RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 KLK7P49862 253 aa17.66■□□□□ 0.42
TSPAN4-208ENST00000409531 PTPN14Q15678 1187 aa17.66■□□□□ 0.42
TSPAN4-208ENST00000409531 KIAA0319Q5VV43 1072 aa17.66■□□□□ 0.42
TSPAN4-208ENST00000409531 DPY19L2P1Q6NXN4 242 aa17.66■□□□□ 0.42
TSPAN4-208ENST00000409531 CACNA2D4Q7Z3S7 1137 aa17.66■□□□□ 0.42
TSPAN4-208ENST00000409531 METTL23Q86XA0 190 aa17.66■□□□□ 0.42
TSPAN4-208ENST00000409531 HERC2P3Q9BVR0 1158 aa17.66■□□□□ 0.42
TSPAN4-208ENST00000409531 DNAI2Q9GZS0 605 aa17.66■□□□□ 0.42
TSPAN4-208ENST00000409531 GANQ9H2C0 597 aa17.66■□□□□ 0.42
TSPAN4-208ENST00000409531 CHST7Q9NS84 486 aa17.66■□□□□ 0.42
TSPAN4-208ENST00000409531 CLEC1BQ9P126 229 aa17.66■□□□□ 0.42
TSPAN4-208ENST00000409531 DNAJC12Q9UKB3 198 aa17.66■□□□□ 0.42
TSPAN4-208ENST00000409531 PCDHB8Q9UN66 801 aa17.66■□□□□ 0.42
TSPAN4-208ENST00000409531 VWA8A3KMH1 1905 aa17.65■□□□□ 0.42
TSPAN4-208ENST00000409531 TSC2P49815 1807 aa17.65■□□□□ 0.42
TSPAN4-208ENST00000409531 MUC3AQ02505 3323 aa17.65■□□□□ 0.42
TSPAN4-208ENST00000409531 GRXCR2A6NFK2 248 aa17.65■□□□□ 0.42
TSPAN4-208ENST00000409531 CLASP2O75122 1294 aaKnown RBP17.65■□□□□ 0.42
TSPAN4-208ENST00000409531 TACC1O75410 805 aa17.65■□□□□ 0.42
TSPAN4-208ENST00000409531 NOL4O94818 638 aa17.65■□□□□ 0.42
TSPAN4-208ENST00000409531 URODP06132 367 aa17.65■□□□□ 0.42
TSPAN4-208ENST00000409531 POLR2FP61218 127 aaKnown RBP17.65■□□□□ 0.42
TSPAN4-208ENST00000409531 USP41Q3LFD5 358 aa17.65■□□□□ 0.42
TSPAN4-208ENST00000409531 PTCRAQ6ISU1 281 aaPredicted RBP17.65■□□□□ 0.42
TSPAN4-208ENST00000409531 KIAA1841Q6NSI8 718 aa17.65■□□□□ 0.42
TSPAN4-208ENST00000409531 SCARA5Q6ZMJ2 495 aa17.65■□□□□ 0.42
TSPAN4-208ENST00000409531 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.65■□□□□ 0.42
TSPAN4-208ENST00000409531 RRAGAQ7L523 313 aa17.65■□□□□ 0.42
TSPAN4-208ENST00000409531 PPFIBP1Q86W92 1011 aa17.65■□□□□ 0.42
TSPAN4-208ENST00000409531 FMNL3Q8IVF7 1028 aa17.65■□□□□ 0.42
TSPAN4-208ENST00000409531 ARHGEF19Q8IW93 802 aa17.65■□□□□ 0.42
TSPAN4-208ENST00000409531 DRC7Q8IY82 874 aa17.65■□□□□ 0.42
TSPAN4-208ENST00000409531 GPR65Q8IYL9 337 aa17.65■□□□□ 0.42
TSPAN4-208ENST00000409531 ZNF397Q8NF99 534 aaPredicted RBP17.65■□□□□ 0.42
TSPAN4-208ENST00000409531 MSLNLQ96KJ4 702 aa17.65■□□□□ 0.42
TSPAN4-208ENST00000409531 SPAG5Q96R06 1193 aa17.65■□□□□ 0.42
TSPAN4-208ENST00000409531 EMILIN2Q9BXX0 1053 aa17.65■□□□□ 0.42
TSPAN4-208ENST00000409531 POLIQ9UNA4 740 aa17.65■□□□□ 0.42
TSPAN4-208ENST00000409531 FHOD1Q9Y613 1164 aa17.65■□□□□ 0.42
TSPAN4-208ENST00000409531 A0A1W2PQJ5 194 aa17.64■□□□□ 0.41
TSPAN4-208ENST00000409531 GOLGA6L6A8MZA4 724 aa17.64■□□□□ 0.41
TSPAN4-208ENST00000409531 CYP11A1P05108 521 aa17.64■□□□□ 0.41
TSPAN4-208ENST00000409531 SRGAP2BP0DMP2 458 aa17.64■□□□□ 0.41
TSPAN4-208ENST00000409531 LHX1P48742 406 aa17.64■□□□□ 0.41
TSPAN4-208ENST00000409531 GLUD2P49448 558 aa17.64■□□□□ 0.41
TSPAN4-208ENST00000409531 RBM10P98175 930 aaKnown RBP17.64■□□□□ 0.41
TSPAN4-208ENST00000409531 APBA1Q02410 837 aa17.64■□□□□ 0.41
TSPAN4-208ENST00000409531 DSG1Q02413 1049 aa17.64■□□□□ 0.41
TSPAN4-208ENST00000409531 RAPGEF1Q13905 1077 aa17.64■□□□□ 0.41
TSPAN4-208ENST00000409531 PTPN21Q16825 1174 aa17.64■□□□□ 0.41
TSPAN4-208ENST00000409531 SOWAHAQ2M3V2 549 aa17.64■□□□□ 0.41
TSPAN4-208ENST00000409531 FAM171A1Q5VUB5 890 aa17.64■□□□□ 0.41
TSPAN4-208ENST00000409531 TMC6Q7Z403 805 aa17.64■□□□□ 0.41
TSPAN4-208ENST00000409531 LIMS2Q7Z4I7 341 aa17.64■□□□□ 0.41
TSPAN4-208ENST00000409531 ADGRF2Q8IZF7 708 aa17.64■□□□□ 0.41
TSPAN4-208ENST00000409531 VN1R2Q8NFZ6 395 aa17.64■□□□□ 0.41
TSPAN4-208ENST00000409531 ELMO3Q96BJ8 720 aa17.64■□□□□ 0.41
TSPAN4-208ENST00000409531 KLHL5Q96PQ7 755 aa17.64■□□□□ 0.41
TSPAN4-208ENST00000409531 STK33Q9BYT3 514 aa17.64■□□□□ 0.41
TSPAN4-208ENST00000409531 SMYD3Q9H7B4 428 aa17.64■□□□□ 0.41
TSPAN4-208ENST00000409531 CD207Q9UJ71 328 aa17.64■□□□□ 0.41
TSPAN4-208ENST00000409531 BARX2Q9UMQ3 279 aaPredicted RBP17.64■□□□□ 0.41
TSPAN4-208ENST00000409531 L1RE1Q9UN81 338 aa17.64■□□□□ 0.41
TSPAN4-208ENST00000409531 FAM50BQ9Y247 325 aa17.64■□□□□ 0.41
TSPAN4-208ENST00000409531 HCFC2Q9Y5Z7 792 aa17.64■□□□□ 0.41
TSPAN4-208ENST00000409531 I3L4J1 428 aa17.63■□□□□ 0.41
TSPAN4-208ENST00000409531 C2CD2LO14523 706 aa17.63■□□□□ 0.41
TSPAN4-208ENST00000409531 CNPP09543 421 aaKnown RBP17.63■□□□□ 0.41
TSPAN4-208ENST00000409531 IGFBP6P24592 240 aaPredicted RBP17.63■□□□□ 0.41
TSPAN4-208ENST00000409531 KLRC2P26717 231 aa17.63■□□□□ 0.41
TSPAN4-208ENST00000409531 ARHGAP44Q17R89 818 aa17.63■□□□□ 0.41
TSPAN4-208ENST00000409531 IQCEQ6IPM2 695 aa17.63■□□□□ 0.41
TSPAN4-208ENST00000409531 PDXDC1Q6P996 788 aa17.63■□□□□ 0.41
TSPAN4-208ENST00000409531 GJB7Q6PEY0 223 aa17.63■□□□□ 0.41
TSPAN4-208ENST00000409531 PDCL2Q8N4E4 241 aa17.63■□□□□ 0.41
TSPAN4-208ENST00000409531 ADAMTS19Q8TE59 1207 aa17.63■□□□□ 0.41
TSPAN4-208ENST00000409531 CASP10Q92851 521 aa17.63■□□□□ 0.41
TSPAN4-208ENST00000409531 TTPALQ9BTX7 342 aa17.63■□□□□ 0.41
TSPAN4-208ENST00000409531 NAA15Q9BXJ9 866 aaKnown RBP17.63■□□□□ 0.41
TSPAN4-208ENST00000409531 TTYH3Q9C0H2 523 aa17.63■□□□□ 0.41
TSPAN4-208ENST00000409531 NUCKS1Q9H1E3 243 aaKnown RBP17.63■□□□□ 0.41
TSPAN4-208ENST00000409531 SNX25Q9H3E2 840 aa17.63■□□□□ 0.41
TSPAN4-208ENST00000409531 RXFP1Q9HBX9 757 aa17.63■□□□□ 0.41
TSPAN4-208ENST00000409531 NLRC4Q9NPP4 1024 aa17.63■□□□□ 0.41
TSPAN4-208ENST00000409531 MYO6Q9UM54 1294 aa17.63■□□□□ 0.41
TSPAN4-208ENST00000409531 LUC7L2Q9Y383 392 aaKnown RBP17.63■□□□□ 0.41
TSPAN4-208ENST00000409531 EPHB6O15197 1021 aa17.62■□□□□ 0.41
TSPAN4-208ENST00000409531 WEE2P0C1S8 567 aa17.62■□□□□ 0.41
TSPAN4-208ENST00000409531 HOXB8P17481 243 aaPredicted RBP17.62■□□□□ 0.41
TSPAN4-208ENST00000409531 FGFR3P22607 806 aa17.62■□□□□ 0.41
TSPAN4-208ENST00000409531 WARSP23381 471 aaKnown RBP17.62■□□□□ 0.41
TSPAN4-208ENST00000409531 YWHAHQ04917 246 aaPredicted RBP17.62■□□□□ 0.41
TSPAN4-208ENST00000409531 INCA1Q0VD86 236 aa17.62■□□□□ 0.41
TSPAN4-208ENST00000409531 DRAP1Q14919 205 aaPredicted RBP17.62■□□□□ 0.41
TSPAN4-208ENST00000409531 CLUL1Q15846 466 aa17.62■□□□□ 0.41
TSPAN4-208ENST00000409531 WSCD1Q658N2 575 aa17.62■□□□□ 0.41
TSPAN4-208ENST00000409531 OVOS1Q6IE37 1185 aa17.62■□□□□ 0.41
TSPAN4-208ENST00000409531 LLGL2Q6P1M3 1020 aa17.62■□□□□ 0.41
TSPAN4-208ENST00000409531 UNC93AQ86WB7 457 aa17.62■□□□□ 0.41
TSPAN4-208ENST00000409531 THEM5Q8N1Q8 247 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms