RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 DEPDC1BQ8WUY9 529 aa16.55■□□□□ 0.24
TPM1-207ENST00000403994 C7orf25Q9BPX7 421 aa16.55■□□□□ 0.24
TPM1-207ENST00000403994 MKNK1Q9BUB5 465 aa16.55■□□□□ 0.24
TPM1-207ENST00000403994 TRMT61BQ9BVS5 477 aaKnown RBP16.55■□□□□ 0.24
TPM1-207ENST00000403994 BRD9Q9H8M2 597 aa16.55■□□□□ 0.24
TPM1-207ENST00000403994 ABI2Q9NYB9 513 aaPredicted RBP16.55■□□□□ 0.24
TPM1-207ENST00000403994 HSPBP1Q9NZL4 362 aa16.55■□□□□ 0.24
TPM1-207ENST00000403994 MTF2Q9Y483 593 aaPredicted RBP16.55■□□□□ 0.24
TPM1-207ENST00000403994 PTPRDP23468 1912 aa16.55■□□□□ 0.24
TPM1-207ENST00000403994 EP300Q09472 2414 aaPredicted RBP16.54■□□□□ 0.24
TPM1-207ENST00000403994 SHISA7A6NL88 538 aa16.54■□□□□ 0.24
TPM1-207ENST00000403994 PSMC3P17980 439 aa16.54■□□□□ 0.24
TPM1-207ENST00000403994 TARSP26639 723 aaKnown RBP16.54■□□□□ 0.24
TPM1-207ENST00000403994 DNM1Q05193 864 aaKnown RBP16.54■□□□□ 0.24
TPM1-207ENST00000403994 SMARCB1Q12824 385 aa16.54■□□□□ 0.24
TPM1-207ENST00000403994 VEPH1Q14D04 833 aa16.54■□□□□ 0.24
TPM1-207ENST00000403994 ATL3Q6DD88 541 aa16.54■□□□□ 0.24
TPM1-207ENST00000403994 UNC13DQ70J99 1090 aa16.54■□□□□ 0.24
TPM1-207ENST00000403994 DNAJB7Q7Z6W7 309 aaPredicted RBP16.54■□□□□ 0.24
TPM1-207ENST00000403994 ITIH5Q86UX2 942 aa16.54■□□□□ 0.24
TPM1-207ENST00000403994 CSGALNACT2Q8N6G5 542 aa16.54■□□□□ 0.24
TPM1-207ENST00000403994 SPPL2BQ8TCT7 592 aa16.54■□□□□ 0.24
TPM1-207ENST00000403994 RSPRY1Q96DX4 576 aa16.54■□□□□ 0.24
TPM1-207ENST00000403994 OSBPL6Q9BZF3 934 aa16.54■□□□□ 0.24
TPM1-207ENST00000403994 GPR88Q9GZN0 384 aa16.54■□□□□ 0.24
TPM1-207ENST00000403994 AGPAT3Q9NRZ7 376 aa16.54■□□□□ 0.24
TPM1-207ENST00000403994 TMLHEQ9NVH6 421 aa16.54■□□□□ 0.24
TPM1-207ENST00000403994 PTPRZ1P23471 2315 aaPredicted RBP16.54■□□□□ 0.24
TPM1-207ENST00000403994 DCHS1Q96JQ0 3298 aa16.53■□□□□ 0.24
TPM1-207ENST00000403994 FGF19O95750 216 aa16.53■□□□□ 0.24
TPM1-207ENST00000403994 KRT19P08727 400 aa16.53■□□□□ 0.24
TPM1-207ENST00000403994 GABRR2P28476 465 aa16.53■□□□□ 0.24
TPM1-207ENST00000403994 GDI1P31150 447 aa16.53■□□□□ 0.24
TPM1-207ENST00000403994 TUFMP49411 452 aaKnown RBP16.53■□□□□ 0.24
TPM1-207ENST00000403994 TSPY1Q01534 308 aa16.53■□□□□ 0.24
TPM1-207ENST00000403994 C1orf210Q8IVY1 113 aa16.53■□□□□ 0.24
TPM1-207ENST00000403994 DCP1BQ8IZD4 617 aaKnown RBP16.53■□□□□ 0.24
TPM1-207ENST00000403994 TMEM86AQ8N2M4 240 aa16.53■□□□□ 0.24
TPM1-207ENST00000403994 OR5B17Q8NGF7 314 aa16.53■□□□□ 0.24
TPM1-207ENST00000403994 FAM200AQ8TCP9 573 aa16.53■□□□□ 0.24
TPM1-207ENST00000403994 LEO1Q8WVC0 666 aaPredicted RBP16.53■□□□□ 0.24
TPM1-207ENST00000403994 IRF7Q92985 503 aa16.53■□□□□ 0.24
TPM1-207ENST00000403994 NKD2Q969F2 451 aaPredicted RBP16.53■□□□□ 0.24
TPM1-207ENST00000403994 ANKRD36BP1Q96IX9 119 aa16.53■□□□□ 0.24
TPM1-207ENST00000403994 BLZF1Q9H2G9 400 aa16.53■□□□□ 0.24
TPM1-207ENST00000403994 INTS13Q9NVM9 706 aa16.53■□□□□ 0.24
TPM1-207ENST00000403994 GDAP2Q9NXN4 497 aa16.53■□□□□ 0.24
TPM1-207ENST00000403994 FAM13BQ9NYF5 915 aa16.53■□□□□ 0.24
TPM1-207ENST00000403994 OTOGLQ3ZCN5 2332 aa16.53■□□□□ 0.24
TPM1-207ENST00000403994 ZNF638Q14966 1978 aaKnown RBP16.52■□□□□ 0.24
TPM1-207ENST00000403994 ZNF233A6NK53 670 aa16.52■□□□□ 0.24
TPM1-207ENST00000403994 FAM170BA6NMN3 283 aa16.52■□□□□ 0.24
TPM1-207ENST00000403994 HEPACAM2A8MVW5 462 aa16.52■□□□□ 0.24
TPM1-207ENST00000403994 ARNTLO00327 626 aa16.52■□□□□ 0.24
TPM1-207ENST00000403994 TGFB1I1O43294 461 aa16.52■□□□□ 0.24
TPM1-207ENST00000403994 HUS1O60921 280 aa16.52■□□□□ 0.24
TPM1-207ENST00000403994 PRAMEF12O95522 483 aa16.52■□□□□ 0.24
TPM1-207ENST00000403994 HAPLN1P10915 354 aaPredicted RBP16.52■□□□□ 0.24
TPM1-207ENST00000403994 RBP5P82980 135 aa16.52■□□□□ 0.24
TPM1-207ENST00000403994 CYP4F8P98187 520 aa16.52■□□□□ 0.24
TPM1-207ENST00000403994 SNRNP35Q16560 246 aaKnown RBP16.52■□□□□ 0.24
TPM1-207ENST00000403994 CCDC142Q17RM4 750 aa16.52■□□□□ 0.24
TPM1-207ENST00000403994 ZNF852Q6ZMS4 543 aa16.52■□□□□ 0.24
TPM1-207ENST00000403994 OSTM1Q86WC4 334 aa16.52■□□□□ 0.24
TPM1-207ENST00000403994 MFSD6LQ8IWD5 586 aa16.52■□□□□ 0.24
TPM1-207ENST00000403994 NELFCDQ8IXH7 590 aa16.52■□□□□ 0.24
TPM1-207ENST00000403994 GRAMD1CQ8IYS0 662 aa16.52■□□□□ 0.24
TPM1-207ENST00000403994 ADGRF2Q8IZF7 708 aa16.52■□□□□ 0.24
TPM1-207ENST00000403994 TOP6BLQ8N6T0 577 aa16.52■□□□□ 0.24
TPM1-207ENST00000403994 ZNF507Q8TCN5 953 aa16.52■□□□□ 0.24
TPM1-207ENST00000403994 SCFD1Q8WVM8 642 aa16.52■□□□□ 0.24
TPM1-207ENST00000403994 PKMYT1Q99640 499 aa16.52■□□□□ 0.24
TPM1-207ENST00000403994 BCO2Q9BYV7 579 aa16.52■□□□□ 0.24
TPM1-207ENST00000403994 ATXN3LQ9H3M9 355 aa16.52■□□□□ 0.24
TPM1-207ENST00000403994 IL21Q9HBE4 155 aa16.52■□□□□ 0.24
TPM1-207ENST00000403994 DDX43Q9NXZ2 648 aaKnown RBP16.52■□□□□ 0.24
TPM1-207ENST00000403994 CFAP45Q9UL16 551 aa16.52■□□□□ 0.24
TPM1-207ENST00000403994 PCDHB5Q9Y5E4 795 aa16.52■□□□□ 0.24
TPM1-207ENST00000403994 SNX9Q9Y5X1 595 aa16.52■□□□□ 0.24
TPM1-207ENST00000403994 GREB1Q4ZG55 1949 aa16.51■□□□□ 0.23
TPM1-207ENST00000403994 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.51■□□□□ 0.23
TPM1-207ENST00000403994 HCRTO43612 131 aa16.51■□□□□ 0.23
TPM1-207ENST00000403994 ACTN4O43707 911 aaKnown RBP16.51■□□□□ 0.23
TPM1-207ENST00000403994 TNNC2P02585 160 aa16.51■□□□□ 0.23
TPM1-207ENST00000403994 ACAT1P24752 427 aaKnown RBP16.51■□□□□ 0.23
TPM1-207ENST00000403994 CDC25CP30307 473 aa16.51■□□□□ 0.23
TPM1-207ENST00000403994 MAGEA9P43362 315 aa16.51■□□□□ 0.23
TPM1-207ENST00000403994 AFMP43652 599 aa16.51■□□□□ 0.23
TPM1-207ENST00000403994 CYP2J2P51589 502 aa16.51■□□□□ 0.23
TPM1-207ENST00000403994 FCHO2Q0JRZ9 810 aa16.51■□□□□ 0.23
TPM1-207ENST00000403994 CUL4BQ13620 913 aa16.51■□□□□ 0.23
TPM1-207ENST00000403994 SURF1Q15526 300 aa16.51■□□□□ 0.23
TPM1-207ENST00000403994 BMT2Q1RMZ1 405 aa16.51■□□□□ 0.23
TPM1-207ENST00000403994 ARHGAP15Q53QZ3 475 aa16.51■□□□□ 0.23
TPM1-207ENST00000403994 INTS6LQ5JSJ4 861 aaKnown RBP16.51■□□□□ 0.23
TPM1-207ENST00000403994 GPR158Q5T848 1215 aa16.51■□□□□ 0.23
TPM1-207ENST00000403994 WDR49Q8IV35 697 aa16.51■□□□□ 0.23
TPM1-207ENST00000403994 ARID3BQ8IVW6 561 aaPredicted RBP16.51■□□□□ 0.23
TPM1-207ENST00000403994 MAML2Q8IZL2 1156 aaPredicted RBP16.51■□□□□ 0.23
TPM1-207ENST00000403994 SPATA18Q8TC71 538 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms