RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 AFF1P51825 1210 aaKnown RBP16.06■□□□□ 0.16
COL25A1-201ENST00000399126 LLGL1Q15334 1064 aa16.06■□□□□ 0.16
COL25A1-201ENST00000399126 SWT1Q5T5J6 900 aaKnown RBP16.06■□□□□ 0.16
COL25A1-201ENST00000399126 CYP4A22Q5TCH4 519 aa16.06■□□□□ 0.16
COL25A1-201ENST00000399126 TMCO3Q6UWJ1 677 aa16.06■□□□□ 0.16
COL25A1-201ENST00000399126 KLHL7Q8IXQ5 586 aa16.06■□□□□ 0.16
COL25A1-201ENST00000399126 RAET1EQ8TD07 263 aa16.06■□□□□ 0.16
COL25A1-201ENST00000399126 ACTRT1Q8TDG2 376 aa16.06■□□□□ 0.16
COL25A1-201ENST00000399126 CD101Q93033 1021 aa16.06■□□□□ 0.16
COL25A1-201ENST00000399126 SENP6Q9GZR1 1112 aaPredicted RBP16.06■□□□□ 0.16
COL25A1-201ENST00000399126 AVENQ9NQS1 362 aaPredicted RBP16.06■□□□□ 0.16
COL25A1-201ENST00000399126 RNF14Q9UBS8 474 aa16.06■□□□□ 0.16
COL25A1-201ENST00000399126 TRPV2Q9Y5S1 764 aa16.06■□□□□ 0.16
COL25A1-201ENST00000399126 SNX9Q9Y5X1 595 aa16.06■□□□□ 0.16
COL25A1-201ENST00000399126 O00370 1275 aa16.05■□□□□ 0.16
COL25A1-201ENST00000399126 CES2O00748 559 aa16.05■□□□□ 0.16
COL25A1-201ENST00000399126 SPOPO43791 374 aa16.05■□□□□ 0.16
COL25A1-201ENST00000399126 FGGP02679 453 aa16.05■□□□□ 0.16
COL25A1-201ENST00000399126 IBSPP21815 317 aaPredicted RBP16.05■□□□□ 0.16
COL25A1-201ENST00000399126 MMP8P22894 467 aa16.05■□□□□ 0.16
COL25A1-201ENST00000399126 THPOP40225 353 aa16.05■□□□□ 0.16
COL25A1-201ENST00000399126 NDST1P52848 882 aa16.05■□□□□ 0.16
COL25A1-201ENST00000399126 TNNC1P63316 161 aa16.05■□□□□ 0.16
COL25A1-201ENST00000399126 MAMLD1Q13495 774 aa16.05■□□□□ 0.16
COL25A1-201ENST00000399126 PTGISQ16647 500 aa16.05■□□□□ 0.16
COL25A1-201ENST00000399126 CD302Q8IX05 232 aa16.05■□□□□ 0.16
COL25A1-201ENST00000399126 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.05■□□□□ 0.16
COL25A1-201ENST00000399126 MRPL45Q9BRJ2 306 aaKnown RBP16.05■□□□□ 0.16
COL25A1-201ENST00000399126 DDX20Q9UHI6 824 aaKnown RBP16.05■□□□□ 0.16
COL25A1-201ENST00000399126 TMEM59LQ9UK28 342 aa16.05■□□□□ 0.16
COL25A1-201ENST00000399126 PGRMC1O00264 195 aaKnown RBP16.05■□□□□ 0.16
COL25A1-201ENST00000399126 RPS6KA5O75582 802 aa16.05■□□□□ 0.16
COL25A1-201ENST00000399126 SASH3O75995 380 aa16.05■□□□□ 0.16
COL25A1-201ENST00000399126 PEX5P50542 639 aa16.05■□□□□ 0.16
COL25A1-201ENST00000399126 RPL7AP62424 266 aaKnown RBP16.05■□□□□ 0.16
COL25A1-201ENST00000399126 PTPN11Q06124 597 aaPredicted RBP16.05■□□□□ 0.16
COL25A1-201ENST00000399126 ZKSCAN8Q15776 578 aaPredicted RBP16.05■□□□□ 0.16
COL25A1-201ENST00000399126 SRLQ86TD4 932 aa16.05■□□□□ 0.16
COL25A1-201ENST00000399126 NT5DC4Q86YG4 428 aa16.05■□□□□ 0.16
COL25A1-201ENST00000399126 RASGEF1CQ8N431 466 aa16.05■□□□□ 0.16
COL25A1-201ENST00000399126 C12orf29Q8N999 325 aa16.05■□□□□ 0.16
COL25A1-201ENST00000399126 RNPC3Q96LT9 517 aaKnown RBP16.05■□□□□ 0.16
COL25A1-201ENST00000399126 CCDC151A5D8V7 595 aa16.04■□□□□ 0.16
COL25A1-201ENST00000399126 M0QZ92 97 aa16.04■□□□□ 0.16
COL25A1-201ENST00000399126 LAMA2P24043 3122 aaKnown RBP16.04■□□□□ 0.16
COL25A1-201ENST00000399126 TUBB4BP68371 445 aa16.04■□□□□ 0.16
COL25A1-201ENST00000399126 LPPQ93052 612 aa16.04■□□□□ 0.16
COL25A1-201ENST00000399126 TMEM176AQ96HP8 235 aa16.04■□□□□ 0.16
COL25A1-201ENST00000399126 LPIN3Q9BQK8 851 aa16.04■□□□□ 0.16
COL25A1-201ENST00000399126 SELENOOQ9BVL4 669 aa16.04■□□□□ 0.16
COL25A1-201ENST00000399126 SPTLC1O15269 473 aa16.04■□□□□ 0.16
COL25A1-201ENST00000399126 MYBL1P10243 752 aa16.04■□□□□ 0.16
COL25A1-201ENST00000399126 CYP3A5P20815 502 aa16.04■□□□□ 0.16
COL25A1-201ENST00000399126 YWHAEP62258 255 aaKnown RBP16.04■□□□□ 0.16
COL25A1-201ENST00000399126 MGAT3Q09327 533 aa16.04■□□□□ 0.16
COL25A1-201ENST00000399126 PTPN20Q4JDL3 420 aa16.04■□□□□ 0.16
COL25A1-201ENST00000399126 C9orf57Q5W0N0 161 aa16.04■□□□□ 0.16
COL25A1-201ENST00000399126 C8orf74Q6P047 294 aa16.04■□□□□ 0.16
COL25A1-201ENST00000399126 GDAP1L1Q96MZ0 367 aa16.04■□□□□ 0.16
COL25A1-201ENST00000399126 CFHR5Q9BXR6 569 aa16.04■□□□□ 0.16
COL25A1-201ENST00000399126 DDX47Q9H0S4 455 aaKnown RBP16.04■□□□□ 0.16
COL25A1-201ENST00000399126 LCMT1Q9UIC8 334 aa16.04■□□□□ 0.16
COL25A1-201ENST00000399126 PCDHGC3Q9UN70 934 aa16.04■□□□□ 0.16
COL25A1-201ENST00000399126 ESYT3A0FGR9 886 aa16.03■□□□□ 0.16
COL25A1-201ENST00000399126 C1QBPQ07021 282 aaKnown RBP16.03■□□□□ 0.16
COL25A1-201ENST00000399126 BRD3Q15059 726 aa16.03■□□□□ 0.16
COL25A1-201ENST00000399126 LONRF2Q1L5Z9 754 aa16.03■□□□□ 0.16
COL25A1-201ENST00000399126 BEND6Q5SZJ8 279 aaPredicted RBP16.03■□□□□ 0.16
COL25A1-201ENST00000399126 PLEKHA7Q6IQ23 1121 aa16.03■□□□□ 0.16
COL25A1-201ENST00000399126 WDR93Q6P2C0 686 aa16.03■□□□□ 0.16
COL25A1-201ENST00000399126 ZNF784Q8NCA9 323 aaPredicted RBP16.03■□□□□ 0.16
COL25A1-201ENST00000399126 TMEM35BQ8NCS4 154 aa16.03■□□□□ 0.16
COL25A1-201ENST00000399126 BEST2Q8NFU1 509 aa16.03■□□□□ 0.16
COL25A1-201ENST00000399126 PMM1Q92871 262 aa16.03■□□□□ 0.16
COL25A1-201ENST00000399126 RPS6KC1Q96S38 1066 aa16.03■□□□□ 0.16
COL25A1-201ENST00000399126 CARD9Q9H257 536 aa16.03■□□□□ 0.16
COL25A1-201ENST00000399126 DERAQ9Y315 318 aa16.03■□□□□ 0.16
COL25A1-201ENST00000399126 KRIT1O00522 736 aa16.03■□□□□ 0.16
COL25A1-201ENST00000399126 PTGESO14684 152 aa16.03■□□□□ 0.16
COL25A1-201ENST00000399126 INHAP05111 366 aa16.03■□□□□ 0.16
COL25A1-201ENST00000399126 GLI1P08151 1106 aa16.03■□□□□ 0.16
COL25A1-201ENST00000399126 GHRP10912 638 aa16.03■□□□□ 0.16
COL25A1-201ENST00000399126 PYGMP11217 842 aa16.03■□□□□ 0.16
COL25A1-201ENST00000399126 CST5P28325 142 aaPredicted RBP16.03■□□□□ 0.16
COL25A1-201ENST00000399126 CD52P31358 61 aa16.03■□□□□ 0.16
COL25A1-201ENST00000399126 CDR1P51861 262 aa16.03■□□□□ 0.16
COL25A1-201ENST00000399126 ACLYP53396 1101 aa16.03■□□□□ 0.16
COL25A1-201ENST00000399126 MYO1EQ12965 1108 aa16.03■□□□□ 0.16
COL25A1-201ENST00000399126 ITGA7Q13683 1181 aa16.03■□□□□ 0.16
COL25A1-201ENST00000399126 ZNF618Q5T7W0 954 aa16.03■□□□□ 0.16
COL25A1-201ENST00000399126 SUGP1Q8IWZ8 645 aaKnown RBP16.03■□□□□ 0.16
COL25A1-201ENST00000399126 ZNF296Q8WUU4 475 aaPredicted RBP16.03■□□□□ 0.16
COL25A1-201ENST00000399126 TRIM11Q96F44 468 aa16.03■□□□□ 0.16
COL25A1-201ENST00000399126 HEXIM2Q96MH2 286 aaKnown RBP16.03■□□□□ 0.16
COL25A1-201ENST00000399126 CYP3A43Q9HB55 503 aa16.03■□□□□ 0.16
COL25A1-201ENST00000399126 ERVK-5Q9HDB9 667 aa16.03■□□□□ 0.16
COL25A1-201ENST00000399126 ARFGAP3Q9NP61 516 aa16.03■□□□□ 0.16
COL25A1-201ENST00000399126 BARX2Q9UMQ3 279 aaPredicted RBP16.03■□□□□ 0.16
COL25A1-201ENST00000399126 STAU1O95793 577 aaKnown RBP16.02■□□□□ 0.16
COL25A1-201ENST00000399126 P4HA1P13674 534 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms