RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 ADKP55263 362 aaKnown RBP15.05■□□□□ -0
CHRNA1-204ENST00000409323 DSG1Q02413 1049 aa15.05■□□□□ -0
CHRNA1-204ENST00000409323 E4F1Q66K89 784 aaPredicted RBP15.05■□□□□ -0
CHRNA1-204ENST00000409323 C12orf29Q8N999 325 aa15.05■□□□□ -0
CHRNA1-204ENST00000409323 RBBP8NLQ8NC74 664 aaPredicted RBP15.05■□□□□ -0
CHRNA1-204ENST00000409323 BAP1Q92560 729 aa15.05■□□□□ -0
CHRNA1-204ENST00000409323 SAMD11Q96NU1 681 aa15.05■□□□□ -0
CHRNA1-204ENST00000409323 PGLYRP2Q96PD5 576 aa15.05■□□□□ -0
CHRNA1-204ENST00000409323 CYP3A43Q9HB55 503 aa15.05■□□□□ -0
CHRNA1-204ENST00000409323 FAM49BQ9NUQ9 324 aa15.05■□□□□ -0
CHRNA1-204ENST00000409323 FBXL5Q9UKA1 691 aa15.05■□□□□ -0
CHRNA1-204ENST00000409323 BARX2Q9UMQ3 279 aaPredicted RBP15.05■□□□□ -0
CHRNA1-204ENST00000409323 STXBP5LQ9Y2K9 1186 aa15.05■□□□□ -0
CHRNA1-204ENST00000409323 CDY1Q9Y6F8 540 aa15.05■□□□□ -0
CHRNA1-204ENST00000409323 ITIH6Q6UXX5 1313 aa15.04■□□□□ -0
CHRNA1-204ENST00000409323 GABRDO14764 452 aa15.04■□□□□ -0
CHRNA1-204ENST00000409323 CTSAP10619 480 aa15.04■□□□□ -0
CHRNA1-204ENST00000409323 RAD23BP54727 409 aa15.04■□□□□ -0
CHRNA1-204ENST00000409323 JAM2P57087 298 aa15.04■□□□□ -0
CHRNA1-204ENST00000409323 GRIN2CQ14957 1233 aa15.04■□□□□ -0
CHRNA1-204ENST00000409323 PTPN14Q15678 1187 aa15.04■□□□□ -0
CHRNA1-204ENST00000409323 ZNF280DQ6N043 979 aa15.04■□□□□ -0
CHRNA1-204ENST00000409323 LRRTM3Q86VH5 581 aa15.04■□□□□ -0
CHRNA1-204ENST00000409323 TMEM86AQ8N2M4 240 aa15.04■□□□□ -0
CHRNA1-204ENST00000409323 SHC3Q92529 594 aa15.04■□□□□ -0
CHRNA1-204ENST00000409323 SYT15Q9BQS2 421 aa15.04■□□□□ -0
CHRNA1-204ENST00000409323 STK33Q9BYT3 514 aa15.04■□□□□ -0
CHRNA1-204ENST00000409323 RHOBTB2Q9BYZ6 727 aa15.04■□□□□ -0
CHRNA1-204ENST00000409323 MRPL17Q9NRX2 175 aaKnown RBP15.04■□□□□ -0
CHRNA1-204ENST00000409323 TMLHEQ9NVH6 421 aa15.04■□□□□ -0
CHRNA1-204ENST00000409323 DSEQ9UL01 958 aa15.04■□□□□ -0
CHRNA1-204ENST00000409323 MYBPHLA2RUH7 354 aa15.03■□□□□ -0
CHRNA1-204ENST00000409323 PER2O15055 1255 aa15.03■□□□□ -0
CHRNA1-204ENST00000409323 LPXNO60711 386 aa15.03■□□□□ -0
CHRNA1-204ENST00000409323 OAZ2O95190 189 aa15.03■□□□□ -0
CHRNA1-204ENST00000409323 CCDC130P13994 396 aa15.03■□□□□ -0
CHRNA1-204ENST00000409323 CD19P15391 556 aa15.03■□□□□ -0
CHRNA1-204ENST00000409323 BRD2P25440 801 aaKnown RBP15.03■□□□□ -0
CHRNA1-204ENST00000409323 OR1D2P34982 312 aa15.03■□□□□ -0
CHRNA1-204ENST00000409323 INCA1Q0VD86 236 aa15.03■□□□□ -0
CHRNA1-204ENST00000409323 MRPL58Q14197 206 aaKnown RBP15.03■□□□□ -0
CHRNA1-204ENST00000409323 ARID5BQ14865 1188 aa15.03■□□□□ -0
CHRNA1-204ENST00000409323 MDH1BQ5I0G3 518 aa15.03■□□□□ -0
CHRNA1-204ENST00000409323 ANKS3Q6ZW76 656 aa15.03■□□□□ -0
CHRNA1-204ENST00000409323 Q7L0L9 218 aa15.03■□□□□ -0
CHRNA1-204ENST00000409323 ADGRD2Q7Z7M1 963 aa15.03■□□□□ -0
CHRNA1-204ENST00000409323 RBM23Q86U06 439 aaKnown RBP15.03■□□□□ -0
CHRNA1-204ENST00000409323 PPFIBP1Q86W92 1011 aa15.03■□□□□ -0
CHRNA1-204ENST00000409323 THEM5Q8N1Q8 247 aa15.03■□□□□ -0
CHRNA1-204ENST00000409323 SLC4A11Q8NBS3 891 aa15.03■□□□□ -0
CHRNA1-204ENST00000409323 PIK3R5Q8WYR1 880 aa15.03■□□□□ -0
CHRNA1-204ENST00000409323 HEXIM2Q96MH2 286 aaKnown RBP15.03■□□□□ -0
CHRNA1-204ENST00000409323 CLSTN3Q9BQT9 956 aa15.03■□□□□ -0
CHRNA1-204ENST00000409323 CRTAC1Q9NQ79 661 aa15.03■□□□□ -0
CHRNA1-204ENST00000409323 GTF3C4Q9UKN8 822 aa15.03■□□□□ -0
CHRNA1-204ENST00000409323 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.03■□□□□ -0
CHRNA1-204ENST00000409323 MYH10P35580 1976 aa15.03■□□□□ -0
CHRNA1-204ENST00000409323 CLDN5O00501 218 aa15.02■□□□□ -0
CHRNA1-204ENST00000409323 CNPP09543 421 aaKnown RBP15.02■□□□□ -0
CHRNA1-204ENST00000409323 SPATA31D3P0C874 917 aa15.02■□□□□ -0
CHRNA1-204ENST00000409323 CPB1P15086 417 aa15.02■□□□□ -0
CHRNA1-204ENST00000409323 CLCN1P35523 988 aa15.02■□□□□ -0
CHRNA1-204ENST00000409323 SOX5P35711 763 aa15.02■□□□□ -0
CHRNA1-204ENST00000409323 LHX1P48742 406 aa15.02■□□□□ -0
CHRNA1-204ENST00000409323 SLC39A12Q504Y0 691 aa15.02■□□□□ -0
CHRNA1-204ENST00000409323 PDXDC1Q6P996 788 aa15.02■□□□□ -0
CHRNA1-204ENST00000409323 SPATA31D4Q6ZUB0 917 aa15.02■□□□□ -0
CHRNA1-204ENST00000409323 ENOSF1Q7L5Y1 443 aa15.02■□□□□ -0
CHRNA1-204ENST00000409323 SLC47A2Q86VL8 602 aa15.02■□□□□ -0
CHRNA1-204ENST00000409323 PALB2Q86YC2 1186 aa15.02■□□□□ -0
CHRNA1-204ENST00000409323 TFAP2BQ92481 460 aa15.02■□□□□ -0
CHRNA1-204ENST00000409323 TMEM176AQ96HP8 235 aa15.02■□□□□ -0
CHRNA1-204ENST00000409323 NUP58Q9BVL2 599 aa15.02■□□□□ -0
CHRNA1-204ENST00000409323 NT5C1AQ9BXI3 368 aa15.02■□□□□ -0
CHRNA1-204ENST00000409323 MTRRQ9UBK8 725 aa15.02■□□□□ -0
CHRNA1-204ENST00000409323 LZTS1Q9Y250 596 aa15.02■□□□□ -0
CHRNA1-204ENST00000409323 PLXNA3P51805 1871 aa15.02■□□□□ -0
CHRNA1-204ENST00000409323 ARHGEF37A1IGU5 675 aa15.02□□□□□ -0.01
CHRNA1-204ENST00000409323 CARNS1A5YM72 827 aa15.02□□□□□ -0.01
CHRNA1-204ENST00000409323 C2orf71A6NGG8 1288 aa15.02□□□□□ -0.01
CHRNA1-204ENST00000409323 TEX28O15482 410 aa15.02□□□□□ -0.01
CHRNA1-204ENST00000409323 CFHP08603 1231 aa15.02□□□□□ -0.01
CHRNA1-204ENST00000409323 SKILP12757 684 aa15.02□□□□□ -0.01
CHRNA1-204ENST00000409323 PTPN1P18031 435 aaKnown RBP15.02□□□□□ -0.01
CHRNA1-204ENST00000409323 PAX3P23760 479 aa15.02□□□□□ -0.01
CHRNA1-204ENST00000409323 ADORA2BP29275 332 aa15.02□□□□□ -0.01
CHRNA1-204ENST00000409323 KRT9P35527 623 aa15.02□□□□□ -0.01
CHRNA1-204ENST00000409323 YWHAEP62258 255 aaKnown RBP15.02□□□□□ -0.01
CHRNA1-204ENST00000409323 CCDC173Q0VFZ6 552 aa15.02□□□□□ -0.01
CHRNA1-204ENST00000409323 TBX2Q13207 712 aaPredicted RBP15.02□□□□□ -0.01
CHRNA1-204ENST00000409323 INTS6LQ5JSJ4 861 aaKnown RBP15.02□□□□□ -0.01
CHRNA1-204ENST00000409323 TAF3Q5VWG9 929 aa15.02□□□□□ -0.01
CHRNA1-204ENST00000409323 TTC9BQ8N6N2 239 aa15.02□□□□□ -0.01
CHRNA1-204ENST00000409323 B3GALNT2Q8NCR0 500 aa15.02□□□□□ -0.01
CHRNA1-204ENST00000409323 ZSWIM1Q9BR11 485 aa15.02□□□□□ -0.01
CHRNA1-204ENST00000409323 CAPN11Q9UMQ6 739 aa15.02□□□□□ -0.01
CHRNA1-204ENST00000409323 LUC7L2Q9Y383 392 aaKnown RBP15.02□□□□□ -0.01
CHRNA1-204ENST00000409323 WDR27A2RRH5 827 aa15.01□□□□□ -0.01
CHRNA1-204ENST00000409323 H7C4K7 107 aa15.01□□□□□ -0.01
CHRNA1-204ENST00000409323 FSCN2O14926 492 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms