RNA–Protein interactions for RNA: ENST00000398179.3

CCBE1-201, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 5 BASIC

Gene CCBE1, Length 5,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-201ENST00000398179 CKAP2Q8WWK9 683 aa13.34□□□□□ -0.27
CCBE1-201ENST00000398179 SUCLG2Q96I99 432 aa13.34□□□□□ -0.27
CCBE1-201ENST00000398179 MYL10Q9BUA6 226 aa13.34□□□□□ -0.27
CCBE1-201ENST00000398179 ANKFY1Q9P2R3 1169 aa13.34□□□□□ -0.27
CCBE1-201ENST00000398179 UBN2Q6ZU65 1347 aa13.34□□□□□ -0.27
CCBE1-201ENST00000398179 FADS2P1A8MWK0 482 aa13.34□□□□□ -0.27
CCBE1-201ENST00000398179 TXNL1O43396 289 aa13.34□□□□□ -0.27
CCBE1-201ENST00000398179 MARK3P27448 753 aa13.34□□□□□ -0.27
CCBE1-201ENST00000398179 HLA-FP30511 346 aa13.34□□□□□ -0.27
CCBE1-201ENST00000398179 PGM2L1Q6PCE3 622 aa13.34□□□□□ -0.27
CCBE1-201ENST00000398179 ANKFN1Q8N957 763 aa13.34□□□□□ -0.27
CCBE1-201ENST00000398179 PIK3C3Q8NEB9 887 aa13.34□□□□□ -0.27
CCBE1-201ENST00000398179 TUT1Q9H6E5 874 aaKnown RBP13.34□□□□□ -0.27
CCBE1-201ENST00000398179 CHKBQ9Y259 395 aa13.34□□□□□ -0.27
CCBE1-201ENST00000398179 PPP2R2CQ9Y2T4 447 aa13.34□□□□□ -0.27
CCBE1-201ENST00000398179 VWA3AA6NCI4 1184 aa13.33□□□□□ -0.27
CCBE1-201ENST00000398179 EIF3DO15371 548 aaKnown RBP eCLIP13.33□□□□□ -0.27
CCBE1-201ENST00000398179 RAB2AP61019 212 aa13.33□□□□□ -0.27
CCBE1-201ENST00000398179 RAB5BP61020 215 aa13.33□□□□□ -0.27
CCBE1-201ENST00000398179 RAD51Q06609 339 aa13.33□□□□□ -0.27
CCBE1-201ENST00000398179 LIN9Q5TKA1 542 aa13.33□□□□□ -0.27
CCBE1-201ENST00000398179 FBXO42Q6P3S6 717 aa13.33□□□□□ -0.27
CCBE1-201ENST00000398179 CYP2U1Q7Z449 544 aa13.33□□□□□ -0.27
CCBE1-201ENST00000398179 ANKRD44Q8N8A2 993 aa13.33□□□□□ -0.27
CCBE1-201ENST00000398179 SLC7A3Q8WY07 619 aa13.33□□□□□ -0.27
CCBE1-201ENST00000398179 PLEKHA8Q96JA3 519 aa13.33□□□□□ -0.27
CCBE1-201ENST00000398179 TAB2Q9NYJ8 693 aa13.33□□□□□ -0.27
CCBE1-201ENST00000398179 PMPCBO75439 489 aa13.33□□□□□ -0.28
CCBE1-201ENST00000398179 MED26O95402 600 aa13.33□□□□□ -0.28
CCBE1-201ENST00000398179 ATP5F1P24539 256 aaPredicted RBP13.33□□□□□ -0.28
CCBE1-201ENST00000398179 C2CD6Q53TS8 623 aa13.33□□□□□ -0.28
CCBE1-201ENST00000398179 ITIH6Q6UXX5 1313 aa13.33□□□□□ -0.28
CCBE1-201ENST00000398179 THOC2Q8NI27 1593 aaKnown RBP13.33□□□□□ -0.28
CCBE1-201ENST00000398179 KRIT1O00522 736 aa13.33□□□□□ -0.28
CCBE1-201ENST00000398179 ITGB1P05556 798 aa13.33□□□□□ -0.28
CCBE1-201ENST00000398179 NAPAP54920 295 aa13.33□□□□□ -0.28
CCBE1-201ENST00000398179 PRKCZQ05513 592 aa13.33□□□□□ -0.28
CCBE1-201ENST00000398179 MCL1Q07820 350 aa13.33□□□□□ -0.28
CCBE1-201ENST00000398179 PTCD3Q96EY7 689 aaKnown RBP13.33□□□□□ -0.28
CCBE1-201ENST00000398179 GGA1Q9UJY5 639 aa13.33□□□□□ -0.28
CCBE1-201ENST00000398179 CA5BQ9Y2D0 317 aa13.33□□□□□ -0.28
CCBE1-201ENST00000398179 ANKRD6Q9Y2G4 727 aa13.33□□□□□ -0.28
CCBE1-201ENST00000398179 EMILIN1Q9Y6C2 1016 aa13.33□□□□□ -0.28
CCBE1-201ENST00000398179 CCT8L1PA6NM43 557 aa13.33□□□□□ -0.28
CCBE1-201ENST00000398179 HSF2Q03933 536 aa13.33□□□□□ -0.28
CCBE1-201ENST00000398179 BTKQ06187 659 aa13.33□□□□□ -0.28
CCBE1-201ENST00000398179 PABPC4Q13310 644 aaKnown RBP eCLIP13.33□□□□□ -0.28
CCBE1-201ENST00000398179 PLEKHG6Q3KR16 790 aa13.33□□□□□ -0.28
CCBE1-201ENST00000398179 RBM14Q96PK6 669 aaKnown RBP13.33□□□□□ -0.28
CCBE1-201ENST00000398179 VPS25Q9BRG1 176 aa13.33□□□□□ -0.28
CCBE1-201ENST00000398179 DCLRE1BQ9H816 532 aa13.33□□□□□ -0.28
CCBE1-201ENST00000398179 RTEL1Q9NZ71 1219 aa13.33□□□□□ -0.28
CCBE1-201ENST00000398179 NCOA1Q15788 1441 aa13.33□□□□□ -0.28
CCBE1-201ENST00000398179 A0A0A6YYH2 397 aa13.33□□□□□ -0.28
CCBE1-201ENST00000398179 A6NJ64 397 aa13.33□□□□□ -0.28
CCBE1-201ENST00000398179 ATP5J2-PTCD1G3V325 749 aa13.33□□□□□ -0.28
CCBE1-201ENST00000398179 IFRD1O00458 451 aaPredicted RBP13.33□□□□□ -0.28
CCBE1-201ENST00000398179 MTX2O75431 263 aa13.33□□□□□ -0.28
CCBE1-201ENST00000398179 CASP14P31944 242 aa13.33□□□□□ -0.28
CCBE1-201ENST00000398179 HARS2P49590 506 aaKnown RBP13.33□□□□□ -0.28
CCBE1-201ENST00000398179 PPP2R2AP63151 447 aa13.33□□□□□ -0.28
CCBE1-201ENST00000398179 GRIK3Q13003 919 aa13.33□□□□□ -0.28
CCBE1-201ENST00000398179 EPS8L3Q8TE67 593 aaKnown RBP13.33□□□□□ -0.28
CCBE1-201ENST00000398179 E2F7Q96AV8 911 aa13.33□□□□□ -0.28
CCBE1-201ENST00000398179 CEP95Q96GE4 821 aa13.33□□□□□ -0.28
CCBE1-201ENST00000398179 TMEM206Q9H813 350 aa13.33□□□□□ -0.28
CCBE1-201ENST00000398179 CABP5Q9NP86 173 aa13.33□□□□□ -0.28
CCBE1-201ENST00000398179 AMACRQ9UHK6 382 aa13.33□□□□□ -0.28
CCBE1-201ENST00000398179 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.33□□□□□ -0.28
CCBE1-201ENST00000398179 ATP2B4P23634 1241 aa13.32□□□□□ -0.28
CCBE1-201ENST00000398179 ITIH4Q14624 930 aa13.32□□□□□ -0.28
CCBE1-201ENST00000398179 C4orf22Q6V702 233 aa13.32□□□□□ -0.28
CCBE1-201ENST00000398179 MARK2Q7KZI7 788 aaKnown RBP13.32□□□□□ -0.28
CCBE1-201ENST00000398179 PLEKHM2Q8IWE5 1019 aa13.32□□□□□ -0.28
CCBE1-201ENST00000398179 GALNT4Q8N4A0 578 aa13.32□□□□□ -0.28
CCBE1-201ENST00000398179 GAL3ST3Q96A11 431 aa13.32□□□□□ -0.28
CCBE1-201ENST00000398179 UROC1Q96N76 676 aa13.32□□□□□ -0.28
CCBE1-201ENST00000398179 SEMA3GQ9NS98 782 aa13.32□□□□□ -0.28
CCBE1-201ENST00000398179 DMTF1Q9Y222 760 aa13.32□□□□□ -0.28
CCBE1-201ENST00000398179 PJA2O43164 708 aa13.32□□□□□ -0.28
CCBE1-201ENST00000398179 TNFAIP8O95379 198 aa13.32□□□□□ -0.28
CCBE1-201ENST00000398179 PIK3CBP42338 1070 aa13.32□□□□□ -0.28
CCBE1-201ENST00000398179 ZNF174Q15697 407 aa13.32□□□□□ -0.28
CCBE1-201ENST00000398179 PET117Q6UWS5 81 aa13.32□□□□□ -0.28
CCBE1-201ENST00000398179 GALNTL5Q7Z4T8 443 aa13.32□□□□□ -0.28
CCBE1-201ENST00000398179 TRMT112Q9UI30 125 aaKnown RBP13.32□□□□□ -0.28
CCBE1-201ENST00000398179 TSR3Q9UJK0 312 aaKnown RBP13.32□□□□□ -0.28
CCBE1-201ENST00000398179 PI4KAP2A4QPH2 592 aa13.32□□□□□ -0.28
CCBE1-201ENST00000398179 FAM149AA5PLN7 773 aa13.32□□□□□ -0.28
CCBE1-201ENST00000398179 RORAP35398 523 aa13.32□□□□□ -0.28
CCBE1-201ENST00000398179 PIK3CGP48736 1102 aa13.32□□□□□ -0.28
CCBE1-201ENST00000398179 RIPK1Q13546 671 aa13.32□□□□□ -0.28
CCBE1-201ENST00000398179 LRP8Q14114 963 aa13.32□□□□□ -0.28
CCBE1-201ENST00000398179 LPIN1Q14693 890 aa13.32□□□□□ -0.28
CCBE1-201ENST00000398179 PI4KAP1Q8N8J0 262 aa13.32□□□□□ -0.28
CCBE1-201ENST00000398179 ZNF527Q8NB42 609 aa13.32□□□□□ -0.28
CCBE1-201ENST00000398179 SHCBP1Q8NEM2 672 aa13.32□□□□□ -0.28
CCBE1-201ENST00000398179 URGCPQ8TCY9 931 aa13.32□□□□□ -0.28
CCBE1-201ENST00000398179 DBF4Q9UBU7 674 aaPredicted RBP13.32□□□□□ -0.28
CCBE1-201ENST00000398179 MKLN1Q9UL63 735 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms