RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 LRRIQ4A6NIV6 560 aa10.4□□□□□ -0.74
MSH2-202ENST00000406134 ARIH2O95376 493 aa10.4□□□□□ -0.74
MSH2-202ENST00000406134 CD48P09326 243 aa10.4□□□□□ -0.74
MSH2-202ENST00000406134 IQCF3P0C7M6 154 aa10.4□□□□□ -0.74
MSH2-202ENST00000406134 HIRAP54198 1017 aaPredicted RBP10.4□□□□□ -0.74
MSH2-202ENST00000406134 RIPK1Q13546 671 aa10.4□□□□□ -0.74
MSH2-202ENST00000406134 PKN2Q16513 984 aaKnown RBP10.4□□□□□ -0.74
MSH2-202ENST00000406134 PTPN20Q4JDL3 420 aa10.4□□□□□ -0.74
MSH2-202ENST00000406134 WDR44Q5JSH3 913 aa10.4□□□□□ -0.74
MSH2-202ENST00000406134 FNBP1LQ5T0N5 605 aa10.4□□□□□ -0.74
MSH2-202ENST00000406134 TREML2Q5T2D2 321 aa10.4□□□□□ -0.74
MSH2-202ENST00000406134 LRRC38Q5VT99 294 aa10.4□□□□□ -0.74
MSH2-202ENST00000406134 RGS9BPQ6ZS82 235 aa10.4□□□□□ -0.74
MSH2-202ENST00000406134 SPATA21Q7Z572 469 aa10.4□□□□□ -0.74
MSH2-202ENST00000406134 USP37Q86T82 979 aa10.4□□□□□ -0.74
MSH2-202ENST00000406134 TMEM192Q8IY95 271 aa10.4□□□□□ -0.74
MSH2-202ENST00000406134 CCDC89Q8N998 374 aa10.4□□□□□ -0.74
MSH2-202ENST00000406134 JOSD2Q8TAC2 188 aa10.4□□□□□ -0.74
MSH2-202ENST00000406134 KLRG1Q96E93 195 aa10.4□□□□□ -0.74
MSH2-202ENST00000406134 SCLT1Q96NL6 688 aa10.4□□□□□ -0.74
MSH2-202ENST00000406134 FNBP1Q96RU3 617 aa10.4□□□□□ -0.74
MSH2-202ENST00000406134 TEX13BQ9BXU2 312 aa10.4□□□□□ -0.74
MSH2-202ENST00000406134 STK32BQ9NY57 414 aa10.4□□□□□ -0.74
MSH2-202ENST00000406134 BTBD7Q9P203 1132 aa10.4□□□□□ -0.74
MSH2-202ENST00000406134 SCINQ9Y6U3 715 aa10.4□□□□□ -0.74
MSH2-202ENST00000406134 A0A1W2PPM1 405 aa10.4□□□□□ -0.75
MSH2-202ENST00000406134 C1QAP02745 245 aa10.4□□□□□ -0.75
MSH2-202ENST00000406134 NQO1P15559 274 aaKnown RBP10.4□□□□□ -0.75
MSH2-202ENST00000406134 GJC1P36383 396 aa10.4□□□□□ -0.75
MSH2-202ENST00000406134 NRLP54845 237 aa10.4□□□□□ -0.75
MSH2-202ENST00000406134 GRM1Q13255 1194 aa10.4□□□□□ -0.75
MSH2-202ENST00000406134 SLC1A5Q15758 541 aa10.4□□□□□ -0.75
MSH2-202ENST00000406134 RAB6CQ53S08 254 aa10.4□□□□□ -0.75
MSH2-202ENST00000406134 RNF43Q68DV7 783 aa10.4□□□□□ -0.75
MSH2-202ENST00000406134 ZNF772Q68DY9 489 aaPredicted RBP10.4□□□□□ -0.75
MSH2-202ENST00000406134 TRNP1Q6NT89 227 aa10.4□□□□□ -0.75
MSH2-202ENST00000406134 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.4□□□□□ -0.75
MSH2-202ENST00000406134 ACO2Q99798 780 aaKnown RBP10.4□□□□□ -0.75
MSH2-202ENST00000406134 TMEM121Q9BTD3 319 aa10.4□□□□□ -0.75
MSH2-202ENST00000406134 PLVAPQ9BX97 442 aa10.4□□□□□ -0.75
MSH2-202ENST00000406134 MAK16Q9BXY0 300 aaKnown RBP10.4□□□□□ -0.75
MSH2-202ENST00000406134 RAB6CQ9H0N0 254 aa10.4□□□□□ -0.75
MSH2-202ENST00000406134 MRPL47Q9HD33 250 aaKnown RBP10.4□□□□□ -0.75
MSH2-202ENST00000406134 CISHQ9NSE2 258 aa10.4□□□□□ -0.75
MSH2-202ENST00000406134 SAMD15Q9P1V8 674 aa10.4□□□□□ -0.75
MSH2-202ENST00000406134 KANSL3Q9P2N6 904 aa10.4□□□□□ -0.75
MSH2-202ENST00000406134 IP6K2Q9UHH9 426 aa10.4□□□□□ -0.75
MSH2-202ENST00000406134 DRG1Q9Y295 367 aaKnown RBP10.4□□□□□ -0.75
MSH2-202ENST00000406134 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.4□□□□□ -0.75
MSH2-202ENST00000406134 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.4□□□□□ -0.75
MSH2-202ENST00000406134 K7ERI5 159 aa10.39□□□□□ -0.75
MSH2-202ENST00000406134 MAFO75444 373 aaPredicted RBP10.39□□□□□ -0.75
MSH2-202ENST00000406134 PIAS1O75925 651 aa10.39□□□□□ -0.75
MSH2-202ENST00000406134 ITGAVP06756 1048 aa10.39□□□□□ -0.75
MSH2-202ENST00000406134 TBXAS1P24557 533 aaPredicted RBP10.39□□□□□ -0.75
MSH2-202ENST00000406134 VCPP55072 806 aaKnown RBP10.39□□□□□ -0.75
MSH2-202ENST00000406134 TNFAIP1Q13829 316 aa10.39□□□□□ -0.75
MSH2-202ENST00000406134 STAT4Q14765 748 aa10.39□□□□□ -0.75
MSH2-202ENST00000406134 ZKSCAN8Q15776 578 aaPredicted RBP10.39□□□□□ -0.75
MSH2-202ENST00000406134 KAZNQ674X7 775 aa10.39□□□□□ -0.75
MSH2-202ENST00000406134 DENND1BQ6P3S1 775 aa10.39□□□□□ -0.75
MSH2-202ENST00000406134 DLK2Q6UY11 383 aa10.39□□□□□ -0.75
MSH2-202ENST00000406134 WDR49Q8IV35 697 aa10.39□□□□□ -0.75
MSH2-202ENST00000406134 RCOR2Q8IZ40 523 aa10.39□□□□□ -0.75
MSH2-202ENST00000406134 ZBTB10Q96DT7 871 aa10.39□□□□□ -0.75
MSH2-202ENST00000406134 ECT2Q9H8V3 914 aa10.39□□□□□ -0.75
MSH2-202ENST00000406134 EBF2Q9HAK2 575 aa10.39□□□□□ -0.75
MSH2-202ENST00000406134 RXFP1Q9HBX9 757 aa10.39□□□□□ -0.75
MSH2-202ENST00000406134 SLCO1B3Q9NPD5 702 aa10.39□□□□□ -0.75
MSH2-202ENST00000406134 HMGXB4Q9UGU5 601 aa10.39□□□□□ -0.75
MSH2-202ENST00000406134 RABGEF1Q9UJ41 708 aa10.39□□□□□ -0.75
MSH2-202ENST00000406134 TSC2P49815 1807 aa10.39□□□□□ -0.75
MSH2-202ENST00000406134 IGKV6-21A0A0C4DH24 114 aa10.39□□□□□ -0.75
MSH2-202ENST00000406134 FZD9O00144 591 aa10.39□□□□□ -0.75
MSH2-202ENST00000406134 ALOX15BO15296 676 aa10.39□□□□□ -0.75
MSH2-202ENST00000406134 LRCH4O75427 683 aa10.39□□□□□ -0.75
MSH2-202ENST00000406134 T-ENOLP0DO92 83 aa10.39□□□□□ -0.75
MSH2-202ENST00000406134 RPA3P35244 121 aaPredicted RBP10.39□□□□□ -0.75
MSH2-202ENST00000406134 ARSEP51690 589 aa10.39□□□□□ -0.75
MSH2-202ENST00000406134 SLC18A1P54219 525 aa10.39□□□□□ -0.75
MSH2-202ENST00000406134 MCL1Q07820 350 aa10.39□□□□□ -0.75
MSH2-202ENST00000406134 TAF5Q15542 800 aa10.39□□□□□ -0.75
MSH2-202ENST00000406134 NAT8LQ8N9F0 302 aa10.39□□□□□ -0.75
MSH2-202ENST00000406134 TRPM4Q8TD43 1214 aa10.39□□□□□ -0.75
MSH2-202ENST00000406134 HAUS1Q96CS2 278 aa10.39□□□□□ -0.75
MSH2-202ENST00000406134 PLAC1Q9HBJ0 212 aa10.39□□□□□ -0.75
MSH2-202ENST00000406134 TCEAL9Q9UHQ7 104 aa10.39□□□□□ -0.75
MSH2-202ENST00000406134 SIX4Q9UIU6 781 aa10.39□□□□□ -0.75
MSH2-202ENST00000406134 CHKBQ9Y259 395 aa10.39□□□□□ -0.75
MSH2-202ENST00000406134 ZNF236Q9UL36 1845 aa10.39□□□□□ -0.75
MSH2-202ENST00000406134 H0YCG3 227 aa10.39□□□□□ -0.75
MSH2-202ENST00000406134 SPAG7O75391 227 aa10.39□□□□□ -0.75
MSH2-202ENST00000406134 TMED2Q15363 201 aa10.39□□□□□ -0.75
MSH2-202ENST00000406134 PLEKHG4Q58EX7 1191 aa10.39□□□□□ -0.75
MSH2-202ENST00000406134 CYP4F22Q6NT55 531 aa10.39□□□□□ -0.75
MSH2-202ENST00000406134 TBC1D1Q86TI0 1168 aaPredicted RBP10.39□□□□□ -0.75
MSH2-202ENST00000406134 KIF2BQ8N4N8 673 aa10.39□□□□□ -0.75
MSH2-202ENST00000406134 CPT1BQ92523 772 aa10.39□□□□□ -0.75
MSH2-202ENST00000406134 TWNKQ96RR1 684 aa10.39□□□□□ -0.75
MSH2-202ENST00000406134 SAYSD1Q9NPB0 183 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms