RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 ACVR2BQ13705 512 aa10.42□□□□□ -0.74
PTCHD4-202ENST00000398738 PTK6Q13882 451 aa10.42□□□□□ -0.74
PTCHD4-202ENST00000398738 WASHC2DQ5SRD0 308 aa10.42□□□□□ -0.74
PTCHD4-202ENST00000398738 RINLQ6ZS11 566 aa10.42□□□□□ -0.74
PTCHD4-202ENST00000398738 TAS1R2Q8TE23 839 aa10.42□□□□□ -0.74
PTCHD4-202ENST00000398738 JDP2Q8WYK2 163 aa10.42□□□□□ -0.74
PTCHD4-202ENST00000398738 EZH1Q92800 747 aaPredicted RBP10.42□□□□□ -0.74
PTCHD4-202ENST00000398738 INPP5DQ92835 1189 aa10.42□□□□□ -0.74
PTCHD4-202ENST00000398738 WDR18Q9BV38 432 aa10.42□□□□□ -0.74
PTCHD4-202ENST00000398738 MOV10L1Q9BXT6 1211 aaKnown RBP10.42□□□□□ -0.74
PTCHD4-202ENST00000398738 OSBPL8Q9BZF1 889 aa10.42□□□□□ -0.74
PTCHD4-202ENST00000398738 HSPBP1Q9NZL4 362 aa10.42□□□□□ -0.74
PTCHD4-202ENST00000398738 NOCTQ9UK39 431 aaKnown RBP10.42□□□□□ -0.74
PTCHD4-202ENST00000398738 GTF3C4Q9UKN8 822 aa10.42□□□□□ -0.74
PTCHD4-202ENST00000398738 DNPEPQ9ULA0 475 aa10.42□□□□□ -0.74
PTCHD4-202ENST00000398738 LRCH1Q9Y2L9 728 aa10.42□□□□□ -0.74
PTCHD4-202ENST00000398738 H3BRJ5 948 aa10.41□□□□□ -0.74
PTCHD4-202ENST00000398738 GSC2O15499 205 aa10.41□□□□□ -0.74
PTCHD4-202ENST00000398738 CCDC22O60826 627 aa10.41□□□□□ -0.74
PTCHD4-202ENST00000398738 NPTXRO95502 500 aa10.41□□□□□ -0.74
PTCHD4-202ENST00000398738 GSTT1P30711 240 aa10.41□□□□□ -0.74
PTCHD4-202ENST00000398738 PGM1P36871 562 aa10.41□□□□□ -0.74
PTCHD4-202ENST00000398738 ARFIP2P53365 341 aa10.41□□□□□ -0.74
PTCHD4-202ENST00000398738 CUL3Q13618 768 aa10.41□□□□□ -0.74
PTCHD4-202ENST00000398738 PDK4Q16654 411 aa10.41□□□□□ -0.74
PTCHD4-202ENST00000398738 SLC10A5Q5PT55 438 aa10.41□□□□□ -0.74
PTCHD4-202ENST00000398738 OR52E8Q6IFG1 317 aa10.41□□□□□ -0.74
PTCHD4-202ENST00000398738 KBTBD2Q8IY47 623 aa10.41□□□□□ -0.74
PTCHD4-202ENST00000398738 TCP10LQ8TDR4 215 aa10.41□□□□□ -0.74
PTCHD4-202ENST00000398738 POMGNT1Q8WZA1 660 aa10.41□□□□□ -0.74
PTCHD4-202ENST00000398738 PTPRN2Q92932 1015 aa10.41□□□□□ -0.74
PTCHD4-202ENST00000398738 FAM20AQ96MK3 541 aa10.41□□□□□ -0.74
PTCHD4-202ENST00000398738 LXNQ9BS40 222 aa10.41□□□□□ -0.74
PTCHD4-202ENST00000398738 F5H6K3 240 aa10.41□□□□□ -0.74
PTCHD4-202ENST00000398738 SGK1O00141 431 aa10.41□□□□□ -0.74
PTCHD4-202ENST00000398738 OPHN1O60890 802 aa10.41□□□□□ -0.74
PTCHD4-202ENST00000398738 PEX3P56589 373 aa10.41□□□□□ -0.74
PTCHD4-202ENST00000398738 CCDC15Q0P6D6 951 aa10.41□□□□□ -0.74
PTCHD4-202ENST00000398738 TFDP1Q14186 410 aa10.41□□□□□ -0.74
PTCHD4-202ENST00000398738 ZNF568Q3ZCX4 644 aa10.41□□□□□ -0.74
PTCHD4-202ENST00000398738 SYDE2Q5VT97 1194 aa10.41□□□□□ -0.74
PTCHD4-202ENST00000398738 CCDC62Q6P9F0 684 aa10.41□□□□□ -0.74
PTCHD4-202ENST00000398738 THSD4Q6ZMP0 1018 aa10.41□□□□□ -0.74
PTCHD4-202ENST00000398738 PHTF2Q8N3S3 785 aa10.41□□□□□ -0.74
PTCHD4-202ENST00000398738 HSD17B14Q9BPX1 270 aa10.41□□□□□ -0.74
PTCHD4-202ENST00000398738 SHANK3Q9BYB0 1731 aa10.41□□□□□ -0.74
PTCHD4-202ENST00000398738 CCDC195A0A1B0GUA6 201 aa10.41□□□□□ -0.74
PTCHD4-202ENST00000398738 B2RBV5 119 aa10.41□□□□□ -0.74
PTCHD4-202ENST00000398738 TXNDC9O14530 226 aa10.41□□□□□ -0.74
PTCHD4-202ENST00000398738 EIF3DO15371 548 aaKnown RBP eCLIP10.41□□□□□ -0.74
PTCHD4-202ENST00000398738 PSMG1O95456 288 aa10.41□□□□□ -0.74
PTCHD4-202ENST00000398738 HLA-DOAP06340 250 aa10.41□□□□□ -0.74
PTCHD4-202ENST00000398738 ARP10275 920 aa10.41□□□□□ -0.74
PTCHD4-202ENST00000398738 TCF4P15884 667 aa10.41□□□□□ -0.74
PTCHD4-202ENST00000398738 GCAP28676 217 aa10.41□□□□□ -0.74
PTCHD4-202ENST00000398738 MFAP3P55082 362 aa10.41□□□□□ -0.74
PTCHD4-202ENST00000398738 SLC34A1Q06495 639 aa10.41□□□□□ -0.74
PTCHD4-202ENST00000398738 GRAPQ13588 217 aa10.41□□□□□ -0.74
PTCHD4-202ENST00000398738 MEX3CQ5U5Q3 659 aaKnown RBP10.41□□□□□ -0.74
PTCHD4-202ENST00000398738 ZNF772Q68DY9 489 aaPredicted RBP10.41□□□□□ -0.74
PTCHD4-202ENST00000398738 IRGCQ6NXR0 463 aa10.41□□□□□ -0.74
PTCHD4-202ENST00000398738 IZUMO2Q6UXV1 221 aa10.41□□□□□ -0.74
PTCHD4-202ENST00000398738 OTOP1Q7RTM1 612 aa10.41□□□□□ -0.74
PTCHD4-202ENST00000398738 XXYLT1Q8NBI6 393 aa10.41□□□□□ -0.74
PTCHD4-202ENST00000398738 FBXO27Q8NI29 283 aa10.41□□□□□ -0.74
PTCHD4-202ENST00000398738 GRAPLQ8TC17 118 aaPredicted RBP10.41□□□□□ -0.74
PTCHD4-202ENST00000398738 FIZ1Q96SL8 496 aa10.41□□□□□ -0.74
PTCHD4-202ENST00000398738 GORASP1Q9BQQ3 440 aa10.41□□□□□ -0.74
PTCHD4-202ENST00000398738 ARHGAP9Q9BRR9 750 aa10.41□□□□□ -0.74
PTCHD4-202ENST00000398738 BTBD10Q9BSF8 475 aa10.41□□□□□ -0.74
PTCHD4-202ENST00000398738 TMEM121Q9BTD3 319 aa10.41□□□□□ -0.74
PTCHD4-202ENST00000398738 UBE2OQ9C0C9 1292 aaKnown RBP10.41□□□□□ -0.74
PTCHD4-202ENST00000398738 ARAP2Q8WZ64 1704 aa10.4□□□□□ -0.74
PTCHD4-202ENST00000398738 CYP3A7-CYP3A51PA0A087WV96 503 aa10.4□□□□□ -0.74
PTCHD4-202ENST00000398738 STK10O94804 968 aaKnown RBP10.4□□□□□ -0.74
PTCHD4-202ENST00000398738 TJP3O95049 919 aa10.4□□□□□ -0.74
PTCHD4-202ENST00000398738 ADRB2P07550 413 aa10.4□□□□□ -0.74
PTCHD4-202ENST00000398738 CYP3A7P24462 503 aa10.4□□□□□ -0.74
PTCHD4-202ENST00000398738 TRAF7Q6Q0C0 670 aa10.4□□□□□ -0.74
PTCHD4-202ENST00000398738 POTEAQ6S8J7 498 aa10.4□□□□□ -0.74
PTCHD4-202ENST00000398738 ALYREFQ86V81 257 aaKnown RBP10.4□□□□□ -0.74
PTCHD4-202ENST00000398738 THTPAQ9BU02 230 aa10.4□□□□□ -0.74
PTCHD4-202ENST00000398738 TRIM55Q9BYV6 548 aa10.4□□□□□ -0.74
PTCHD4-202ENST00000398738 SHCBP1LQ9BZQ2 653 aa10.4□□□□□ -0.74
PTCHD4-202ENST00000398738 DMAC2Q9NW81 257 aa10.4□□□□□ -0.74
PTCHD4-202ENST00000398738 TAS2R1Q9NYW7 299 aa10.4□□□□□ -0.74
PTCHD4-202ENST00000398738 ANKFY1Q9P2R3 1169 aa10.4□□□□□ -0.74
PTCHD4-202ENST00000398738 LGALS13Q9UHV8 139 aa10.4□□□□□ -0.74
PTCHD4-202ENST00000398738 FAM237BA0A1B0GVD1 139 aa10.4□□□□□ -0.74
PTCHD4-202ENST00000398738 CYP1A2P05177 515 aa10.4□□□□□ -0.74
PTCHD4-202ENST00000398738 SOX10P56693 466 aa10.4□□□□□ -0.74
PTCHD4-202ENST00000398738 IRX4P78413 519 aa10.4□□□□□ -0.74
PTCHD4-202ENST00000398738 GABPAQ06546 454 aa10.4□□□□□ -0.74
PTCHD4-202ENST00000398738 ZRSR2Q15696 482 aaKnown RBP10.4□□□□□ -0.74
PTCHD4-202ENST00000398738 BBS9Q3SYG4 887 aa10.4□□□□□ -0.74
PTCHD4-202ENST00000398738 LRRC23Q53EV4 343 aaPredicted RBP10.4□□□□□ -0.74
PTCHD4-202ENST00000398738 FAM71AQ8IYT1 594 aa10.4□□□□□ -0.74
PTCHD4-202ENST00000398738 ENDOVQ8N8Q3 282 aaKnown RBP10.4□□□□□ -0.74
PTCHD4-202ENST00000398738 NSL1Q96IY1 281 aa10.4□□□□□ -0.74
PTCHD4-202ENST00000398738 FAM111AQ96PZ2 611 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms