RNA–Protein interactions for RNA: ENST00000406477.7

PARVB-204, Transcript of parvin beta, humanhuman

TSL 1 (best) BASIC

Gene PARVB, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-204ENST00000406477 AMACRQ9UHK6 382 aa17.16■□□□□ 0.34
PARVB-204ENST00000406477 HPCAL4Q9UM19 191 aa17.16■□□□□ 0.34
PARVB-204ENST00000406477 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.16■□□□□ 0.34
PARVB-204ENST00000406477 MYADML2A6NDP7 307 aa17.15■□□□□ 0.34
PARVB-204ENST00000406477 SIGLEC16A6NMB1 481 aa17.15■□□□□ 0.34
PARVB-204ENST00000406477 PODXLO00592 558 aa17.15■□□□□ 0.34
PARVB-204ENST00000406477 CAPN15O75808 1086 aa17.15■□□□□ 0.34
PARVB-204ENST00000406477 MICAL2O94851 1124 aa17.15■□□□□ 0.34
PARVB-204ENST00000406477 FNTAP49354 379 aa17.15■□□□□ 0.34
PARVB-204ENST00000406477 AARSP49588 968 aaKnown RBP eCLIP17.15■□□□□ 0.34
PARVB-204ENST00000406477 CARSP49589 748 aaKnown RBP17.15■□□□□ 0.34
PARVB-204ENST00000406477 NDST1P52848 882 aa17.15■□□□□ 0.34
PARVB-204ENST00000406477 SNX16P57768 344 aa17.15■□□□□ 0.34
PARVB-204ENST00000406477 FAM193AP78312 1265 aa17.15■□□□□ 0.34
PARVB-204ENST00000406477 PRKCZQ05513 592 aa17.15■□□□□ 0.34
PARVB-204ENST00000406477 GABPB1Q06547 395 aaPredicted RBP17.15■□□□□ 0.34
PARVB-204ENST00000406477 C2CD6Q53TS8 623 aa17.15■□□□□ 0.34
PARVB-204ENST00000406477 UBXN11Q5T124 520 aa17.15■□□□□ 0.34
PARVB-204ENST00000406477 ALS2CLQ60I27 953 aa17.15■□□□□ 0.34
PARVB-204ENST00000406477 GSPT2Q8IYD1 628 aaKnown RBP17.15■□□□□ 0.34
PARVB-204ENST00000406477 KATNAL2Q8IYT4 538 aa17.15■□□□□ 0.34
PARVB-204ENST00000406477 MREGQ8N565 214 aa17.15■□□□□ 0.34
PARVB-204ENST00000406477 NIPA2Q8N8Q9 360 aa17.15■□□□□ 0.34
PARVB-204ENST00000406477 C12orf50Q8NA57 414 aaPredicted RBP17.15■□□□□ 0.34
PARVB-204ENST00000406477 IPO4Q8TEX9 1081 aaKnown RBP17.15■□□□□ 0.34
PARVB-204ENST00000406477 FNIP1Q8TF40 1166 aa17.15■□□□□ 0.34
PARVB-204ENST00000406477 SEC14L1Q92503 715 aa17.15■□□□□ 0.34
PARVB-204ENST00000406477 DDX27Q96GQ7 796 aaKnown RBP17.15■□□□□ 0.34
PARVB-204ENST00000406477 ZMAT2Q96NC0 199 aaKnown RBP17.15■□□□□ 0.34
PARVB-204ENST00000406477 SYNCQ9H7C4 482 aa17.15■□□□□ 0.34
PARVB-204ENST00000406477 XPNPEP3Q9NQH7 507 aa17.15■□□□□ 0.34
PARVB-204ENST00000406477 NFU1Q9UMS0 254 aa17.15■□□□□ 0.34
PARVB-204ENST00000406477 O00370 1275 aa17.15■□□□□ 0.34
PARVB-204ENST00000406477 FAM163BP0C2L3 166 aa17.15■□□□□ 0.34
PARVB-204ENST00000406477 SETSIPP0DME0 302 aa17.15■□□□□ 0.34
PARVB-204ENST00000406477 CST5P28325 142 aaPredicted RBP17.15■□□□□ 0.34
PARVB-204ENST00000406477 DRG2P55039 364 aaKnown RBP17.15■□□□□ 0.34
PARVB-204ENST00000406477 CACNB2Q08289 660 aaPredicted RBP17.15■□□□□ 0.34
PARVB-204ENST00000406477 PPP1R15BQ5SWA1 713 aa17.15■□□□□ 0.34
PARVB-204ENST00000406477 C9orf57Q5W0N0 161 aa17.15■□□□□ 0.34
PARVB-204ENST00000406477 LCLAT1Q6UWP7 414 aa17.15■□□□□ 0.34
PARVB-204ENST00000406477 CXCL17Q6UXB2 119 aa17.15■□□□□ 0.34
PARVB-204ENST00000406477 PCSK9Q8NBP7 692 aaKnown RBP17.15■□□□□ 0.34
PARVB-204ENST00000406477 EXD1Q8NHP7 514 aa17.15■□□□□ 0.34
PARVB-204ENST00000406477 PPP1R13LQ8WUF5 828 aa17.15■□□□□ 0.34
PARVB-204ENST00000406477 RBM41Q96IZ5 413 aaKnown RBP17.15■□□□□ 0.34
PARVB-204ENST00000406477 APOL6Q9BWW8 343 aa17.15■□□□□ 0.34
PARVB-204ENST00000406477 CFHR5Q9BXR6 569 aa17.15■□□□□ 0.34
PARVB-204ENST00000406477 TRIM7Q9C029 511 aa17.15■□□□□ 0.34
PARVB-204ENST00000406477 FEZ2Q9UHY8 353 aaPredicted RBP17.15■□□□□ 0.34
PARVB-204ENST00000406477 CDY2AQ9Y6F7 541 aa17.15■□□□□ 0.34
PARVB-204ENST00000406477 SMIM28A0A1B0GU29 152 aa17.14■□□□□ 0.33
PARVB-204ENST00000406477 M0QYV0 167 aa17.14■□□□□ 0.33
PARVB-204ENST00000406477 TTI1O43156 1089 aa17.14■□□□□ 0.33
PARVB-204ENST00000406477 ADAMTS4O75173 837 aa17.14■□□□□ 0.33
PARVB-204ENST00000406477 PGK1P00558 417 aa17.14■□□□□ 0.33
PARVB-204ENST00000406477 OAS2P29728 719 aaKnown RBP17.14■□□□□ 0.33
PARVB-204ENST00000406477 GABRB2P47870 512 aa17.14■□□□□ 0.33
PARVB-204ENST00000406477 HLTFQ14527 1009 aaKnown RBP eCLIP17.14■□□□□ 0.33
PARVB-204ENST00000406477 DEFB115Q30KQ5 88 aa17.14■□□□□ 0.33
PARVB-204ENST00000406477 TWF2Q6IBS0 349 aaKnown RBP17.14■□□□□ 0.33
PARVB-204ENST00000406477 SERINC5Q86VE9 423 aa17.14■□□□□ 0.33
PARVB-204ENST00000406477 FAM228AQ86W67 206 aa17.14■□□□□ 0.33
PARVB-204ENST00000406477 RCOR2Q8IZ40 523 aa17.14■□□□□ 0.33
PARVB-204ENST00000406477 PRELID2Q8N945 189 aa17.14■□□□□ 0.33
PARVB-204ENST00000406477 FAM71BQ8TC56 605 aa17.14■□□□□ 0.33
PARVB-204ENST00000406477 LRRC45Q96CN5 670 aa17.14■□□□□ 0.33
PARVB-204ENST00000406477 MCEEQ96PE7 176 aa17.14■□□□□ 0.33
PARVB-204ENST00000406477 TWNKQ96RR1 684 aa17.14■□□□□ 0.33
PARVB-204ENST00000406477 LRRC19Q9H756 370 aa17.14■□□□□ 0.33
PARVB-204ENST00000406477 DDX56Q9NY93 547 aaKnown RBP17.14■□□□□ 0.33
PARVB-204ENST00000406477 HES2Q9Y543 173 aa17.14■□□□□ 0.33
PARVB-204ENST00000406477 IPPQ9Y573 584 aa17.14■□□□□ 0.33
PARVB-204ENST00000406477 SNX9Q9Y5X1 595 aa17.14■□□□□ 0.33
PARVB-204ENST00000406477 CASP8AP2Q9UKL3 1982 aa17.14■□□□□ 0.33
PARVB-204ENST00000406477 SCN10AQ9Y5Y9 1956 aa17.13■□□□□ 0.33
PARVB-204ENST00000406477 PIRO00625 290 aa17.13■□□□□ 0.33
PARVB-204ENST00000406477 HSF2BPO75031 334 aa17.13■□□□□ 0.33
PARVB-204ENST00000406477 RPS6KA5O75582 802 aa17.13■□□□□ 0.33
PARVB-204ENST00000406477 CABYRO75952 493 aa17.13■□□□□ 0.33
PARVB-204ENST00000406477 TOMM70O94826 608 aa17.13■□□□□ 0.33
PARVB-204ENST00000406477 KRT3P12035 628 aa17.13■□□□□ 0.33
PARVB-204ENST00000406477 AKAP5P24588 427 aa17.13■□□□□ 0.33
PARVB-204ENST00000406477 SSR1P43307 286 aaKnown RBP17.13■□□□□ 0.33
PARVB-204ENST00000406477 PSMC1P62191 440 aaKnown RBP17.13■□□□□ 0.33
PARVB-204ENST00000406477 ACAP1Q15027 740 aa17.13■□□□□ 0.33
PARVB-204ENST00000406477 SV2CQ496J9 727 aa17.13■□□□□ 0.33
PARVB-204ENST00000406477 PTPN20Q4JDL3 420 aa17.13■□□□□ 0.33
PARVB-204ENST00000406477 FAM47CQ5HY64 1035 aa17.13■□□□□ 0.33
PARVB-204ENST00000406477 FBXO47Q5MNV8 452 aa17.13■□□□□ 0.33
PARVB-204ENST00000406477 AADACL2Q6P093 401 aa17.13■□□□□ 0.33
PARVB-204ENST00000406477 LLGL2Q6P1M3 1020 aa17.13■□□□□ 0.33
PARVB-204ENST00000406477 ADAT2Q7Z6V5 191 aaKnown RBP17.13■□□□□ 0.33
PARVB-204ENST00000406477 CPNE8Q86YQ8 564 aa17.13■□□□□ 0.33
PARVB-204ENST00000406477 GOLGA6L1Q8N7Z2 621 aa17.13■□□□□ 0.33
PARVB-204ENST00000406477 KLHDC9Q8NEP7 349 aa17.13■□□□□ 0.33
PARVB-204ENST00000406477 HINFPQ9BQA5 517 aa17.13■□□□□ 0.33
PARVB-204ENST00000406477 ERP44Q9BS26 406 aa17.13■□□□□ 0.33
PARVB-204ENST00000406477 FAM129AQ9BZQ8 928 aa17.13■□□□□ 0.33
PARVB-204ENST00000406477 GDAP2Q9NXN4 497 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms