RNA–Protein interactions for RNA: ENST00000403537.3

THUMPD2-202, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 961 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-202ENST00000403537 THEM5Q8N1Q8 247 aa19.22■□□□□ 0.67
THUMPD2-202ENST00000403537 SLC44A3Q8N4M1 653 aa19.22■□□□□ 0.67
THUMPD2-202ENST00000403537 FGF13Q92913 245 aa19.22■□□□□ 0.67
THUMPD2-202ENST00000403537 FNBP1Q96RU3 617 aa19.22■□□□□ 0.67
THUMPD2-202ENST00000403537 SRRTQ9BXP5 876 aaKnown RBP19.22■□□□□ 0.67
THUMPD2-202ENST00000403537 IRF2BPLQ9H1B7 796 aa19.22■□□□□ 0.67
THUMPD2-202ENST00000403537 DNMT3BQ9UBC3 853 aaKnown RBP19.22■□□□□ 0.67
THUMPD2-202ENST00000403537 HSFX1Q9UBD0 423 aa19.22■□□□□ 0.67
THUMPD2-202ENST00000403537 WNT16Q9UBV4 365 aa19.22■□□□□ 0.67
THUMPD2-202ENST00000403537 R3HCC1Q9Y3T6 440 aaKnown RBP19.22■□□□□ 0.67
THUMPD2-202ENST00000403537 TSC2P49815 1807 aa19.22■□□□□ 0.67
THUMPD2-202ENST00000403537 TRIOO75962 3097 aa19.21■□□□□ 0.67
THUMPD2-202ENST00000403537 MAPK13O15264 365 aa19.21■□□□□ 0.67
THUMPD2-202ENST00000403537 SLC16A3O15427 465 aaKnown RBP19.21■□□□□ 0.67
THUMPD2-202ENST00000403537 RHOP08100 348 aa19.21■□□□□ 0.67
THUMPD2-202ENST00000403537 EPB41P11171 864 aaKnown RBP19.21■□□□□ 0.67
THUMPD2-202ENST00000403537 POLR2BP30876 1174 aaKnown RBP19.21■□□□□ 0.67
THUMPD2-202ENST00000403537 VAMP7P51809 220 aa19.21■□□□□ 0.67
THUMPD2-202ENST00000403537 NTHL1P78549 312 aa19.21■□□□□ 0.67
THUMPD2-202ENST00000403537 SMARCB1Q12824 385 aa19.21■□□□□ 0.67
THUMPD2-202ENST00000403537 BFSP1Q12934 665 aa19.21■□□□□ 0.67
THUMPD2-202ENST00000403537 HTR4Q13639 388 aa19.21■□□□□ 0.67
THUMPD2-202ENST00000403537 CYP4A22Q5TCH4 519 aa19.21■□□□□ 0.67
THUMPD2-202ENST00000403537 FOXR2Q6PJQ5 311 aa19.21■□□□□ 0.67
THUMPD2-202ENST00000403537 TMC2Q8TDI7 906 aa19.21■□□□□ 0.67
THUMPD2-202ENST00000403537 ELMO3Q96BJ8 720 aa19.21■□□□□ 0.67
THUMPD2-202ENST00000403537 ZNF512Q96ME7 567 aaPredicted RBP19.21■□□□□ 0.67
THUMPD2-202ENST00000403537 MKNK1Q9BUB5 465 aa19.21■□□□□ 0.67
THUMPD2-202ENST00000403537 MMRN2Q9H8L6 949 aa19.21■□□□□ 0.67
THUMPD2-202ENST00000403537 ANO10Q9NW15 660 aa19.21■□□□□ 0.67
THUMPD2-202ENST00000403537 ITGA11Q9UKX5 1188 aa19.21■□□□□ 0.67
THUMPD2-202ENST00000403537 TIMM13Q9Y5L4 95 aaPredicted RBP19.21■□□□□ 0.67
THUMPD2-202ENST00000403537 ZDBF2Q9HCK1 2354 aa19.2■□□□□ 0.66
THUMPD2-202ENST00000403537 CYB561D2O14569 222 aa19.2■□□□□ 0.66
THUMPD2-202ENST00000403537 SEC24AO95486 1093 aa19.2■□□□□ 0.66
THUMPD2-202ENST00000403537 ERCC5P28715 1186 aaPredicted RBP19.2■□□□□ 0.66
THUMPD2-202ENST00000403537 AVPR2P30518 371 aa19.2■□□□□ 0.66
THUMPD2-202ENST00000403537 CLCN5P51795 746 aa19.2■□□□□ 0.66
THUMPD2-202ENST00000403537 CLDN10P78369 228 aa19.2■□□□□ 0.66
THUMPD2-202ENST00000403537 PPP3CAQ08209 521 aa19.2■□□□□ 0.66
THUMPD2-202ENST00000403537 ANO6Q4KMQ2 910 aa19.2■□□□□ 0.66
THUMPD2-202ENST00000403537 HSP90AA4PQ58FG1 418 aa19.2■□□□□ 0.66
THUMPD2-202ENST00000403537 TDRD10Q5VZ19 366 aaKnown RBP19.2■□□□□ 0.66
THUMPD2-202ENST00000403537 INTS8Q75QN2 995 aaKnown RBP19.2■□□□□ 0.66
THUMPD2-202ENST00000403537 IRF2BP1Q8IU81 584 aa19.2■□□□□ 0.66
THUMPD2-202ENST00000403537 LRRC52Q8N7C0 313 aa19.2■□□□□ 0.66
THUMPD2-202ENST00000403537 ANKRD36BP1Q96IX9 119 aa19.2■□□□□ 0.66
THUMPD2-202ENST00000403537 CEP63Q96MT8 703 aa19.2■□□□□ 0.66
THUMPD2-202ENST00000403537 DACH1Q9UI36 760 aa19.2■□□□□ 0.66
THUMPD2-202ENST00000403537 AGAP1Q9UPQ3 857 aa19.2■□□□□ 0.66
THUMPD2-202ENST00000403537 MUC6Q6W4X9 2439 aa19.2■□□□□ 0.66
THUMPD2-202ENST00000403537 KPNA7A9QM74 516 aa19.19■□□□□ 0.66
THUMPD2-202ENST00000403537 TNNC2P02585 160 aa19.19■□□□□ 0.66
THUMPD2-202ENST00000403537 KRT19P08727 400 aa19.19■□□□□ 0.66
THUMPD2-202ENST00000403537 KRT13P13646 458 aa19.19■□□□□ 0.66
THUMPD2-202ENST00000403537 GCLMP48507 274 aa19.19■□□□□ 0.66
THUMPD2-202ENST00000403537 PTPN5P54829 565 aa19.19■□□□□ 0.66
THUMPD2-202ENST00000403537 DUOXA2Q1HG44 320 aa19.19■□□□□ 0.66
THUMPD2-202ENST00000403537 CCDC40Q4G0X9 1142 aa19.19■□□□□ 0.66
THUMPD2-202ENST00000403537 DCAF17Q5H9S7 520 aaPredicted RBP19.19■□□□□ 0.66
THUMPD2-202ENST00000403537 RNF19BQ6ZMZ0 732 aa19.19■□□□□ 0.66
THUMPD2-202ENST00000403537 PDZD4Q76G19 769 aaPredicted RBP19.19■□□□□ 0.66
THUMPD2-202ENST00000403537 TRAPPC11Q7Z392 1133 aa19.19■□□□□ 0.66
THUMPD2-202ENST00000403537 FILIP1Q7Z7B0 1213 aa19.19■□□□□ 0.66
THUMPD2-202ENST00000403537 NPAS3Q8IXF0 933 aa19.19■□□□□ 0.66
THUMPD2-202ENST00000403537 ITFG1Q8TB96 612 aa19.19■□□□□ 0.66
THUMPD2-202ENST00000403537 C2orf15Q8WU43 125 aaKnown RBP19.19■□□□□ 0.66
THUMPD2-202ENST00000403537 CORO1BQ9BR76 489 aa19.19■□□□□ 0.66
THUMPD2-202ENST00000403537 SLC2A4RGQ9NR83 387 aa19.19■□□□□ 0.66
THUMPD2-202ENST00000403537 HCFC1R1Q9NWW0 138 aa19.19■□□□□ 0.66
THUMPD2-202ENST00000403537 ASB3Q9Y575 518 aa19.19■□□□□ 0.66
THUMPD2-202ENST00000403537 NUMBLQ9Y6R0 609 aa19.19■□□□□ 0.66
THUMPD2-202ENST00000403537 MYO10Q9HD67 2058 aa19.19■□□□□ 0.66
THUMPD2-202ENST00000403537 VNN1O95497 513 aa19.18■□□□□ 0.66
THUMPD2-202ENST00000403537 C4BPAP04003 597 aaKnown RBP19.18■□□□□ 0.66
THUMPD2-202ENST00000403537 ALDH1A3P47895 512 aa19.18■□□□□ 0.66
THUMPD2-202ENST00000403537 TUFMP49411 452 aaKnown RBP19.18■□□□□ 0.66
THUMPD2-202ENST00000403537 EPHB3P54753 998 aa19.18■□□□□ 0.66
THUMPD2-202ENST00000403537 RBP5P82980 135 aa19.18■□□□□ 0.66
THUMPD2-202ENST00000403537 TWF1Q12792 350 aa19.18■□□□□ 0.66
THUMPD2-202ENST00000403537 ASTLQ6HA08 431 aaPredicted RBP19.18■□□□□ 0.66
THUMPD2-202ENST00000403537 SPATA18Q8TC71 538 aa19.18■□□□□ 0.66
THUMPD2-202ENST00000403537 RSAD2Q8WXG1 361 aa19.18■□□□□ 0.66
THUMPD2-202ENST00000403537 SMOC2Q9H3U7 446 aa19.18■□□□□ 0.66
THUMPD2-202ENST00000403537 ASAH2Q9NR71 780 aa19.18■□□□□ 0.66
THUMPD2-202ENST00000403537 SAMSN1Q9NSI8 373 aaKnown RBP19.18■□□□□ 0.66
THUMPD2-202ENST00000403537 ARMCX3Q9UH62 379 aaPredicted RBP19.18■□□□□ 0.66
THUMPD2-202ENST00000403537 YIPF1Q9Y548 306 aa19.18■□□□□ 0.66
THUMPD2-202ENST00000403537 ZNF318Q5VUA4 2279 aa19.17■□□□□ 0.66
THUMPD2-202ENST00000403537 LRRN2O75325 713 aa19.17■□□□□ 0.66
THUMPD2-202ENST00000403537 FGF19O95750 216 aa19.17■□□□□ 0.66
THUMPD2-202ENST00000403537 CST3P01034 146 aaPredicted RBP19.17■□□□□ 0.66
THUMPD2-202ENST00000403537 RFX1P22670 979 aa19.17■□□□□ 0.66
THUMPD2-202ENST00000403537 MYO1EQ12965 1108 aa19.17■□□□□ 0.66
THUMPD2-202ENST00000403537 BIRC3Q13489 604 aa19.17■□□□□ 0.66
THUMPD2-202ENST00000403537 TCERG1LQ5VWI1 586 aa19.17■□□□□ 0.66
THUMPD2-202ENST00000403537 SV2AQ7L0J3 742 aa19.17■□□□□ 0.66
THUMPD2-202ENST00000403537 DCP1BQ8IZD4 617 aaKnown RBP19.17■□□□□ 0.66
THUMPD2-202ENST00000403537 TMEM86AQ8N2M4 240 aa19.17■□□□□ 0.66
THUMPD2-202ENST00000403537 SLC35C1Q96A29 364 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms