RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 SMC1BQ8NDV3 1235 aa6.65□□□□□ -1.34
GTF3C3-202ENST00000409364 WHAMMQ8TF30 809 aa6.65□□□□□ -1.34
GTF3C3-202ENST00000409364 IFT81Q8WYA0 676 aa6.65□□□□□ -1.34
GTF3C3-202ENST00000409364 TFAP2BQ92481 460 aa6.65□□□□□ -1.34
GTF3C3-202ENST00000409364 KRT35Q92764 455 aa6.65□□□□□ -1.34
GTF3C3-202ENST00000409364 CAVIN3Q969G5 261 aa6.65□□□□□ -1.34
GTF3C3-202ENST00000409364 TMEM176AQ96HP8 235 aa6.65□□□□□ -1.34
GTF3C3-202ENST00000409364 BTBD6Q96KE9 485 aa6.65□□□□□ -1.34
GTF3C3-202ENST00000409364 OSMRQ99650 979 aa6.65□□□□□ -1.34
GTF3C3-202ENST00000409364 C11orf70Q9BRQ4 267 aa6.65□□□□□ -1.34
GTF3C3-202ENST00000409364 KRTAP4-8Q9BYQ9 185 aa6.65□□□□□ -1.34
GTF3C3-202ENST00000409364 DNAI2Q9GZS0 605 aa6.65□□□□□ -1.34
GTF3C3-202ENST00000409364 MIS12Q9H081 205 aa6.65□□□□□ -1.34
GTF3C3-202ENST00000409364 RAB17Q9H0T7 212 aa6.65□□□□□ -1.34
GTF3C3-202ENST00000409364 CDHR5Q9HBB8 845 aa6.65□□□□□ -1.34
GTF3C3-202ENST00000409364 MED4Q9NPJ6 270 aa6.65□□□□□ -1.34
GTF3C3-202ENST00000409364 SNTG2Q9NY99 539 aa6.65□□□□□ -1.34
GTF3C3-202ENST00000409364 WDR35Q9P2L0 1181 aa6.65□□□□□ -1.34
GTF3C3-202ENST00000409364 FEZ2Q9UHY8 353 aaPredicted RBP6.65□□□□□ -1.34
GTF3C3-202ENST00000409364 POLIQ9UNA4 740 aa6.65□□□□□ -1.34
GTF3C3-202ENST00000409364 TMEM191CA6NGB0 347 aa6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 M0QZ92 97 aa6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 FSCN2O14926 492 aa6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 SEPT4O43236 478 aa6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 C6orf222P0C671 652 aaPredicted RBP6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 MYBL2P10244 700 aa6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 RARBP10826 455 aa6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 CYBAP13498 195 aa6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 ITGA4P13612 1032 aa6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 FGFR4P22455 802 aa6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 CARSP49589 748 aaKnown RBP6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 CDH8P55286 799 aa6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 PTPN11Q06124 597 aaPredicted RBP6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 INCA1Q0VD86 236 aa6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 NOGQ13253 232 aa6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 ZNF211Q13398 564 aaPredicted RBP6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 PIGHQ14442 188 aaPredicted RBP6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 ZNF268Q14587 947 aaPredicted RBP6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 LRRC38Q5VT99 294 aa6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 DCUN1D2Q6PH85 259 aa6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 SCARA5Q6ZMJ2 495 aa6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 SND1Q7KZF4 910 aaKnown RBP eCLIP6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 SLC13A5Q86YT5 568 aaPredicted RBP6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 WDTC1Q8N5D0 677 aa6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 LRRC52Q8N7C0 313 aa6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 SLC4A11Q8NBS3 891 aa6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 SEC14L1Q92503 715 aa6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 MAGOHBQ96A72 148 aaKnown RBP6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 C18orf8Q96DM3 657 aa6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 HEXIM2Q96MH2 286 aaKnown RBP6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 HINFPQ9BQA5 517 aa6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 NT5C1AQ9BXI3 368 aa6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 CELF4Q9BZC1 486 aaKnown RBP6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 DDX47Q9H0S4 455 aaKnown RBP6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 FAM114A2Q9NRY5 505 aa6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 HOMER3Q9NSC5 361 aa6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 AMACRQ9UHK6 382 aa6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 RASAL2Q9UJF2 1139 aa6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 NFU1Q9UMS0 254 aa6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 UBQLN1Q9UMX0 589 aaKnown RBP6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 MCM3APO60318 1980 aa6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 SIGLEC16A6NMB1 481 aa6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 PSTPIP1O43586 416 aa6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 PHF2O75151 1096 aa6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 FAM163BP0C2L3 166 aa6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 KCNE1P15382 129 aa6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 CYP3A5P20815 502 aa6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 HOXD10P28358 340 aa6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 CTGFP29279 349 aa6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 GBP1P32455 592 aa6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 PNPLA4P41247 253 aa6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 AARSP49588 968 aaKnown RBP eCLIP6.64□□□□□ -1.352e-7■■□□□ 13.7
GTF3C3-202ENST00000409364 FLT3LGP49771 235 aa6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 SNX16P57768 344 aa6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 MRPS25P82663 173 aaKnown RBP6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 ZNF200P98182 395 aaPredicted RBP6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 DR1Q01658 176 aa6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 GABPB1Q06547 395 aaPredicted RBP6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 HIC1Q14526 733 aa6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 CYP1B1Q16678 543 aa6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 SGO2Q562F6 1265 aa6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 XKR4Q5GH76 650 aa6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 DNAJC24Q6P3W2 148 aa6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 PHLDB2Q86SQ0 1253 aa6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 RCOR2Q8IZ40 523 aa6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 C3orf20Q8ND61 904 aa6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 C1orf131Q8NDD1 294 aaKnown RBP6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 TRPV1Q8NER1 839 aa6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 CASKIN2Q8WXE0 1202 aa6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 LENG1Q96BZ8 264 aaPredicted RBP6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 SNX27Q96L92 541 aa6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 ERP44Q9BS26 406 aa6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 EIF2AQ9BY44 585 aaKnown RBP6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 SDCBP2Q9H190 292 aa6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 UPF3AQ9H1J1 476 aaKnown RBP6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 LRRC19Q9H756 370 aa6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 GPBP1L1Q9HC44 474 aaPredicted RBP6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 CHST12Q9NRB3 414 aa6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 CNTN3Q9P232 1028 aa6.64□□□□□ -1.35
GTF3C3-202ENST00000409364 PCYOX1Q9UHG3 505 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms