST00000409598 KAZALD1Q96I82 304 aa7.86□□□□□ -1.15
SH3D19-203ENST00000409598 SENP8Q96LD8 212 aa7.86□□□□□ -1.15
SH3D19-203ENST00000409598 MKNK1Q9BUB5 465 aa7.86□□□□□ -1.15
SH3D19-203ENST00000409598 ZCCHC2Q9C0B9 1178 aaKnown RBP7.86□□□□□ -1.15
SH3D19-203ENST00000409598 RAB17Q9H0T7 212 aa7.86□□□□□ -1.15
SH3D19-203ENST00000409598 PLEKHA4Q9H4M7 779 aa7.86□□□□□ -1.15
SH3D19-203ENST00000409598 TMEM134Q9H6X4 195 aa7.86□□□□□ -1.15
SH3D19-203ENST00000409598 TRIM45Q9H8W5 580 aaPredicted RBP7.86□□□□□ -1.15
SH3D19-203ENST00000409598 MAN1C1Q9NR34 630 aa7.86□□□□□ -1.15
SH3D19-203ENST00000409598 SIGLEC1Q9BZZ2 1709 aa7.86□□□□□ -1.15
SH3D19-203ENST00000409598 TBC1D4O60343 1298 aa7.86□□□□□ -1.15
SH3D19-203ENST00000409598 CFIP05156 583 aa7.86□□□□□ -1.15
SH3D19-203ENST00000409598 ADCY8P40145 1251 aa7.86□□□□□ -1.15
SH3D19-203ENST00000409598 GJA8P48165 433 aa7.86□□□□□ -1.15
SH3D19-203ENST00000409598 NRLP54845 237 aa7.86□□□□□ -1.15
SH3D19-203ENST00000409598 DENND5BQ6ZUT9 1274 aa7.86□□□□□ -1.15
SH3D19-203ENST00000409598 DRC3Q9H069 523 aa7.86□□□□□ -1.15
SH3D19-203ENST00000409598 DDX56Q9NY93 547 aaKnown RBP7.86□□□□□ -1.15
SH3D19-203ENST00000409598 ATRNL1Q5VV63 1379 aa7.86□□□□□ -1.15
SH3D19-203ENST00000409598 TCRBV5S4A2TA0A5A2 114 aa7.86□□□□□ -1.15
SH3D19-203ENST00000409598 CCL16O15467 120 aa7.86□□□□□ -1.15
SH3D19-203ENST00000409598 CYP2A6P11509 494 aaPredicted RBP7.86□□□□□ -1.15
SH3D19-203ENST00000409598 POLR2LP62875 67 aaKnown RBP7.86□□□□□ -1.15
SH3D19-203ENST00000409598 EXOSC10Q01780 885 aaKnown RBP7.86□□□□□ -1.15
SH3D19-203ENST00000409598 WDR45BQ5MNZ6 344 aa7.86□□□□□ -1.15
SH3D19-203ENST00000409598 KLC3Q6P597 504 aa7.86□□□□□ -1.15
SH3D19-203ENST00000409598 TMEM192Q8IY95 271 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms