RNA–Protein interactions for RNA: ENST00000409088.3

LRRTM4-201, Transcript of leucine rich repeat transmembrane neuronal 4, humanhuman

TSL 1 (best) BASIC

Gene LRRTM4, Length 3,616 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4-201ENST00000409088 RUBCNQ92622 972 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 CD101Q93033 1021 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 ZIC5Q96T25 663 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 USB1Q9BQ65 265 aaKnown RBP4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 APOL6Q9BWW8 343 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 UBXN6Q9BZV1 441 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 ASB7Q9H672 318 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 SNTG2Q9NY99 539 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 FAM153AQ9UHL3 310 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 GJD2Q9UKL4 321 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 HPCAL4Q9UM19 191 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 HES2Q9Y543 173 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 PCDHB3Q9Y5E6 796 aa4.23□□□□□ -1.73
LRRTM4-201ENST00000409088 TCRBV7S2A1N4TA0A589 114 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 TLR3O15455 904 aaKnown RBP4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 DAPK3O43293 454 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 HOXA11P31270 313 aaPredicted RBP4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 CTNNA1P35221 906 aaKnown RBP4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 GJC1P36383 396 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 CPT1AP50416 773 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 INHBEP58166 350 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 YWHAEP62258 255 aaKnown RBP4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 CRHR2Q13324 411 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 MAMLD1Q13495 774 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 GLIPR1L2Q4G1C9 344 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 EMBQ6PCB8 327 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 PHF13Q86YI8 300 aaPredicted RBP4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 USP6NLQ92738 828 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 MAGOHBQ96A72 148 aaKnown RBP4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 HPDLQ96IR7 371 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 VCPIP1Q96JH7 1222 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 TRIM51Q9BSJ1 452 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 EIF2AQ9BY44 585 aaKnown RBP4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 TRIM6Q9C030 488 aaPredicted RBP4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 SDCBP2Q9H190 292 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 CXCL16Q9H2A7 254 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 DPH5Q9H2P9 285 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 ADAMTS10Q9H324 1103 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 SLITRK6Q9H5Y7 841 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 SMYD3Q9H7B4 428 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 VIPAS39Q9H9C1 493 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 MRPL47Q9HD33 250 aaKnown RBP4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 DPP3Q9NY33 737 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 ABT1Q9ULW3 272 aaKnown RBP4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 CEP83Q9Y592 693 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 SIP14410 1827 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 KAT6AQ92794 2004 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 SMIM35A0A1B0GVV1 85 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 GPR32O75388 356 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 PROSCO94903 275 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 C6orf222P0C671 652 aaPredicted RBP4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 MMP8P22894 467 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 EIF4BP23588 611 aaKnown RBP4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 CTNNA2P26232 953 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 TNFRSF8P28908 595 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 RPL7AP62424 266 aaKnown RBP4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 PTP4A2Q12974 167 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 KYAT1Q16773 422 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 GLRA4Q5JXX5 417 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 ZFYVE27Q5T4F4 411 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 CYP4A22Q5TCH4 519 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 DCUN1D2Q6PH85 259 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 ZNF598Q86UK7 904 aaKnown RBP4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 ERICH1Q86X53 443 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 SLC13A5Q86YT5 568 aaPredicted RBP4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 ZDHHC14Q8IZN3 488 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 WDTC1Q8N5D0 677 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 TSEN2Q8NCE0 465 aaKnown RBP4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 FEZF2Q8TBJ5 459 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 TWNKQ96RR1 684 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 PARVAQ9NVD7 372 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 EVA1BQ9NVM1 165 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 VPS18Q9P253 973 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 PCDHGC3Q9UN70 934 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 FAN1Q9Y2M0 1017 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 UTP11Q9Y3A2 253 aaKnown RBP4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 SCINQ9Y6U3 715 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 GOLGA6BA6NDN3 693 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 MOXD2PA6NHM9 499 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 GOLGA8SH3BPF8 625 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 O00370 1275 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 P4HA1P13674 534 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 DARSP14868 501 aaKnown RBP4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 AKAP5P24588 427 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 CTGFP29279 349 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 ATICP31939 592 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 GRM5P41594 1212 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 SLC1A1P43005 524 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 KCNJ1P48048 391 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 RAD23BP54727 409 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 RBP5P82980 135 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 CDC42EP1Q00587 391 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 DR1Q01658 176 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 POU5F1Q01860 360 aaKnown RBP4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 GABPB1Q06547 395 aaPredicted RBP4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 TERF2Q15554 542 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 CLUL1Q15846 466 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 PPP2R5EQ16537 467 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 FSCN1Q16658 493 aaKnown RBP4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 GNASQ5JWF2 1037 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms