RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 UQCRBP14927 111 aa11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 CREB1P16220 341 aa11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 MLH1P40692 756 aa11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 GALCP54803 685 aa11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 ACTR3P61158 418 aa11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 CDK18Q07002 472 aa11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 TMEM62Q0P6H9 643 aa11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 DUS1LQ6P1R4 473 aaKnown RBP11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 C1orf228Q6PIY5 440 aa11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 DNAJC14Q6Y2X3 702 aaPredicted RBP11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 FASTKD5Q7L8L6 764 aaKnown RBP11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 SFR1Q86XK3 245 aa11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 PDSS2Q86YH6 399 aa11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 TMPRSS6Q8IU80 811 aa11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 VPS52Q8N1B4 723 aa11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 GDAP1Q8TB36 358 aa11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 DDI1Q8WTU0 396 aa11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 KCNN1Q92952 543 aa11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 MCUR1Q96AQ8 359 aa11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 PARK7Q99497 189 aaKnown RBP11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 SYT11Q9BT88 431 aa11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 CRISPLD2Q9H0B8 497 aa11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 RBM38Q9H0Z9 239 aaKnown RBP11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 BLOC1S4Q9NUP1 217 aa11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 NDE1Q9NXR1 346 aa11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 POLIQ9UNA4 740 aa11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 AGTPBP1Q9UPW5 1226 aa11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 NAALADL1Q9UQQ1 740 aa11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 DMTF1Q9Y222 760 aa11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 MTO1Q9Y2Z2 717 aaKnown RBP11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 FADS3Q9Y5Q0 445 aa11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 PTCH2Q9Y6C5 1203 aa11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 ZMYM2Q9UBW7 1377 aa11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 PP2D1A8MPX8 630 aa11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 MATN2O00339 956 aa11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 BUD23O43709 281 aaKnown RBP11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 SORBS3O60504 671 aa11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 HAUS5O94927 633 aa11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 SPATA31D3P0C874 917 aa11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 ZCCHC18P0CG32 403 aa11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 HOXD12P35452 270 aa11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 SF3A3Q12874 501 aaKnown RBP eCLIP11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 CDC16Q13042 620 aa11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 MFSD10Q14728 455 aa11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 CCDC137Q6PK04 289 aaKnown RBP11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 IZUMO2Q6UXV1 221 aa11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 SPATA31D4Q6ZUB0 917 aa11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 KRT25Q7Z3Z0 450 aa11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 TRABD2AQ86V40 505 aa11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 SLC15A3Q8IY34 581 aa11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 PROCA1Q8NCQ7 364 aaPredicted RBP11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 SLC35G2Q8TBE7 412 aa11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 PLEKHO2Q8TD55 490 aa11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 TRPC4APQ8TEL6 797 aa11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 SCFD1Q8WVM8 642 aa11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 EEF2KMTQ96G04 330 aa11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 CGREF1Q99674 301 aa11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 EIF2AQ9BY44 585 aaKnown RBP11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 OSBPL8Q9BZF1 889 aa11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 WNT8AQ9H1J5 351 aa11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 TAS2R1Q9NYW7 299 aa11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 ANKFY1Q9P2R3 1169 aa11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 FETUBQ9UGM5 382 aa11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 PPP1R9AQ9ULJ8 1098 aa11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 PCDHA6Q9UN73 950 aa11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 PCDHA8Q9Y5H6 950 aa11.2□□□□□ -0.62
NIF3L1-204ENST00000409357 RANBP2P49792 3224 aaKnown RBP11.19□□□□□ -0.62
NIF3L1-204ENST00000409357 SH3PXD2BA1X283 911 aa11.19□□□□□ -0.62
NIF3L1-204ENST00000409357 HTR3EA5X5Y0 456 aa11.19□□□□□ -0.62
NIF3L1-204ENST00000409357 A6NJR5 290 aa11.19□□□□□ -0.62
NIF3L1-204ENST00000409357 TP73O15350 636 aa11.19□□□□□ -0.62
NIF3L1-204ENST00000409357 RNASEH1O60930 286 aaKnown RBP11.19□□□□□ -0.62
NIF3L1-204ENST00000409357 NEK3P51956 506 aa11.19□□□□□ -0.62
NIF3L1-204ENST00000409357 CHN2P52757 468 aa11.19□□□□□ -0.62
NIF3L1-204ENST00000409357 MTTPP55157 894 aa11.19□□□□□ -0.62
NIF3L1-204ENST00000409357 BACE1P56817 501 aa11.19□□□□□ -0.62
NIF3L1-204ENST00000409357 GEMIN4P57678 1058 aaKnown RBP11.19□□□□□ -0.62
NIF3L1-204ENST00000409357 SESN3P58005 492 aa11.19□□□□□ -0.62
NIF3L1-204ENST00000409357 P3H1Q32P28 736 aa11.19□□□□□ -0.62
NIF3L1-204ENST00000409357 CERKLQ49MI3 558 aaPredicted RBP11.19□□□□□ -0.62
NIF3L1-204ENST00000409357 SH3D19Q5HYK7 790 aa11.19□□□□□ -0.62
NIF3L1-204ENST00000409357 TMEM63BQ5T3F8 832 aa11.19□□□□□ -0.62
NIF3L1-204ENST00000409357 ZNF449Q6P9G9 518 aa11.19□□□□□ -0.62
NIF3L1-204ENST00000409357 CHRDL2Q6WN34 429 aa11.19□□□□□ -0.62
NIF3L1-204ENST00000409357 CLEC10AQ8IUN9 316 aa11.19□□□□□ -0.62
NIF3L1-204ENST00000409357 LARP4BQ92615 738 aaKnown RBP11.19□□□□□ -0.62
NIF3L1-204ENST00000409357 VTI1AQ96AJ9 217 aa11.19□□□□□ -0.62
NIF3L1-204ENST00000409357 BIRC8Q96P09 236 aa11.19□□□□□ -0.62
NIF3L1-204ENST00000409357 WDR18Q9BV38 432 aa11.19□□□□□ -0.62
NIF3L1-204ENST00000409357 C1orf21Q9H246 121 aa11.19□□□□□ -0.62
NIF3L1-204ENST00000409357 USP29Q9HBJ7 922 aa11.19□□□□□ -0.62
NIF3L1-204ENST00000409357 ROBO3Q96MS0 1386 aa11.19□□□□□ -0.62
NIF3L1-204ENST00000409357 RBBP6Q7Z6E9 1792 aaKnown RBP11.19□□□□□ -0.62
NIF3L1-204ENST00000409357 ANKRD62A6NC57 917 aa11.18□□□□□ -0.62
NIF3L1-204ENST00000409357 DENRO43583 198 aaKnown RBP11.18□□□□□ -0.62
NIF3L1-204ENST00000409357 EIF2S1P05198 315 aaKnown RBP11.18□□□□□ -0.62
NIF3L1-204ENST00000409357 TBL3Q12788 808 aaKnown RBP11.18□□□□□ -0.62
NIF3L1-204ENST00000409357 KCNH2Q12809 1159 aa11.18□□□□□ -0.62
NIF3L1-204ENST00000409357 GRB10Q13322 594 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms