RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 H7C4K7 107 aa10.42□□□□□ -0.74
NIF3L1-202ENST00000409020 PRRG1O14668 218 aa10.42□□□□□ -0.74
NIF3L1-202ENST00000409020 XYLBO75191 536 aa10.42□□□□□ -0.74
NIF3L1-202ENST00000409020 SOAT2O75908 522 aa10.42□□□□□ -0.74
NIF3L1-202ENST00000409020 OAZ2O95190 189 aa10.42□□□□□ -0.74
NIF3L1-202ENST00000409020 YEATS4O95619 227 aa10.42□□□□□ -0.74
NIF3L1-202ENST00000409020 CPB1P15086 417 aa10.42□□□□□ -0.74
NIF3L1-202ENST00000409020 GYS2P54840 703 aa10.42□□□□□ -0.74
NIF3L1-202ENST00000409020 RWDD2BP57060 319 aa10.42□□□□□ -0.74
NIF3L1-202ENST00000409020 YWHAHQ04917 246 aaPredicted RBP10.42□□□□□ -0.74
NIF3L1-202ENST00000409020 TWF1Q12792 350 aa10.42□□□□□ -0.74
NIF3L1-202ENST00000409020 GPS2Q13227 327 aa10.42□□□□□ -0.74
NIF3L1-202ENST00000409020 DSTYKQ6XUX3 929 aa10.42□□□□□ -0.74
NIF3L1-202ENST00000409020 ALYREFQ86V81 257 aaKnown RBP10.42□□□□□ -0.74
NIF3L1-202ENST00000409020 TCEAL8Q8IYN2 117 aa10.42□□□□□ -0.74
NIF3L1-202ENST00000409020 GRAMD1CQ8IYS0 662 aa10.42□□□□□ -0.74
NIF3L1-202ENST00000409020 APPL2Q8NEU8 664 aa10.42□□□□□ -0.74
NIF3L1-202ENST00000409020 ZNF397Q8NF99 534 aaPredicted RBP10.42□□□□□ -0.74
NIF3L1-202ENST00000409020 BEST2Q8NFU1 509 aa10.42□□□□□ -0.74
NIF3L1-202ENST00000409020 OR10T2Q8NGX3 314 aa10.42□□□□□ -0.74
NIF3L1-202ENST00000409020 HVCN1Q96D96 273 aa10.42□□□□□ -0.74
NIF3L1-202ENST00000409020 SENP8Q96LD8 212 aa10.42□□□□□ -0.74
NIF3L1-202ENST00000409020 ZNF396Q96N95 335 aaPredicted RBP10.42□□□□□ -0.74
NIF3L1-202ENST00000409020 ACCSQ96QU6 501 aa10.42□□□□□ -0.74
NIF3L1-202ENST00000409020 KXD1Q9BQD3 176 aa10.42□□□□□ -0.74
NIF3L1-202ENST00000409020 RTP3Q9BQQ7 232 aa10.42□□□□□ -0.74
NIF3L1-202ENST00000409020 CORO1BQ9BR76 489 aa10.42□□□□□ -0.74
NIF3L1-202ENST00000409020 TRIM9Q9C026 710 aa10.42□□□□□ -0.74
NIF3L1-202ENST00000409020 BLZF1Q9H2G9 400 aa10.42□□□□□ -0.74
NIF3L1-202ENST00000409020 KBTBD4Q9NVX7 518 aa10.42□□□□□ -0.74
NIF3L1-202ENST00000409020 SEL1LQ9UBV2 794 aa10.42□□□□□ -0.74
NIF3L1-202ENST00000409020 FBXL21Q9UKT6 434 aa10.42□□□□□ -0.74
NIF3L1-202ENST00000409020 PCDHA7Q9UN72 937 aa10.42□□□□□ -0.74
NIF3L1-202ENST00000409020 ZDHHC9Q9Y397 364 aa10.42□□□□□ -0.74
NIF3L1-202ENST00000409020 PTPRJQ12913 1337 aa10.42□□□□□ -0.74
NIF3L1-202ENST00000409020 H0Y858 1186 aa10.41□□□□□ -0.74
NIF3L1-202ENST00000409020 POLR2DO15514 142 aaKnown RBP10.41□□□□□ -0.74
NIF3L1-202ENST00000409020 CUTAO60888 179 aa10.41□□□□□ -0.74
NIF3L1-202ENST00000409020 MOSPD3O75425 235 aa10.41□□□□□ -0.74
NIF3L1-202ENST00000409020 LRG1P02750 347 aa10.41□□□□□ -0.74
NIF3L1-202ENST00000409020 POU2F2P09086 479 aa10.41□□□□□ -0.74
NIF3L1-202ENST00000409020 TPM1P09493 284 aa10.41□□□□□ -0.74
NIF3L1-202ENST00000409020 GJA1P17302 382 aa10.41□□□□□ -0.74
NIF3L1-202ENST00000409020 PDCD2Q16342 344 aaPredicted RBP10.41□□□□□ -0.74
NIF3L1-202ENST00000409020 KYAT1Q16773 422 aa10.41□□□□□ -0.74
NIF3L1-202ENST00000409020 PRSS36Q5K4E3 855 aa10.41□□□□□ -0.74
NIF3L1-202ENST00000409020 LMBRD2Q68DH5 695 aaPredicted RBP10.41□□□□□ -0.74
NIF3L1-202ENST00000409020 NOC3LQ8WTT2 800 aaKnown RBP10.41□□□□□ -0.74
NIF3L1-202ENST00000409020 MCRS1Q96EZ8 462 aa10.41□□□□□ -0.74
NIF3L1-202ENST00000409020 ZSWIM3Q96MP5 696 aa10.41□□□□□ -0.74
NIF3L1-202ENST00000409020 SH3GL3Q99963 347 aa10.41□□□□□ -0.74
NIF3L1-202ENST00000409020 PLA2G2FQ9BZM2 168 aa10.41□□□□□ -0.74
NIF3L1-202ENST00000409020 TNMDQ9H2S6 317 aa10.41□□□□□ -0.74
NIF3L1-202ENST00000409020 MFSD1Q9H3U5 465 aa10.41□□□□□ -0.74
NIF3L1-202ENST00000409020 DPP3Q9NY33 737 aa10.41□□□□□ -0.74
NIF3L1-202ENST00000409020 SLC27A5Q9Y2P5 690 aa10.41□□□□□ -0.74
NIF3L1-202ENST00000409020 MRPS23Q9Y3D9 190 aaKnown RBP10.41□□□□□ -0.74
NIF3L1-202ENST00000409020 C2CD2Q9Y426 696 aa10.41□□□□□ -0.74
NIF3L1-202ENST00000409020 V9GYY5 206 aaPredicted RBP10.41□□□□□ -0.74
NIF3L1-202ENST00000409020 SCN1AP35498 2009 aa10.41□□□□□ -0.74
NIF3L1-202ENST00000409020 NCANO14594 1321 aa10.41□□□□□ -0.74
NIF3L1-202ENST00000409020 HAX1O00165 279 aa10.41□□□□□ -0.74
NIF3L1-202ENST00000409020 KINO60870 393 aaKnown RBP10.41□□□□□ -0.74
NIF3L1-202ENST00000409020 SRFP11831 508 aa10.41□□□□□ -0.74
NIF3L1-202ENST00000409020 ELF1P32519 619 aa10.41□□□□□ -0.74
NIF3L1-202ENST00000409020 GPC5P78333 572 aa10.41□□□□□ -0.74
NIF3L1-202ENST00000409020 DUSP4Q13115 394 aa10.41□□□□□ -0.74
NIF3L1-202ENST00000409020 TPGS2Q68CL5 300 aa10.41□□□□□ -0.74
NIF3L1-202ENST00000409020 ASTLQ6HA08 431 aaPredicted RBP10.41□□□□□ -0.74
NIF3L1-202ENST00000409020 OVOS1Q6IE37 1185 aa10.41□□□□□ -0.74
NIF3L1-202ENST00000409020 SLFN12LQ6IEE8 588 aa10.41□□□□□ -0.74
NIF3L1-202ENST00000409020 PDCD7Q8N8D1 485 aaKnown RBP10.41□□□□□ -0.74
NIF3L1-202ENST00000409020 C1orf127Q8N9H9 656 aa10.41□□□□□ -0.74
NIF3L1-202ENST00000409020 ATAD1Q8NBU5 361 aa10.41□□□□□ -0.74
NIF3L1-202ENST00000409020 CXorf38Q8TB03 319 aa10.41□□□□□ -0.74
NIF3L1-202ENST00000409020 DNAJC25Q9H1X3 360 aa10.41□□□□□ -0.74
NIF3L1-202ENST00000409020 ASB7Q9H672 318 aa10.41□□□□□ -0.74
NIF3L1-202ENST00000409020 RBAKQ9NYW8 714 aaPredicted RBP10.41□□□□□ -0.74
NIF3L1-202ENST00000409020 AFF4Q9UHB7 1163 aaKnown RBP10.41□□□□□ -0.74
NIF3L1-202ENST00000409020 DERAQ9Y315 318 aa10.41□□□□□ -0.74
NIF3L1-202ENST00000409020 YIPF1Q9Y548 306 aa10.41□□□□□ -0.74
NIF3L1-202ENST00000409020 LAMA1P25391 3075 aa10.4□□□□□ -0.74
NIF3L1-202ENST00000409020 MTMR11A4FU01 709 aa10.4□□□□□ -0.74
NIF3L1-202ENST00000409020 LRRN2O75325 713 aa10.4□□□□□ -0.74
NIF3L1-202ENST00000409020 ITGB3P05106 788 aa10.4□□□□□ -0.74
NIF3L1-202ENST00000409020 ODC1P11926 461 aa10.4□□□□□ -0.74
NIF3L1-202ENST00000409020 FCARP24071 287 aa10.4□□□□□ -0.74
NIF3L1-202ENST00000409020 POLR2BP30876 1174 aaKnown RBP10.4□□□□□ -0.74
NIF3L1-202ENST00000409020 USP8P40818 1118 aa10.4□□□□□ -0.74
NIF3L1-202ENST00000409020 ME1P48163 572 aa10.4□□□□□ -0.74
NIF3L1-202ENST00000409020 ASIC1P78348 528 aa10.4□□□□□ -0.74
NIF3L1-202ENST00000409020 NUCB2P80303 420 aa10.4□□□□□ -0.74
NIF3L1-202ENST00000409020 TFAMQ00059 246 aaKnown RBP10.4□□□□□ -0.74
NIF3L1-202ENST00000409020 CUL4BQ13620 913 aa10.4□□□□□ -0.74
NIF3L1-202ENST00000409020 CCDC142Q17RM4 750 aa10.4□□□□□ -0.74
NIF3L1-202ENST00000409020 PPP1R15BQ5SWA1 713 aa10.4□□□□□ -0.74
NIF3L1-202ENST00000409020 RESP18Q5W5W9 173 aa10.4□□□□□ -0.74
NIF3L1-202ENST00000409020 TANGO2Q6ICL3 276 aa10.4□□□□□ -0.74
NIF3L1-202ENST00000409020 EPM2AIP1Q7L775 607 aaPredicted RBP10.4□□□□□ -0.74
NIF3L1-202ENST00000409020 USP37Q86T82 979 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms