RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 ZSCAN5CA6NGD5 496 aaPredicted RBP6.62□□□□□ -1.35
TRAPPC13-202ENST00000399438 MTSS1O43312 755 aa6.62□□□□□ -1.35
TRAPPC13-202ENST00000399438 TSC22D2O75157 780 aa6.62□□□□□ -1.35
TRAPPC13-202ENST00000399438 CILPO75339 1184 aa6.62□□□□□ -1.35
TRAPPC13-202ENST00000399438 ERAL1O75616 437 aaKnown RBP6.62□□□□□ -1.35
TRAPPC13-202ENST00000399438 FSBPO95073 299 aa6.62□□□□□ -1.35
TRAPPC13-202ENST00000399438 GSNP06396 782 aa6.62□□□□□ -1.35
TRAPPC13-202ENST00000399438 ACRP10323 421 aa6.62□□□□□ -1.35
TRAPPC13-202ENST00000399438 GPC3P51654 580 aa6.62□□□□□ -1.35
TRAPPC13-202ENST00000399438 SMTNP53814 917 aa6.62□□□□□ -1.35
TRAPPC13-202ENST00000399438 SUMO1P63165 101 aaKnown RBP6.62□□□□□ -1.35
TRAPPC13-202ENST00000399438 HSF5Q4G112 596 aaPredicted RBP6.62□□□□□ -1.35
TRAPPC13-202ENST00000399438 PIK3R6Q5UE93 754 aa6.62□□□□□ -1.35
TRAPPC13-202ENST00000399438 PGBD2Q6P3X8 592 aa6.62□□□□□ -1.35
TRAPPC13-202ENST00000399438 C11orf88Q6PI97 169 aa6.62□□□□□ -1.35
TRAPPC13-202ENST00000399438 SLC30A10Q6XR72 485 aa6.62□□□□□ -1.35
TRAPPC13-202ENST00000399438 TMTC3Q6ZXV5 915 aa6.62□□□□□ -1.35
TRAPPC13-202ENST00000399438 UNC45BQ8IWX7 931 aa6.62□□□□□ -1.35
TRAPPC13-202ENST00000399438 KIF18AQ8NI77 898 aa6.62□□□□□ -1.35
TRAPPC13-202ENST00000399438 CEP76Q8TAP6 659 aa6.62□□□□□ -1.35
TRAPPC13-202ENST00000399438 BSNDQ8WZ55 320 aa6.62□□□□□ -1.35
TRAPPC13-202ENST00000399438 PAGE5Q96GU1 130 aa6.62□□□□□ -1.35
TRAPPC13-202ENST00000399438 CABS1Q96KC9 395 aa6.62□□□□□ -1.35
TRAPPC13-202ENST00000399438 BRIP1Q9BX63 1249 aa6.62□□□□□ -1.35
TRAPPC13-202ENST00000399438 KAT14Q9H8E8 782 aa6.62□□□□□ -1.35
TRAPPC13-202ENST00000399438 MRPL44Q9H9J2 332 aaKnown RBP6.62□□□□□ -1.35
TRAPPC13-202ENST00000399438 CRLF2Q9HC73 371 aa6.62□□□□□ -1.35
TRAPPC13-202ENST00000399438 EVA1BQ9NVM1 165 aa6.62□□□□□ -1.35
TRAPPC13-202ENST00000399438 TRIM10Q9UDY6 481 aa6.62□□□□□ -1.35
TRAPPC13-202ENST00000399438 DDX60Q8IY21 1712 aaKnown RBP6.62□□□□□ -1.35
TRAPPC13-202ENST00000399438 COL6A2P12110 1019 aa6.62□□□□□ -1.35
TRAPPC13-202ENST00000399438 SLC16A2P36021 539 aa6.62□□□□□ -1.35
TRAPPC13-202ENST00000399438 KLK7P49862 253 aa6.62□□□□□ -1.35
TRAPPC13-202ENST00000399438 IL2P60568 153 aa6.62□□□□□ -1.35
TRAPPC13-202ENST00000399438 ZBTB16Q05516 673 aa6.62□□□□□ -1.35
TRAPPC13-202ENST00000399438 ALX1Q15699 326 aa6.62□□□□□ -1.35
TRAPPC13-202ENST00000399438 LETM2Q2VYF4 491 aa6.62□□□□□ -1.35
TRAPPC13-202ENST00000399438 RNF220Q5VTB9 566 aa6.62□□□□□ -1.35
TRAPPC13-202ENST00000399438 RCSD1Q6JBY9 416 aa6.62□□□□□ -1.35
TRAPPC13-202ENST00000399438 ANGPTL8Q6UXH0 198 aa6.62□□□□□ -1.35
TRAPPC13-202ENST00000399438 VSIG10LQ86VR7 867 aa6.62□□□□□ -1.35
TRAPPC13-202ENST00000399438 ALDH16A1Q8IZ83 802 aa6.62□□□□□ -1.35
TRAPPC13-202ENST00000399438 LRRC15Q8TF66 581 aa6.62□□□□□ -1.35
TRAPPC13-202ENST00000399438 RNF139Q8WU17 664 aa6.62□□□□□ -1.35
TRAPPC13-202ENST00000399438 ZFAND2BQ8WV99 257 aa6.62□□□□□ -1.35
TRAPPC13-202ENST00000399438 SGCDQ92629 289 aa6.62□□□□□ -1.35
TRAPPC13-202ENST00000399438 TRERF1Q96PN7 1200 aa6.62□□□□□ -1.35
TRAPPC13-202ENST00000399438 LRFN3Q9BTN0 628 aa6.62□□□□□ -1.35
TRAPPC13-202ENST00000399438 PLVAPQ9BX97 442 aa6.62□□□□□ -1.35
TRAPPC13-202ENST00000399438 OXCT2Q9BYC2 517 aaPredicted RBP6.62□□□□□ -1.35
TRAPPC13-202ENST00000399438 CRNKL1Q9BZJ0 848 aaKnown RBP6.62□□□□□ -1.35
TRAPPC13-202ENST00000399438 NT5C3AQ9H0P0 336 aa6.62□□□□□ -1.35
TRAPPC13-202ENST00000399438 PREBQ9HCU5 417 aa6.62□□□□□ -1.35
TRAPPC13-202ENST00000399438 TUBE1Q9UJT0 475 aa6.62□□□□□ -1.35
TRAPPC13-202ENST00000399438 GRID1Q9ULK0 1009 aa6.62□□□□□ -1.35
TRAPPC13-202ENST00000399438 PCDHB14Q9Y5E9 798 aa6.62□□□□□ -1.35
TRAPPC13-202ENST00000399438 TLL2Q9Y6L7 1015 aa6.62□□□□□ -1.35
TRAPPC13-202ENST00000399438 NRXN2Q9P2S2 1712 aa6.62□□□□□ -1.35
TRAPPC13-202ENST00000399438 CNTNAP5Q8WYK1 1306 aa6.62□□□□□ -1.35
TRAPPC13-202ENST00000399438 EREGO14944 169 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 POLR3GO15318 223 aaPredicted RBP6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 DAPK3O43293 454 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 CYTH3O43739 400 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 PPP6R2O75170 966 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 SIN3BO75182 1162 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 SEC22BO75396 215 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 PDHA1P08559 390 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 HARSP12081 509 aaKnown RBP6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 MAPK3P27361 379 aaPredicted RBP6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 ACSL1P33121 698 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 TIE1P35590 1138 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 TECP42680 631 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 ITGA8P53708 1063 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 TCP10Q12799 353 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 FBXO47Q5MNV8 452 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 B4GALNT4Q76KP1 1039 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 CNBD1Q8NA66 436 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 TTC16Q8NEE8 873 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 TSEN34Q9BSV6 310 aaKnown RBP6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 AARSD1Q9BTE6 412 aaKnown RBP6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 PLEKHA4Q9H4M7 779 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 EXTL2Q9UBQ6 330 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 MAGED2Q9UNF1 606 aaPredicted RBP6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 CORO2BQ9UQ03 480 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 INVSQ9Y283 1065 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 MRFAP1Q9Y605 127 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 XDHP47989 1333 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 TCRBV16S1A1N1A0A5B0 115 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 RGSL1A5PLK6 1076 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 TMCO5BA8MYB1 307 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 EML1O00423 815 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 NPC1O15118 1278 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 THAP12O43422 761 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 PAGE1O75459 146 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 RTN3O95197 1032 aaPredicted RBP6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 MYCP01106 439 aaPredicted RBP6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 OPN1MWP04001 364 aa6.61□□□□□ -1.35
TRAPPC13-202ENST00000399438 OPN1MW2P0DN77 364 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms