RNA–Protein interactions for RNA: ENST00000399644.5

CACNA1C-218, Transcript of calcium voltage-gated channel subunit alpha1 C, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-218	ENST00000399644	CYFIP1	Q7L576	1253 aa		11.6	□□□□□ -0.55
CACNA1C-218	ENST00000399644	PRKAB1	Q9Y478	270 aa		11.6	□□□□□ -0.55
CACNA1C-218	ENST00000399644	NCF1B	A6NI72	391 aa	Predicted RBP	11.6	□□□□□ -0.55
CACNA1C-218	ENST00000399644	NCF1C	A8MVU1	366 aa	Predicted RBP	11.6	□□□□□ -0.55
CACNA1C-218	ENST00000399644	PRMT3	O60678	531 aa		11.6	□□□□□ -0.55
CACNA1C-218	ENST00000399644	GGPS1	O95749	300 aa		11.6	□□□□□ -0.55
CACNA1C-218	ENST00000399644	NCF1	P14598	390 aa	Predicted RBP	11.6	□□□□□ -0.55
CACNA1C-218	ENST00000399644	WEE1	P30291	646 aa		11.6	□□□□□ -0.55
CACNA1C-218	ENST00000399644	MXI1	P50539	228 aa		11.6	□□□□□ -0.55
CACNA1C-218	ENST00000399644	ITGAD	Q13349	1161 aa		11.6	□□□□□ -0.55
CACNA1C-218	ENST00000399644	TKFC	Q3LXA3	575 aa		11.6	□□□□□ -0.55
CACNA1C-218	ENST00000399644	ARSJ	Q5FYB0	599 aa	Predicted RBP	11.6	□□□□□ -0.55
CACNA1C-218	ENST00000399644	SLC38A7	Q9NVC3	462 aa		11.6	□□□□□ -0.55
CACNA1C-218	ENST00000399644	LAD1	O00515	517 aa		11.6	□□□□□ -0.55
CACNA1C-218	ENST00000399644	CKB	P12277	381 aa		11.6	□□□□□ -0.55
CACNA1C-218	ENST00000399644	LBP	P18428	481 aa		11.6	□□□□□ -0.55
CACNA1C-218	ENST00000399644	ETFB	P38117	255 aa		11.6	□□□□□ -0.55
CACNA1C-218	ENST00000399644	P3H2	Q8IVL5	708 aa		11.6	□□□□□ -0.55
CACNA1C-218	ENST00000399644	CCDC185	Q8N715	623 aa		11.6	□□□□□ -0.55
CACNA1C-218	ENST00000399644	DDI1	Q8WTU0	396 aa		11.6	□□□□□ -0.55
CACNA1C-218	ENST00000399644	PIGK	Q92643	395 aa		11.6	□□□□□ -0.55
CACNA1C-218	ENST00000399644	MBD2	Q9UBB5	411 aa		11.6	□□□□□ -0.55
CACNA1C-218	ENST00000399644	CFAP99	D6REC4	459 aa		11.6	□□□□□ -0.55
CACNA1C-218	ENST00000399644	ZNF500	O60304	480 aa	Predicted RBP	11.6	□□□□□ -0.55
CACNA1C-218	ENST00000399644	SRP72	O76094	671 aa	Known RBP	11.6	□□□□□ -0.55
CACNA1C-218	ENST00000399644	CDK17	Q00537	523 aa		11.6	□□□□□ -0.55
CACNA1C-218	ENST00000399644	MMRN1	Q13201	1228 aa		11.6	□□□□□ -0.55
CACNA1C-218	ENST00000399644	ATP1A4	Q13733	1029 aa		11.6	□□□□□ -0.55
CACNA1C-218	ENST00000399644	TDRD10	Q5VZ19	366 aa	Known RBP	11.6	□□□□□ -0.55
CACNA1C-218	ENST00000399644	IL17RE	Q8NFR9	667 aa		11.6	□□□□□ -0.55
CACNA1C-218	ENST00000399644	FAM45A	Q8TCE6	357 aa		11.6	□□□□□ -0.55
CACNA1C-218	ENST00000399644	FANCE	Q9HB96	536 aa		11.6	□□□□□ -0.55
CACNA1C-218	ENST00000399644	ZNF70	Q9UC06	446 aa	Predicted RBP	11.6	□□□□□ -0.55
CACNA1C-218	ENST00000399644	DBR1	Q9UK59	544 aa	Known RBP	11.6	□□□□□ -0.55
CACNA1C-218	ENST00000399644	CYP2D7	A0A087X1C5	515 aa		11.6	□□□□□ -0.55
CACNA1C-218	ENST00000399644	RGL2	O15211	777 aa		11.6	□□□□□ -0.55
CACNA1C-218	ENST00000399644	PRKAB2	O43741	272 aa		11.6	□□□□□ -0.55
CACNA1C-218	ENST00000399644	FGA	P02671	866 aa		11.6	□□□□□ -0.55
CACNA1C-218	ENST00000399644	AVPR1A	P37288	418 aa		11.6	□□□□□ -0.55
CACNA1C-218	ENST00000399644	TGFB2	P61812	414 aa		11.6	□□□□□ -0.55
CACNA1C-218	ENST00000399644	TMEM132D	Q14C87	1099 aa		11.6	□□□□□ -0.55
CACNA1C-218	ENST00000399644	STYK1	Q6J9G0	422 aa		11.6	□□□□□ -0.55
CACNA1C-218	ENST00000399644	S100A13	Q99584	98 aa		11.6	□□□□□ -0.55
CACNA1C-218	ENST00000399644	MIR1-1HG	Q9H1L0	117 aa		11.6	□□□□□ -0.55
CACNA1C-218	ENST00000399644	DEFB129	Q9H1M3	183 aa		11.6	□□□□□ -0.55
CACNA1C-218	ENST00000399644	CCDC162P	A2VCL2	907 aa		11.6	□□□□□ -0.55
CACNA1C-218	ENST00000399644	LRRC14B	A6NHZ5	514 aa		11.6	□□□□□ -0.55
CACNA1C-218	ENST00000399644	AIM2	O14862	343 aa		11.6	□□□□□ -0.55
CACNA1C-218	ENST00000399644	SGSM2	O43147	1006 aa		11.6	□□□□□ -0.55
CACNA1C-218	ENST00000399644	LCA5L	O95447	670 aa		11.6	□□□□□ -0.55
CACNA1C-218	ENST00000399644	MSL3P1	P0C860	447 aa		11.6	□□□□□ -0.55
CACNA1C-218	ENST00000399644	VSNL1	P62760	191 aa		11.6	□□□□□ -0.55
CACNA1C-218	ENST00000399644	EFHC2	Q5JST6	749 aa		11.6	□□□□□ -0.55
CACNA1C-218	ENST00000399644	SARM1	Q6SZW1	724 aa		11.6	□□□□□ -0.55
CACNA1C-218	ENST00000399644	LONP2	Q86WA8	852 aa		11.6	□□□□□ -0.55
CACNA1C-218	ENST00000399644	PIGO	Q8TEQ8	1089 aa		11.6	□□□□□ -0.55
CACNA1C-218	ENST00000399644	TEX13B	Q9BXU2	312 aa		11.6	□□□□□ -0.55
CACNA1C-218	ENST00000399644	RAD21L1	Q9H4I0	556 aa		11.6	□□□□□ -0.55
CACNA1C-218	ENST00000399644	INSR	P06213	1382 aa		11.59	□□□□□ -0.55
CACNA1C-218	ENST00000399644	BTN3A3	O00478	584 aa		11.59	□□□□□ -0.55
CACNA1C-218	ENST00000399644	CHL1	O00533	1208 aa		11.59	□□□□□ -0.55
CACNA1C-218	ENST00000399644	TIMM44	O43615	452 aa		11.59	□□□□□ -0.55
CACNA1C-218	ENST00000399644	MFAP3L	O75121	409 aa		11.59	□□□□□ -0.55
CACNA1C-218	ENST00000399644	TNNI3	P19429	210 aa		11.59	□□□□□ -0.55
CACNA1C-218	ENST00000399644	ARMCX4	Q5H9R4	360 aa		11.59	□□□□□ -0.55
CACNA1C-218	ENST00000399644	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	11.59	□□□□□ -0.55
CACNA1C-218	ENST00000399644	ZNF438	Q7Z4V0	828 aa		11.59	□□□□□ -0.55
CACNA1C-218	ENST00000399644	RNF149	Q8NC42	400 aa		11.59	□□□□□ -0.55
CACNA1C-218	ENST00000399644	RNFT2	Q96EX2	444 aa		11.59	□□□□□ -0.55
CACNA1C-218	ENST00000399644	MRPL40	Q9NQ50	206 aa	Known RBP	11.59	□□□□□ -0.55
CACNA1C-218	ENST00000399644	SNX8	Q9Y5X2	465 aa		11.59	□□□□□ -0.55
CACNA1C-218	ENST00000399644	SYNGAP1	Q96PV0	1343 aa		11.59	□□□□□ -0.55
CACNA1C-218	ENST00000399644	PNMA6E	A0A0J9YXQ4	647 aa		11.59	□□□□□ -0.55
CACNA1C-218	ENST00000399644	GPR182	O15218	404 aa		11.59	□□□□□ -0.55
CACNA1C-218	ENST00000399644	CPSF4	O95639	269 aa	Known RBP	11.59	□□□□□ -0.55
CACNA1C-218	ENST00000399644	ALOX15	P16050	662 aa	Predicted RBP	11.59	□□□□□ -0.55
CACNA1C-218	ENST00000399644	ARFIP2	P53365	341 aa		11.59	□□□□□ -0.55
CACNA1C-218	ENST00000399644	APOA5	Q6Q788	366 aa		11.59	□□□□□ -0.55
CACNA1C-218	ENST00000399644	LRRC39	Q96DD0	335 aa		11.59	□□□□□ -0.55
CACNA1C-218	ENST00000399644	FAM213A	Q9BRX8	229 aa		11.59	□□□□□ -0.55
CACNA1C-218	ENST00000399644	RPH3A	Q9Y2J0	694 aa	Predicted RBP	11.59	□□□□□ -0.55
CACNA1C-218	ENST00000399644	PLEKHG2	Q9H7P9	1386 aa		11.59	□□□□□ -0.55
CACNA1C-218	ENST00000399644	MBL2	P11226	248 aa	Predicted RBP	11.59	□□□□□ -0.55
CACNA1C-218	ENST00000399644	PCNA	P12004	261 aa		11.59	□□□□□ -0.55
CACNA1C-218	ENST00000399644	GJA8	P48165	433 aa		11.59	□□□□□ -0.55
CACNA1C-218	ENST00000399644	HIRA	P54198	1017 aa	Predicted RBP	11.59	□□□□□ -0.55
CACNA1C-218	ENST00000399644	EPHB3	P54753	998 aa		11.59	□□□□□ -0.55
CACNA1C-218	ENST00000399644	SLC45A4	Q5BKX6	768 aa		11.59	□□□□□ -0.55
CACNA1C-218	ENST00000399644	NEK7	Q8TDX7	302 aa		11.59	□□□□□ -0.55
CACNA1C-218	ENST00000399644	SLC9A6	Q92581	669 aa		11.59	□□□□□ -0.55
CACNA1C-218	ENST00000399644	EME1	Q96AY2	570 aa		11.59	□□□□□ -0.55
CACNA1C-218	ENST00000399644	SAPCD2	Q86UD0	394 aa		11.59	□□□□□ -0.55
CACNA1C-218	ENST00000399644	NSUN7	Q8NE18	718 aa	Known RBP	11.59	□□□□□ -0.55
CACNA1C-218	ENST00000399644	SYMPK	Q92797	1274 aa	Known RBP	11.59	□□□□□ -0.55
CACNA1C-218	ENST00000399644	DSE	Q9UL01	958 aa		11.59	□□□□□ -0.55
CACNA1C-218	ENST00000399644	SOWAHD	A6NJG2	315 aa		11.59	□□□□□ -0.55
CACNA1C-218	ENST00000399644	ATG7	O95352	703 aa		11.59	□□□□□ -0.55
CACNA1C-218	ENST00000399644	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	11.59	□□□□□ -0.55
CACNA1C-218	ENST00000399644	VCL	P18206	1134 aa		11.59	□□□□□ -0.55
CACNA1C-218	ENST00000399644	HIST1H2AD	P20671	130 aa		11.59	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms