RNA–Protein interactions for RNA: ENST00000404914.7

ATG4B-205, Transcript of autophagy related 4B cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4B, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-205ENST00000404914 SKA1Q96BD8 255 aa16.35■□□□□ 0.21
ATG4B-205ENST00000404914 NSL1Q96IY1 281 aa16.35■□□□□ 0.21
ATG4B-205ENST00000404914 CLPTM1LQ96KA5 538 aa16.35■□□□□ 0.21
ATG4B-205ENST00000404914 TMEM121Q9BTD3 319 aa16.35■□□□□ 0.21
ATG4B-205ENST00000404914 AVENQ9NQS1 362 aaPredicted RBP16.35■□□□□ 0.21
ATG4B-205ENST00000404914 SAE1Q9UBE0 346 aaPredicted RBP16.35■□□□□ 0.21
ATG4B-205ENST00000404914 RPL26L1Q9UNX3 145 aaKnown RBP16.35■□□□□ 0.21
ATG4B-205ENST00000404914 H0YIN7 160 aa16.35■□□□□ 0.21
ATG4B-205ENST00000404914 ALOX15BO15296 676 aa16.35■□□□□ 0.21
ATG4B-205ENST00000404914 GH2P01242 217 aa16.35■□□□□ 0.21
ATG4B-205ENST00000404914 SKIP12755 728 aa16.35■□□□□ 0.21
ATG4B-205ENST00000404914 NPR1P16066 1061 aa16.35■□□□□ 0.21
ATG4B-205ENST00000404914 GLRA2P23416 452 aa16.35■□□□□ 0.21
ATG4B-205ENST00000404914 SLC1A1P43005 524 aa16.35■□□□□ 0.21
ATG4B-205ENST00000404914 RARRES1P49788 294 aa16.35■□□□□ 0.21
ATG4B-205ENST00000404914 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.35■□□□□ 0.21
ATG4B-205ENST00000404914 RHOT1Q8IXI2 618 aa16.35■□□□□ 0.21
ATG4B-205ENST00000404914 KCTD17Q8N5Z5 321 aa16.35■□□□□ 0.21
ATG4B-205ENST00000404914 MASTLQ96GX5 879 aa16.35■□□□□ 0.21
ATG4B-205ENST00000404914 GMCL1Q96IK5 515 aa16.35■□□□□ 0.21
ATG4B-205ENST00000404914 COQ4Q9Y3A0 265 aa16.35■□□□□ 0.21
ATG4B-205ENST00000404914 DENND3A2RUS2 1198 aa16.34■□□□□ 0.21
ATG4B-205ENST00000404914 IFNB1P01574 187 aa16.34■□□□□ 0.21
ATG4B-205ENST00000404914 RPL7AP62424 266 aaKnown RBP16.34■□□□□ 0.21
ATG4B-205ENST00000404914 GTF2BQ00403 316 aa16.34■□□□□ 0.21
ATG4B-205ENST00000404914 AP1B1Q10567 949 aa16.34■□□□□ 0.21
ATG4B-205ENST00000404914 NFX1Q12986 1120 aaKnown RBP16.34■□□□□ 0.21
ATG4B-205ENST00000404914 EFHC2Q5JST6 749 aa16.34■□□□□ 0.21
ATG4B-205ENST00000404914 SPDYAQ5MJ70 313 aa16.34■□□□□ 0.21
ATG4B-205ENST00000404914 FNBP1LQ5T0N5 605 aa16.34■□□□□ 0.21
ATG4B-205ENST00000404914 SLC39A4Q6P5W5 647 aa16.34■□□□□ 0.21
ATG4B-205ENST00000404914 ALYREFQ86V81 257 aaKnown RBP16.34■□□□□ 0.21
ATG4B-205ENST00000404914 KATNAL2Q8IYT4 538 aa16.34■□□□□ 0.21
ATG4B-205ENST00000404914 VPS52Q8N1B4 723 aa16.34■□□□□ 0.21
ATG4B-205ENST00000404914 MCUR1Q96AQ8 359 aa16.34■□□□□ 0.21
ATG4B-205ENST00000404914 TEKT3Q9BXF9 490 aa16.34■□□□□ 0.21
ATG4B-205ENST00000404914 MANSC1Q9H8J5 431 aa16.34■□□□□ 0.21
ATG4B-205ENST00000404914 USP1O94782 785 aa16.34■□□□□ 0.21
ATG4B-205ENST00000404914 TROVE2P10155 538 aaKnown RBP eCLIP16.34■□□□□ 0.214e-6■□□□□ 9.4
ATG4B-205ENST00000404914 ITGB5P18084 799 aa16.34■□□□□ 0.21
ATG4B-205ENST00000404914 ARFIP2P53365 341 aa16.34■□□□□ 0.21
ATG4B-205ENST00000404914 MAMLD1Q13495 774 aa16.34■□□□□ 0.21
ATG4B-205ENST00000404914 UGCGQ16739 394 aa16.34■□□□□ 0.21
ATG4B-205ENST00000404914 SCARA3Q6AZY7 606 aa16.34■□□□□ 0.21
ATG4B-205ENST00000404914 FAM43BQ6ZT52 329 aaPredicted RBP16.34■□□□□ 0.21
ATG4B-205ENST00000404914 ALLCQ8N6M5 410 aa16.34■□□□□ 0.21
ATG4B-205ENST00000404914 GORASP1Q9BQQ3 440 aa16.34■□□□□ 0.21
ATG4B-205ENST00000404914 TMEM8AQ9HCN3 771 aa16.34■□□□□ 0.21
ATG4B-205ENST00000404914 STX18Q9P2W9 335 aaKnown RBP16.34■□□□□ 0.21
ATG4B-205ENST00000404914 WNT7BP56706 349 aa16.33■□□□□ 0.21
ATG4B-205ENST00000404914 PTP4A2Q12974 167 aa16.33■□□□□ 0.21
ATG4B-205ENST00000404914 ZFYVE27Q5T4F4 411 aa16.33■□□□□ 0.21
ATG4B-205ENST00000404914 GMCL1P1Q8NEA9 526 aa16.33■□□□□ 0.21
ATG4B-205ENST00000404914 IL31RAQ8NI17 732 aa16.33■□□□□ 0.21
ATG4B-205ENST00000404914 TUBGCP5Q96RT8 1024 aa16.33■□□□□ 0.21
ATG4B-205ENST00000404914 PAFAH2Q99487 392 aa16.33■□□□□ 0.21
ATG4B-205ENST00000404914 NMUR2Q9GZQ4 415 aa16.33■□□□□ 0.21
ATG4B-205ENST00000404914 SYNCQ9H7C4 482 aa16.33■□□□□ 0.21
ATG4B-205ENST00000404914 SENP1Q9P0U3 644 aa16.33■□□□□ 0.21
ATG4B-205ENST00000404914 FAM237BA0A1B0GVD1 139 aa16.33■□□□□ 0.2
ATG4B-205ENST00000404914 TCRBV7S3A2A0A539 114 aa16.33■□□□□ 0.2
ATG4B-205ENST00000404914 PMM2O15305 246 aa16.33■□□□□ 0.2
ATG4B-205ENST00000404914 PSTPIP1O43586 416 aa16.33■□□□□ 0.2
ATG4B-205ENST00000404914 PYGLP06737 847 aa16.33■□□□□ 0.2
ATG4B-205ENST00000404914 BGNP21810 368 aa16.33■□□□□ 0.2
ATG4B-205ENST00000404914 YY1P25490 414 aa16.33■□□□□ 0.2
ATG4B-205ENST00000404914 CRKP46108 304 aa16.33■□□□□ 0.2
ATG4B-205ENST00000404914 NSFP46459 744 aaKnown RBP16.33■□□□□ 0.2
ATG4B-205ENST00000404914 ARL4CP56559 192 aa16.33■□□□□ 0.2
ATG4B-205ENST00000404914 TRAF1Q13077 416 aa16.33■□□□□ 0.2
ATG4B-205ENST00000404914 LAMB3Q13751 1172 aa16.33■□□□□ 0.2
ATG4B-205ENST00000404914 ABCB5Q2M3G0 1257 aa16.33■□□□□ 0.2
ATG4B-205ENST00000404914 HSF5Q4G112 596 aaPredicted RBP16.33■□□□□ 0.2
ATG4B-205ENST00000404914 PLA2G4FQ68DD2 849 aa16.33■□□□□ 0.2
ATG4B-205ENST00000404914 TREML1Q86YW5 311 aa16.33■□□□□ 0.2
ATG4B-205ENST00000404914 PDCD7Q8N8D1 485 aaKnown RBP16.33■□□□□ 0.2
ATG4B-205ENST00000404914 BANPQ8N9N5 519 aa16.33■□□□□ 0.2
ATG4B-205ENST00000404914 ZNF516Q92618 1163 aa16.33■□□□□ 0.2
ATG4B-205ENST00000404914 TEKT1Q969V4 418 aa16.33■□□□□ 0.2
ATG4B-205ENST00000404914 TIPINQ9BVW5 301 aa16.33■□□□□ 0.2
ATG4B-205ENST00000404914 TSSK1BQ9BXA7 367 aa16.33■□□□□ 0.2
ATG4B-205ENST00000404914 WDR11Q9BZH6 1224 aa16.33■□□□□ 0.2
ATG4B-205ENST00000404914 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.33■□□□□ 0.2
ATG4B-205ENST00000404914 DLDP09622 509 aaKnown RBP16.32■□□□□ 0.2
ATG4B-205ENST00000404914 NRLP54845 237 aa16.32■□□□□ 0.2
ATG4B-205ENST00000404914 GDF10P55107 478 aa16.32■□□□□ 0.2
ATG4B-205ENST00000404914 GEMIN4P57678 1058 aaKnown RBP16.32■□□□□ 0.2
ATG4B-205ENST00000404914 CDK16Q00536 496 aa16.32■□□□□ 0.2
ATG4B-205ENST00000404914 ZBTB16Q05516 673 aa16.32■□□□□ 0.2
ATG4B-205ENST00000404914 TATDN1Q6P1N9 297 aa16.32■□□□□ 0.2
ATG4B-205ENST00000404914 MIER3Q7Z3K6 550 aa16.32■□□□□ 0.2
ATG4B-205ENST00000404914 NLGN2Q8NFZ4 835 aa16.32■□□□□ 0.2
ATG4B-205ENST00000404914 EXD1Q8NHP7 514 aa16.32■□□□□ 0.2
ATG4B-205ENST00000404914 TTC25Q96NG3 672 aa16.32■□□□□ 0.2
ATG4B-205ENST00000404914 SLITRK1Q96PX8 696 aa16.32■□□□□ 0.2
ATG4B-205ENST00000404914 ZNF184Q99676 751 aaPredicted RBP16.32■□□□□ 0.2
ATG4B-205ENST00000404914 TRIM55Q9BYV6 548 aa16.32■□□□□ 0.2
ATG4B-205ENST00000404914 UBE2OQ9C0C9 1292 aaKnown RBP16.32■□□□□ 0.2
ATG4B-205ENST00000404914 ZNF395Q9H8N7 513 aaPredicted RBP16.32■□□□□ 0.2
ATG4B-205ENST00000404914 LRRC37AA6NMS7 1700 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms