RNA–Protein interactions for RNA: ENST00000405675.7

CSNK1E-205, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-205ENST00000405675 PRMT2P55345 433 aa30.73■■■□□ 2.51
CSNK1E-205ENST00000405675 TAS2R40P59535 323 aa30.73■■■□□ 2.51
CSNK1E-205ENST00000405675 PCSK9Q8NBP7 692 aaKnown RBP30.73■■■□□ 2.51
CSNK1E-205ENST00000405675 DDX27Q96GQ7 796 aaKnown RBP30.73■■■□□ 2.51
CSNK1E-205ENST00000405675 SIX1Q15475 284 aaPredicted RBP30.72■■■□□ 2.51
CSNK1E-205ENST00000405675 CYP4A22Q5TCH4 519 aa30.72■■■□□ 2.51
CSNK1E-205ENST00000405675 APBB1IPQ7Z5R6 666 aaPredicted RBP30.72■■■□□ 2.51
CSNK1E-205ENST00000405675 RNF180Q86T96 592 aa30.72■■■□□ 2.51
CSNK1E-205ENST00000405675 HMX1Q9NP08 348 aaPredicted RBP30.72■■■□□ 2.51
CSNK1E-205ENST00000405675 TUBGCP4Q9UGJ1 667 aa30.72■■■□□ 2.51
CSNK1E-205ENST00000405675 PIN4Q9Y237 131 aaKnown RBP30.72■■■□□ 2.51
CSNK1E-205ENST00000405675 HSPA6P17066 643 aa30.71■■■□□ 2.51
CSNK1E-205ENST00000405675 PTPN11Q06124 597 aaPredicted RBP30.71■■■□□ 2.51
CSNK1E-205ENST00000405675 PCBP1Q15365 356 aaKnown RBP eCLIP30.71■■■□□ 2.51
CSNK1E-205ENST00000405675 TAF2Q6P1X5 1199 aa30.71■■■□□ 2.51
CSNK1E-205ENST00000405675 ERICH1Q86X53 443 aa30.71■■■□□ 2.51
CSNK1E-205ENST00000405675 NME8Q8N427 588 aa30.71■■■□□ 2.51
CSNK1E-205ENST00000405675 C18orf8Q96DM3 657 aa30.71■■■□□ 2.51
CSNK1E-205ENST00000405675 TMEM176AQ96HP8 235 aa30.71■■■□□ 2.51
CSNK1E-205ENST00000405675 APOL6Q9BWW8 343 aa30.71■■■□□ 2.51
CSNK1E-205ENST00000405675 PRDM10Q9NQV6 1147 aa30.71■■■□□ 2.51
CSNK1E-205ENST00000405675 TJP2Q9UDY2 1190 aa30.71■■■□□ 2.51
CSNK1E-205ENST00000405675 BRCA2P51587 3418 aa30.71■■■□□ 2.51
CSNK1E-205ENST00000405675 TRIP11Q15643 1979 aa30.71■■■□□ 2.51
CSNK1E-205ENST00000405675 TMEM191CA6NGB0 347 aa30.71■■■□□ 2.51
CSNK1E-205ENST00000405675 PHF2O75151 1096 aa30.71■■■□□ 2.51
CSNK1E-205ENST00000405675 STAU1O95793 577 aaKnown RBP30.71■■■□□ 2.51
CSNK1E-205ENST00000405675 P4HA1P13674 534 aa30.71■■■□□ 2.51
CSNK1E-205ENST00000405675 AARSP49588 968 aaKnown RBP eCLIP30.71■■■□□ 2.51
CSNK1E-205ENST00000405675 GPS2Q13227 327 aa30.71■■■□□ 2.51
CSNK1E-205ENST00000405675 NNTQ13423 1086 aa30.71■■■□□ 2.51
CSNK1E-205ENST00000405675 GLRA4Q5JXX5 417 aa30.71■■■□□ 2.51
CSNK1E-205ENST00000405675 LHX8Q68G74 356 aa30.71■■■□□ 2.51
CSNK1E-205ENST00000405675 C18orf25Q96B23 403 aaPredicted RBP30.71■■■□□ 2.51
CSNK1E-205ENST00000405675 BEGAINQ9BUH8 593 aa30.71■■■□□ 2.51
CSNK1E-205ENST00000405675 NEUROG2Q9H2A3 272 aa30.71■■■□□ 2.51
CSNK1E-205ENST00000405675 LHX5Q9H2C1 402 aa30.71■■■□□ 2.51
CSNK1E-205ENST00000405675 ACBD3Q9H3P7 528 aa30.71■■■□□ 2.51
CSNK1E-205ENST00000405675 USTQ9Y2C2 406 aa30.71■■■□□ 2.51
CSNK1E-205ENST00000405675 DAPK3O43293 454 aa30.7■■■□□ 2.51
CSNK1E-205ENST00000405675 RARAP10276 462 aa30.7■■■□□ 2.51
CSNK1E-205ENST00000405675 AKAP5P24588 427 aa30.7■■■□□ 2.51
CSNK1E-205ENST00000405675 DR1Q01658 176 aa30.7■■■□□ 2.51
CSNK1E-205ENST00000405675 ZBTB6Q15916 424 aa30.7■■■□□ 2.51
CSNK1E-205ENST00000405675 PTPN20Q4JDL3 420 aa30.7■■■□□ 2.51
CSNK1E-205ENST00000405675 TTC27Q6P3X3 843 aa30.7■■■□□ 2.51
CSNK1E-205ENST00000405675 ALKAL1Q6UXT8 129 aa30.7■■■□□ 2.51
CSNK1E-205ENST00000405675 WNT8BQ93098 351 aa30.7■■■□□ 2.51
CSNK1E-205ENST00000405675 DERAQ9Y315 318 aa30.7■■■□□ 2.51
CSNK1E-205ENST00000405675 AGPSO00116 658 aa30.7■■■□□ 2.5
CSNK1E-205ENST00000405675 MED7O43513 233 aa30.7■■■□□ 2.5
CSNK1E-205ENST00000405675 RECQL4O94761 1208 aa30.7■■■□□ 2.5
CSNK1E-205ENST00000405675 ZNF252P-AS1Q0IIN9 211 aa30.7■■■□□ 2.5
CSNK1E-205ENST00000405675 CUL1Q13616 776 aa30.7■■■□□ 2.5
CSNK1E-205ENST00000405675 PPP2R5EQ16537 467 aa30.7■■■□□ 2.5
CSNK1E-205ENST00000405675 UBXN11Q5T124 520 aa30.7■■■□□ 2.5
CSNK1E-205ENST00000405675 DNAJC24Q6P3W2 148 aa30.7■■■□□ 2.5
CSNK1E-205ENST00000405675 SH3TC2Q8TF17 1288 aa30.7■■■□□ 2.5
CSNK1E-205ENST00000405675 SEC14L1Q92503 715 aa30.7■■■□□ 2.5
CSNK1E-205ENST00000405675 MCEEQ96PE7 176 aa30.7■■■□□ 2.5
CSNK1E-205ENST00000405675 CEP83Q9Y592 693 aa30.7■■■□□ 2.5
CSNK1E-205ENST00000405675 YARSP54577 528 aaKnown RBP30.69■■■□□ 2.5
CSNK1E-205ENST00000405675 OGDHQ02218 1023 aa30.69■■■□□ 2.5
CSNK1E-205ENST00000405675 PPP1R15BQ5SWA1 713 aa30.69■■■□□ 2.5
CSNK1E-205ENST00000405675 MAGOHBQ96A72 148 aaKnown RBP30.69■■■□□ 2.5
CSNK1E-205ENST00000405675 HERPUD2Q9BSE4 406 aa30.69■■■□□ 2.5
CSNK1E-205ENST00000405675 TRIM6Q9C030 488 aaPredicted RBP30.69■■■□□ 2.5
CSNK1E-205ENST00000405675 SYF2O95926 243 aaKnown RBP30.68■■■□□ 2.5
CSNK1E-205ENST00000405675 PTGIRP43119 386 aa30.68■■■□□ 2.5
CSNK1E-205ENST00000405675 ACLYP53396 1101 aa30.68■■■□□ 2.5
CSNK1E-205ENST00000405675 CRYBB1P53674 252 aaPredicted RBP30.68■■■□□ 2.5
CSNK1E-205ENST00000405675 INCA1Q0VD86 236 aa30.68■■■□□ 2.5
CSNK1E-205ENST00000405675 HLTFQ14527 1009 aaKnown RBP eCLIP30.68■■■□□ 2.57e-7■■■□□ 14.7
CSNK1E-205ENST00000405675 GADD45GIP1Q8TAE8 222 aaPredicted RBP30.68■■■□□ 2.5
CSNK1E-205ENST00000405675 RNF39Q9H2S5 420 aa30.68■■■□□ 2.5
CSNK1E-205ENST00000405675 BARX2Q9UMQ3 279 aaPredicted RBP30.68■■■□□ 2.5
CSNK1E-205ENST00000405675 RALGAPA2Q2PPJ7 1873 aa30.68■■■□□ 2.5
CSNK1E-205ENST00000405675 AXLP30530 894 aa30.68■■■□□ 2.5
CSNK1E-205ENST00000405675 NDST1P52848 882 aa30.68■■■□□ 2.5
CSNK1E-205ENST00000405675 DPH5Q9H2P9 285 aa30.68■■■□□ 2.5
CSNK1E-205ENST00000405675 CNTN3Q9P232 1028 aa30.68■■■□□ 2.5
CSNK1E-205ENST00000405675 IP6K2Q9UHH9 426 aa30.68■■■□□ 2.5
CSNK1E-205ENST00000405675 MICAL2O94851 1124 aa30.67■■■□□ 2.5
CSNK1E-205ENST00000405675 GGCXP38435 758 aa30.67■■■□□ 2.5
CSNK1E-205ENST00000405675 GABPB1Q06547 395 aaPredicted RBP30.67■■■□□ 2.5
CSNK1E-205ENST00000405675 SESTD1Q86VW0 696 aa30.67■■■□□ 2.5
CSNK1E-205ENST00000405675 EIF1ADQ8N9N8 165 aaKnown RBP30.67■■■□□ 2.5
CSNK1E-205ENST00000405675 RIN2Q8WYP3 895 aaPredicted RBP30.67■■■□□ 2.5
CSNK1E-205ENST00000405675 SLTMQ9NWH9 1034 aaKnown RBP eCLIP30.67■■■□□ 2.54e-10■■■■□ 20.9
CSNK1E-205ENST00000405675 FSCN2O14926 492 aa30.67■■■□□ 2.5
CSNK1E-205ENST00000405675 TCF4P15884 667 aa30.67■■■□□ 2.5
CSNK1E-205ENST00000405675 CHRNA3P32297 505 aa30.67■■■□□ 2.5
CSNK1E-205ENST00000405675 MAN1A1P33908 653 aa30.67■■■□□ 2.5
CSNK1E-205ENST00000405675 FAM193AP78312 1265 aa30.67■■■□□ 2.5
CSNK1E-205ENST00000405675 CYP1B1Q16678 543 aa30.67■■■□□ 2.5
CSNK1E-205ENST00000405675 SERINC5Q86VE9 423 aa30.67■■■□□ 2.5
CSNK1E-205ENST00000405675 HEXIM2Q96MH2 286 aaKnown RBP30.67■■■□□ 2.5
CSNK1E-205ENST00000405675 TRIM31Q9BZY9 425 aa30.67■■■□□ 2.5
CSNK1E-205ENST00000405675 KLK14Q9P0G3 267 aa30.67■■■□□ 2.5
CSNK1E-205ENST00000405675 UTP11Q9Y3A2 253 aaKnown RBP30.67■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms