RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 ZFXP17010 805 aaPredicted RBP15.29■□□□□ 0.04
RPRD1A-202ENST00000399022 PRKCEQ02156 737 aa15.29■□□□□ 0.04
RPRD1A-202ENST00000399022 ZNF268Q14587 947 aaPredicted RBP15.29■□□□□ 0.04
RPRD1A-202ENST00000399022 DACT2Q5SW24 774 aa15.29■□□□□ 0.04
RPRD1A-202ENST00000399022 RNF149Q8NC42 400 aa15.29■□□□□ 0.04
RPRD1A-202ENST00000399022 SLC35C1Q96A29 364 aa15.29■□□□□ 0.04
RPRD1A-202ENST00000399022 NDNQ99608 321 aa15.29■□□□□ 0.04
RPRD1A-202ENST00000399022 DEFB129Q9H1M3 183 aa15.29■□□□□ 0.04
RPRD1A-202ENST00000399022 ADA2Q9NZK5 511 aa15.29■□□□□ 0.04
RPRD1A-202ENST00000399022 IL1RAPL1Q9NZN1 696 aa15.29■□□□□ 0.04
RPRD1A-202ENST00000399022 FAM198AQ9UFP1 575 aa15.29■□□□□ 0.04
RPRD1A-202ENST00000399022 SLC12A6Q9UHW9 1150 aa15.29■□□□□ 0.04
RPRD1A-202ENST00000399022 LIN7AO14910 233 aaPredicted RBP15.29■□□□□ 0.04
RPRD1A-202ENST00000399022 SGPL1O95470 568 aa15.29■□□□□ 0.04
RPRD1A-202ENST00000399022 FECHP22830 423 aa15.29■□□□□ 0.04
RPRD1A-202ENST00000399022 INPP5DQ92835 1189 aa15.29■□□□□ 0.04
RPRD1A-202ENST00000399022 CNBD2Q96M20 576 aa15.29■□□□□ 0.04
RPRD1A-202ENST00000399022 PURBQ96QR8 312 aaKnown RBP15.29■□□□□ 0.04
RPRD1A-202ENST00000399022 TEX13BQ9BXU2 312 aa15.29■□□□□ 0.04
RPRD1A-202ENST00000399022 MYOZ2Q9NPC6 264 aa15.29■□□□□ 0.04
RPRD1A-202ENST00000399022 WHRNQ9P202 907 aa15.29■□□□□ 0.04
RPRD1A-202ENST00000399022 DTNAQ9Y4J8 743 aa15.29■□□□□ 0.04
RPRD1A-202ENST00000399022 RNF103-CHMP3A0A140T963 221 aa15.29■□□□□ 0.04
RPRD1A-202ENST00000399022 KIAA0391O15091 583 aaKnown RBP15.29■□□□□ 0.04
RPRD1A-202ENST00000399022 Q4G0T1 1027 aa15.29■□□□□ 0.04
RPRD1A-202ENST00000399022 CDR2LQ86X02 465 aaPredicted RBP15.29■□□□□ 0.04
RPRD1A-202ENST00000399022 UPF3AQ9H1J1 476 aaKnown RBP15.29■□□□□ 0.04
RPRD1A-202ENST00000399022 VPS11Q9H270 941 aa15.29■□□□□ 0.04
RPRD1A-202ENST00000399022 TMEM165Q9HC07 324 aa15.29■□□□□ 0.04
RPRD1A-202ENST00000399022 SEC24DO94855 1032 aaPredicted RBP15.29■□□□□ 0.04
RPRD1A-202ENST00000399022 ZBED1O96006 694 aa15.29■□□□□ 0.04
RPRD1A-202ENST00000399022 NUDT17P0C025 328 aa15.29■□□□□ 0.04
RPRD1A-202ENST00000399022 AP1B1Q10567 949 aa15.29■□□□□ 0.04
RPRD1A-202ENST00000399022 STX3Q13277 289 aa15.29■□□□□ 0.04
RPRD1A-202ENST00000399022 DPY19L2Q6NUT2 758 aa15.29■□□□□ 0.04
RPRD1A-202ENST00000399022 PPP2R3CQ969Q6 453 aa15.29■□□□□ 0.04
RPRD1A-202ENST00000399022 TARS2Q9BW92 718 aaKnown RBP15.29■□□□□ 0.04
RPRD1A-202ENST00000399022 FGFBP2Q9BYJ0 223 aa15.29■□□□□ 0.04
RPRD1A-202ENST00000399022 DCAF8L1A6NGE4 600 aa15.28■□□□□ 0.04
RPRD1A-202ENST00000399022 A6NJR5 290 aa15.28■□□□□ 0.04
RPRD1A-202ENST00000399022 TISP43B9A030 160 aa15.28■□□□□ 0.04
RPRD1A-202ENST00000399022 MEIS2O14770 477 aa15.28■□□□□ 0.04
RPRD1A-202ENST00000399022 SLC26A4O43511 780 aa15.28■□□□□ 0.04
RPRD1A-202ENST00000399022 RASA2Q15283 850 aa15.28■□□□□ 0.04
RPRD1A-202ENST00000399022 FITM2Q8N6M3 262 aa15.28■□□□□ 0.04
RPRD1A-202ENST00000399022 TRAPPC9Q96Q05 1148 aa15.28■□□□□ 0.04
RPRD1A-202ENST00000399022 SLCO1B3Q9NPD5 702 aa15.28■□□□□ 0.04
RPRD1A-202ENST00000399022 USP20Q9Y2K6 914 aa15.28■□□□□ 0.04
RPRD1A-202ENST00000399022 MED7O43513 233 aa15.28■□□□□ 0.04
RPRD1A-202ENST00000399022 KDM1AO60341 852 aa15.28■□□□□ 0.04
RPRD1A-202ENST00000399022 PTK7Q13308 1070 aa15.28■□□□□ 0.04
RPRD1A-202ENST00000399022 TMEM120AQ9BXJ8 343 aa15.28■□□□□ 0.04
RPRD1A-202ENST00000399022 IKZF4Q9H2S9 585 aa15.28■□□□□ 0.04
RPRD1A-202ENST00000399022 TOPORSQ9NS56 1045 aaPredicted RBP15.28■□□□□ 0.04
RPRD1A-202ENST00000399022 CLIC5Q9NZA1 410 aa15.28■□□□□ 0.04
RPRD1A-202ENST00000399022 ARMCX1Q9P291 453 aa15.28■□□□□ 0.04
RPRD1A-202ENST00000399022 EME2A4GXA9 379 aaPredicted RBP15.28■□□□□ 0.04
RPRD1A-202ENST00000399022 PIK3R2O00459 728 aa15.28■□□□□ 0.04
RPRD1A-202ENST00000399022 PRPSAP2O60256 369 aa15.28■□□□□ 0.04
RPRD1A-202ENST00000399022 PSMG1O95456 288 aa15.28■□□□□ 0.04
RPRD1A-202ENST00000399022 ICAM1P05362 532 aa15.28■□□□□ 0.04
RPRD1A-202ENST00000399022 SLC12A3P55017 1021 aa15.28■□□□□ 0.04
RPRD1A-202ENST00000399022 XKR3Q5GH77 459 aa15.28■□□□□ 0.04
RPRD1A-202ENST00000399022 ANGEL2Q5VTE6 544 aaKnown RBP15.28■□□□□ 0.04
RPRD1A-202ENST00000399022 OTOP1Q7RTM1 612 aa15.28■□□□□ 0.04
RPRD1A-202ENST00000399022 FAM13CQ8NE31 585 aa15.28■□□□□ 0.04
RPRD1A-202ENST00000399022 GMCL1P1Q8NEA9 526 aa15.28■□□□□ 0.04
RPRD1A-202ENST00000399022 EME1Q96AY2 570 aa15.28■□□□□ 0.04
RPRD1A-202ENST00000399022 CATSPER2Q96P56 530 aa15.28■□□□□ 0.04
RPRD1A-202ENST00000399022 FOXP3Q9BZS1 431 aa15.28■□□□□ 0.04
RPRD1A-202ENST00000399022 CHD2O14647 1828 aaKnown RBP15.28■□□□□ 0.04
RPRD1A-202ENST00000399022 RARAP10276 462 aa15.27■□□□□ 0.04
RPRD1A-202ENST00000399022 STAT5BP51692 787 aa15.27■□□□□ 0.04
RPRD1A-202ENST00000399022 KLC3Q6P597 504 aa15.27■□□□□ 0.04
RPRD1A-202ENST00000399022 CCNYQ8ND76 341 aa15.27■□□□□ 0.04
RPRD1A-202ENST00000399022 ZNF280CQ8ND82 737 aa15.27■□□□□ 0.04
RPRD1A-202ENST00000399022 CERKQ8TCT0 537 aa15.27■□□□□ 0.04
RPRD1A-202ENST00000399022 HEY1Q9Y5J3 304 aa15.27■□□□□ 0.04
RPRD1A-202ENST00000399022 UBE4BO95155 1302 aa15.27■□□□□ 0.04
RPRD1A-202ENST00000399022 PPP1R11O60927 126 aaPredicted RBP15.27■□□□□ 0.04
RPRD1A-202ENST00000399022 HLA-DRAP01903 254 aa15.27■□□□□ 0.04
RPRD1A-202ENST00000399022 PYGMP11217 842 aa15.27■□□□□ 0.04
RPRD1A-202ENST00000399022 ABCD1P33897 745 aa15.27■□□□□ 0.04
RPRD1A-202ENST00000399022 BNIP1Q12981 228 aa15.27■□□□□ 0.04
RPRD1A-202ENST00000399022 LRRC6Q86X45 466 aa15.27■□□□□ 0.04
RPRD1A-202ENST00000399022 NRBF2Q96F24 287 aa15.27■□□□□ 0.04
RPRD1A-202ENST00000399022 CAAP1Q9H8G2 361 aa15.27■□□□□ 0.04
RPRD1A-202ENST00000399022 DMAP1Q9NPF5 467 aaPredicted RBP15.27■□□□□ 0.04
RPRD1A-202ENST00000399022 KCPQ6ZWJ8 1503 aa15.27■□□□□ 0.04
RPRD1A-202ENST00000399022 SMNDC1O75940 238 aaKnown RBP eCLIP15.27■□□□□ 0.036e-12■■■■■ 51.5
RPRD1A-202ENST00000399022 GCLCP48506 637 aaPredicted RBP15.27■□□□□ 0.03
RPRD1A-202ENST00000399022 RRP1BQ14684 758 aaKnown RBP15.27■□□□□ 0.03
RPRD1A-202ENST00000399022 JADE1Q6IE81 842 aa15.27■□□□□ 0.03
RPRD1A-202ENST00000399022 DHX38Q92620 1227 aaKnown RBP15.27■□□□□ 0.03
RPRD1A-202ENST00000399022 SHISA4Q96DD7 197 aa15.27■□□□□ 0.03
RPRD1A-202ENST00000399022 NMRK1Q9NWW6 199 aa15.27■□□□□ 0.03
RPRD1A-202ENST00000399022 RGL2O15211 777 aa15.27■□□□□ 0.03
RPRD1A-202ENST00000399022 OCA2Q04671 838 aa15.27■□□□□ 0.03
RPRD1A-202ENST00000399022 SPDYCQ5MJ68 293 aa15.27■□□□□ 0.03
RPRD1A-202ENST00000399022 RNF43Q68DV7 783 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms