RNA–Protein interactions for RNA: ENST00000407439.7

MRE11-204, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 2 BASIC

Gene MRE11, Length 2,684 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-204ENST00000407439 ZNF236Q9UL36 1845 aa6.78□□□□□ -1.32
MRE11-204ENST00000407439 A0A1B0GUA9 196 aa6.78□□□□□ -1.32
MRE11-204ENST00000407439 LACTBL1A8MY62 500 aa6.78□□□□□ -1.32
MRE11-204ENST00000407439 CILPO75339 1184 aa6.78□□□□□ -1.32
MRE11-204ENST00000407439 P4HA1P13674 534 aa6.78□□□□□ -1.32
MRE11-204ENST00000407439 ITIH2P19823 946 aa6.78□□□□□ -1.32
MRE11-204ENST00000407439 IVDP26440 423 aa6.78□□□□□ -1.32
MRE11-204ENST00000407439 POLR2BP30876 1174 aaKnown RBP6.78□□□□□ -1.32
MRE11-204ENST00000407439 CETN2P41208 172 aa6.78□□□□□ -1.32
MRE11-204ENST00000407439 COPS2P61201 443 aa6.78□□□□□ -1.32
MRE11-204ENST00000407439 GNGT1P63211 74 aa6.78□□□□□ -1.32
MRE11-204ENST00000407439 CAV1Q03135 178 aa6.78□□□□□ -1.32
MRE11-204ENST00000407439 NFX1Q12986 1120 aaKnown RBP6.78□□□□□ -1.32
MRE11-204ENST00000407439 WDR72Q3MJ13 1102 aa6.78□□□□□ -1.32
MRE11-204ENST00000407439 ZNF394Q53GI3 561 aa6.78□□□□□ -1.32
MRE11-204ENST00000407439 DNAJC21Q5F1R6 531 aaKnown RBP6.78□□□□□ -1.32
MRE11-204ENST00000407439 JADE1Q6IE81 842 aa6.78□□□□□ -1.32
MRE11-204ENST00000407439 DRICH1Q6PGQ1 229 aaPredicted RBP6.78□□□□□ -1.32
MRE11-204ENST00000407439 DCUN1D2Q6PH85 259 aa6.78□□□□□ -1.32
MRE11-204ENST00000407439 RHBDF2Q6PJF5 856 aa6.78□□□□□ -1.32
MRE11-204ENST00000407439 PHLDB2Q86SQ0 1253 aa6.78□□□□□ -1.32
MRE11-204ENST00000407439 ERICH1Q86X53 443 aa6.78□□□□□ -1.32
MRE11-204ENST00000407439 TTC39CQ8N584 583 aa6.78□□□□□ -1.32
MRE11-204ENST00000407439 ATL2Q8NHH9 583 aa6.78□□□□□ -1.32
MRE11-204ENST00000407439 C1orf54Q8WWF1 131 aa6.78□□□□□ -1.32
MRE11-204ENST00000407439 PGM2Q96G03 612 aa6.78□□□□□ -1.32
MRE11-204ENST00000407439 TINF2Q9BSI4 451 aa6.78□□□□□ -1.32
MRE11-204ENST00000407439 TMEM109Q9BVC6 243 aa6.78□□□□□ -1.32
MRE11-204ENST00000407439 ITGA11Q9UKX5 1188 aa6.78□□□□□ -1.32
MRE11-204ENST00000407439 TSPAN1O60635 241 aa6.77□□□□□ -1.33
MRE11-204ENST00000407439 VTNP04004 478 aa6.77□□□□□ -1.33
MRE11-204ENST00000407439 ITGB3P05106 788 aa6.77□□□□□ -1.33
MRE11-204ENST00000407439 MMP3P08254 477 aa6.77□□□□□ -1.33
MRE11-204ENST00000407439 KRT19P08727 400 aa6.77□□□□□ -1.33
MRE11-204ENST00000407439 RAD23BP54727 409 aa6.77□□□□□ -1.33
MRE11-204ENST00000407439 CDC42EP1Q00587 391 aa6.77□□□□□ -1.33
MRE11-204ENST00000407439 IFFO1Q0D2I5 559 aa6.77□□□□□ -1.33
MRE11-204ENST00000407439 INCA1Q0VD86 236 aa6.77□□□□□ -1.33
MRE11-204ENST00000407439 PCBP1Q15365 356 aaKnown RBP eCLIP6.77□□□□□ -1.33
MRE11-204ENST00000407439 GRIK4Q16099 956 aa6.77□□□□□ -1.33
MRE11-204ENST00000407439 DGKDQ16760 1214 aa6.77□□□□□ -1.33
MRE11-204ENST00000407439 KCTD19Q17RG1 926 aaPredicted RBP6.77□□□□□ -1.33
MRE11-204ENST00000407439 SLC10A6Q3KNW5 377 aa6.77□□□□□ -1.33
MRE11-204ENST00000407439 KRT71Q3SY84 523 aa6.77□□□□□ -1.33
MRE11-204ENST00000407439 PTPN20Q4JDL3 420 aa6.77□□□□□ -1.33
MRE11-204ENST00000407439 MARCH8Q5T0T0 291 aa6.77□□□□□ -1.33
MRE11-204ENST00000407439 DAB2IPQ5VWQ8 1189 aa6.77□□□□□ -1.33
MRE11-204ENST00000407439 DPP9Q86TI2 863 aa6.77□□□□□ -1.33
MRE11-204ENST00000407439 CCDC50Q8IVM0 306 aa6.77□□□□□ -1.33
MRE11-204ENST00000407439 RCOR2Q8IZ40 523 aa6.77□□□□□ -1.33
MRE11-204ENST00000407439 CCDC89Q8N998 374 aa6.77□□□□□ -1.33
MRE11-204ENST00000407439 ATG4AQ8WYN0 398 aa6.77□□□□□ -1.33
MRE11-204ENST00000407439 TLCD1Q96CP7 247 aa6.77□□□□□ -1.33
MRE11-204ENST00000407439 SNF8Q96H20 258 aa6.77□□□□□ -1.33
MRE11-204ENST00000407439 ADPGKQ9BRR6 497 aa6.77□□□□□ -1.33
MRE11-204ENST00000407439 WDR35Q9P2L0 1181 aa6.77□□□□□ -1.33
MRE11-204ENST00000407439 NXF1Q9UBU9 619 aaKnown RBP6.77□□□□□ -1.33
MRE11-204ENST00000407439 NEU2Q9Y3R4 380 aa6.77□□□□□ -1.33
MRE11-204ENST00000407439 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.77□□□□□ -1.33
MRE11-204ENST00000407439 SIGLEC16A6NMB1 481 aa6.77□□□□□ -1.33
MRE11-204ENST00000407439 HMGCRP04035 888 aa6.77□□□□□ -1.33
MRE11-204ENST00000407439 SMPD1P17405 629 aa6.77□□□□□ -1.33
MRE11-204ENST00000407439 SSTR3P32745 418 aaPredicted RBP6.77□□□□□ -1.33
MRE11-204ENST00000407439 LSP1P33241 339 aa6.77□□□□□ -1.33
MRE11-204ENST00000407439 MDH1P40925 334 aaKnown RBP6.77□□□□□ -1.33
MRE11-204ENST00000407439 PTPN11Q06124 597 aaPredicted RBP6.77□□□□□ -1.33
MRE11-204ENST00000407439 PDCLQ13371 301 aa6.77□□□□□ -1.33
MRE11-204ENST00000407439 ACVR2BQ13705 512 aa6.77□□□□□ -1.33
MRE11-204ENST00000407439 BYSLQ13895 437 aaKnown RBP6.77□□□□□ -1.33
MRE11-204ENST00000407439 TMEM132DQ14C87 1099 aa6.77□□□□□ -1.33
MRE11-204ENST00000407439 DCAF4L1Q3SXM0 396 aa6.77□□□□□ -1.33
MRE11-204ENST00000407439 SPRYD7Q5W111 196 aa6.77□□□□□ -1.33
MRE11-204ENST00000407439 MAP1SQ66K74 1059 aaPredicted RBP6.77□□□□□ -1.33
MRE11-204ENST00000407439 IQSEC1Q6DN90 963 aa6.77□□□□□ -1.33
MRE11-204ENST00000407439 TRMT10CQ7L0Y3 403 aaKnown RBP6.77□□□□□ -1.33
MRE11-204ENST00000407439 KIAA0319LQ8IZA0 1049 aa6.77□□□□□ -1.33
MRE11-204ENST00000407439 SLC4A11Q8NBS3 891 aa6.77□□□□□ -1.33
MRE11-204ENST00000407439 CCHCR1Q8TD31 782 aa6.77□□□□□ -1.33
MRE11-204ENST00000407439 NLRP7Q8WX94 980 aa6.77□□□□□ -1.33
MRE11-204ENST00000407439 SLITRK1Q96PX8 696 aa6.77□□□□□ -1.33
MRE11-204ENST00000407439 TRAIPQ9BWF2 469 aa6.77□□□□□ -1.33
MRE11-204ENST00000407439 SEMA4AQ9H3S1 761 aa6.77□□□□□ -1.33
MRE11-204ENST00000407439 ZNF408Q9H9D4 720 aa6.77□□□□□ -1.33
MRE11-204ENST00000407439 GBA2Q9HCG7 927 aaPredicted RBP6.77□□□□□ -1.33
MRE11-204ENST00000407439 ASIC3Q9UHC3 531 aa6.77□□□□□ -1.33
MRE11-204ENST00000407439 POLIQ9UNA4 740 aa6.77□□□□□ -1.33
MRE11-204ENST00000407439 EFR3BQ9Y2G0 817 aa6.77□□□□□ -1.33
MRE11-204ENST00000407439 R3HDM2Q9Y2K5 976 aaKnown RBP6.77□□□□□ -1.33
MRE11-204ENST00000407439 RRN3P2A6NIE6 340 aa6.76□□□□□ -1.33
MRE11-204ENST00000407439 F8VP50 259 aa6.76□□□□□ -1.33
MRE11-204ENST00000407439 RIPK2O43353 540 aa6.76□□□□□ -1.33
MRE11-204ENST00000407439 CSDE1O75534 798 aaKnown RBP6.76□□□□□ -1.33
MRE11-204ENST00000407439 TJP3O95049 919 aa6.76□□□□□ -1.33
MRE11-204ENST00000407439 GJB6O95452 261 aa6.76□□□□□ -1.33
MRE11-204ENST00000407439 F2P00734 622 aa6.76□□□□□ -1.33
MRE11-204ENST00000407439 CD19P15391 556 aa6.76□□□□□ -1.33
MRE11-204ENST00000407439 GRM5P41594 1212 aa6.76□□□□□ -1.33
MRE11-204ENST00000407439 GABRB2P47870 512 aa6.76□□□□□ -1.33
MRE11-204ENST00000407439 ATP1A2P50993 1020 aa6.76□□□□□ -1.33
MRE11-204ENST00000407439 OGDHQ02218 1023 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms