RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 EIF5BO60841 1220 aaKnown RBP12.9□□□□□ -0.34
LINC00544-201ENST00000400540 FAM13AO94988 1023 aa12.9□□□□□ -0.34
LINC00544-201ENST00000400540 CYP11A1P05108 521 aa12.9□□□□□ -0.34
LINC00544-201ENST00000400540 KCNA4P22459 653 aa12.9□□□□□ -0.34
LINC00544-201ENST00000400540 MCM6Q14566 821 aa12.9□□□□□ -0.34
LINC00544-201ENST00000400540 KYAT1Q16773 422 aa12.9□□□□□ -0.34
LINC00544-201ENST00000400540 ZC2HC1CQ53FD0 456 aaPredicted RBP12.9□□□□□ -0.34
LINC00544-201ENST00000400540 TRIM68Q6AZZ1 485 aa12.9□□□□□ -0.34
LINC00544-201ENST00000400540 CEP68Q76N32 757 aa12.9□□□□□ -0.34
LINC00544-201ENST00000400540 LRRTM3Q86VH5 581 aa12.9□□□□□ -0.34
LINC00544-201ENST00000400540 WDR5BQ86VZ2 330 aa12.9□□□□□ -0.34
LINC00544-201ENST00000400540 KCTD17Q8N5Z5 321 aa12.9□□□□□ -0.34
LINC00544-201ENST00000400540 RIN3Q8TB24 985 aa12.9□□□□□ -0.34
LINC00544-201ENST00000400540 PYM1Q9BRP8 204 aaKnown RBP12.9□□□□□ -0.34
LINC00544-201ENST00000400540 SLC46A2Q9BY10 475 aa12.9□□□□□ -0.34
LINC00544-201ENST00000400540 ZHX3Q9H4I2 956 aa12.9□□□□□ -0.34
LINC00544-201ENST00000400540 PARVGQ9HBI0 331 aa12.9□□□□□ -0.34
LINC00544-201ENST00000400540 HPS4Q9NQG7 708 aa12.9□□□□□ -0.34
LINC00544-201ENST00000400540 POLR3BQ9NW08 1133 aaPredicted RBP12.9□□□□□ -0.34
LINC00544-201ENST00000400540 CCL26Q9Y258 94 aa12.9□□□□□ -0.34
LINC00544-201ENST00000400540 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.9□□□□□ -0.34
LINC00544-201ENST00000400540 OTOL1A6NHN0 477 aaPredicted RBP12.89□□□□□ -0.35
LINC00544-201ENST00000400540 CYB561D2O14569 222 aa12.89□□□□□ -0.35
LINC00544-201ENST00000400540 TRAK2O60296 914 aa12.89□□□□□ -0.35
LINC00544-201ENST00000400540 FGF19O95750 216 aa12.89□□□□□ -0.35
LINC00544-201ENST00000400540 PLCG1P19174 1290 aa12.89□□□□□ -0.35
LINC00544-201ENST00000400540 WEE1P30291 646 aa12.89□□□□□ -0.35
LINC00544-201ENST00000400540 CDC25CP30307 473 aa12.89□□□□□ -0.35
LINC00544-201ENST00000400540 CNR2P34972 360 aa12.89□□□□□ -0.35
LINC00544-201ENST00000400540 GPR15P49685 360 aa12.89□□□□□ -0.35
LINC00544-201ENST00000400540 MCM2P49736 904 aa12.89□□□□□ -0.35
LINC00544-201ENST00000400540 MAPK8IP2Q13387 824 aaPredicted RBP12.89□□□□□ -0.35
LINC00544-201ENST00000400540 VEPH1Q14D04 833 aa12.89□□□□□ -0.35
LINC00544-201ENST00000400540 KARSQ15046 597 aaKnown RBP12.89□□□□□ -0.35
LINC00544-201ENST00000400540 SF3A2Q15428 464 aaKnown RBP12.89□□□□□ -0.35
LINC00544-201ENST00000400540 ITPRIPL2Q3MIP1 535 aa12.89□□□□□ -0.35
LINC00544-201ENST00000400540 WSCD1Q658N2 575 aa12.89□□□□□ -0.35
LINC00544-201ENST00000400540 ARL6IP4Q66PJ3 421 aaKnown RBP12.89□□□□□ -0.35
LINC00544-201ENST00000400540 FSTL4Q6MZW2 842 aa12.89□□□□□ -0.35
LINC00544-201ENST00000400540 TMEM150AQ86TG1 271 aa12.89□□□□□ -0.35
LINC00544-201ENST00000400540 CD302Q8IX05 232 aa12.89□□□□□ -0.35
LINC00544-201ENST00000400540 EFCAB13Q8IY85 973 aa12.89□□□□□ -0.35
LINC00544-201ENST00000400540 GCNAQ96QF7 691 aa12.89□□□□□ -0.35
LINC00544-201ENST00000400540 RXFP3Q9NSD7 469 aa12.89□□□□□ -0.35
LINC00544-201ENST00000400540 TMLHEQ9NVH6 421 aa12.89□□□□□ -0.35
LINC00544-201ENST00000400540 ABI2Q9NYB9 513 aaPredicted RBP12.89□□□□□ -0.35
LINC00544-201ENST00000400540 HSFX1Q9UBD0 423 aa12.89□□□□□ -0.35
LINC00544-201ENST00000400540 AXIN1O15169 862 aa12.88□□□□□ -0.35
LINC00544-201ENST00000400540 CD2BP2O95400 341 aaKnown RBP12.88□□□□□ -0.35
LINC00544-201ENST00000400540 KRT18P05783 430 aaKnown RBP12.88□□□□□ -0.35
LINC00544-201ENST00000400540 HAPLN1P10915 354 aaPredicted RBP12.88□□□□□ -0.35
LINC00544-201ENST00000400540 GJB2P29033 226 aa12.88□□□□□ -0.35
LINC00544-201ENST00000400540 TUFMP49411 452 aaKnown RBP12.88□□□□□ -0.35
LINC00544-201ENST00000400540 TAF6P49848 677 aa12.88□□□□□ -0.35
LINC00544-201ENST00000400540 WNT7BP56706 349 aa12.88□□□□□ -0.35
LINC00544-201ENST00000400540 GTF2BQ00403 316 aa12.88□□□□□ -0.35
LINC00544-201ENST00000400540 PLCB2Q00722 1185 aa12.88□□□□□ -0.35
LINC00544-201ENST00000400540 SDHAF4Q5VUM1 108 aa12.88□□□□□ -0.35
LINC00544-201ENST00000400540 NAIF1Q69YI7 327 aaPredicted RBP12.88□□□□□ -0.35
LINC00544-201ENST00000400540 ADALQ6DHV7 355 aa12.88□□□□□ -0.35
LINC00544-201ENST00000400540 MAB21L3Q8N8X9 362 aa12.88□□□□□ -0.35
LINC00544-201ENST00000400540 RAD54LQ92698 747 aa12.88□□□□□ -0.35
LINC00544-201ENST00000400540 CALML4Q96GE6 196 aa12.88□□□□□ -0.35
LINC00544-201ENST00000400540 FAM84AQ96KN4 292 aa12.88□□□□□ -0.35
LINC00544-201ENST00000400540 TSPAN18Q96SJ8 248 aa12.88□□□□□ -0.35
LINC00544-201ENST00000400540 FAM83CQ9BQN1 747 aa12.88□□□□□ -0.35
LINC00544-201ENST00000400540 ARRDC1-AS1Q9H2J1 176 aa12.88□□□□□ -0.35
LINC00544-201ENST00000400540 SMOC1Q9H4F8 434 aa12.88□□□□□ -0.35
LINC00544-201ENST00000400540 EBF3Q9H4W6 596 aa12.88□□□□□ -0.35
LINC00544-201ENST00000400540 GKN1Q9NS71 199 aa12.88□□□□□ -0.35
LINC00544-201ENST00000400540 DPP3Q9NY33 737 aa12.88□□□□□ -0.35
LINC00544-201ENST00000400540 DERAQ9Y315 318 aa12.88□□□□□ -0.35
LINC00544-201ENST00000400540 TNRC6BQ9UPQ9 1833 aaKnown RBP12.88□□□□□ -0.35
LINC00544-201ENST00000400540 THADAQ6YHU6 1953 aa12.87□□□□□ -0.35
LINC00544-201ENST00000400540 H3BQV1 296 aa12.87□□□□□ -0.35
LINC00544-201ENST00000400540 TBCAO75347 108 aaKnown RBP12.87□□□□□ -0.35
LINC00544-201ENST00000400540 EGFP01133 1207 aa12.87□□□□□ -0.35
LINC00544-201ENST00000400540 F11P03951 625 aa12.87□□□□□ -0.35
LINC00544-201ENST00000400540 ARSAP15289 507 aa12.87□□□□□ -0.35
LINC00544-201ENST00000400540 HMGA1P17096 107 aaKnown RBP12.87□□□□□ -0.35
LINC00544-201ENST00000400540 HOXA6P31267 233 aa12.87□□□□□ -0.35
LINC00544-201ENST00000400540 UBA7P41226 1012 aa12.87□□□□□ -0.35
LINC00544-201ENST00000400540 NLRP12P59046 1061 aa12.87□□□□□ -0.35
LINC00544-201ENST00000400540 RUNX3Q13761 415 aa12.87□□□□□ -0.35
LINC00544-201ENST00000400540 TAF12Q16514 161 aa12.87□□□□□ -0.35
LINC00544-201ENST00000400540 CCDC142Q17RM4 750 aa12.87□□□□□ -0.35
LINC00544-201ENST00000400540 C8orf34Q49A92 452 aa12.87□□□□□ -0.35
LINC00544-201ENST00000400540 AASDHQ4L235 1098 aaPredicted RBP12.87□□□□□ -0.35
LINC00544-201ENST00000400540 TMEM196Q5HYL7 178 aa12.87□□□□□ -0.35
LINC00544-201ENST00000400540 TXNDC8Q6A555 127 aa12.87□□□□□ -0.35
LINC00544-201ENST00000400540 SCARA3Q6AZY7 606 aa12.87□□□□□ -0.35
LINC00544-201ENST00000400540 CRELD2Q6UXH1 353 aaPredicted RBP12.87□□□□□ -0.35
LINC00544-201ENST00000400540 KBTBD6Q86V97 674 aa12.87□□□□□ -0.35
LINC00544-201ENST00000400540 METTL23Q86XA0 190 aa12.87□□□□□ -0.35
LINC00544-201ENST00000400540 CMTM8Q8IZV2 173 aa12.87□□□□□ -0.35
LINC00544-201ENST00000400540 SYNPOQ8N3V7 929 aa12.87□□□□□ -0.35
LINC00544-201ENST00000400540 ZSWIM2Q8NEG5 633 aa12.87□□□□□ -0.35
LINC00544-201ENST00000400540 SPPL2BQ8TCT7 592 aa12.87□□□□□ -0.35
LINC00544-201ENST00000400540 GAB3Q8WWW8 586 aa12.87□□□□□ -0.35
LINC00544-201ENST00000400540 USP13Q92995 863 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms