RNA–Protein interactions for RNA: ENST00000398030.8

APEX1-202, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APEX1, Length 1,387 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-202ENST00000398030 SETSIPP0DME0 302 aa12.35□□□□□ -0.43
APEX1-202ENST00000398030 MYBL1P10243 752 aa12.35□□□□□ -0.43
APEX1-202ENST00000398030 CLCN1P35523 988 aa12.35□□□□□ -0.43
APEX1-202ENST00000398030 ZNF132P52740 706 aa12.35□□□□□ -0.43
APEX1-202ENST00000398030 KIF5AQ12840 1032 aa12.35□□□□□ -0.43
APEX1-202ENST00000398030 NFE2Q16621 373 aaPredicted RBP12.35□□□□□ -0.43
APEX1-202ENST00000398030 CTXN3Q4LDR2 81 aa12.35□□□□□ -0.43
APEX1-202ENST00000398030 CCDC122Q5T0U0 273 aa12.35□□□□□ -0.43
APEX1-202ENST00000398030 ALKBH5Q6P6C2 394 aaKnown RBP12.35□□□□□ -0.43
APEX1-202ENST00000398030 WDR59Q6PJI9 974 aa12.35□□□□□ -0.43
APEX1-202ENST00000398030 C16orf59Q7L2K0 433 aa12.35□□□□□ -0.43
APEX1-202ENST00000398030 B3GALNT2Q8NCR0 500 aa12.35□□□□□ -0.43
APEX1-202ENST00000398030 MRPL45Q9BRJ2 306 aaKnown RBP12.35□□□□□ -0.43
APEX1-202ENST00000398030 RC3H2Q9HBD1 1191 aaKnown RBP12.35□□□□□ -0.43
APEX1-202ENST00000398030 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.35□□□□□ -0.43
APEX1-202ENST00000398030 PCDH10Q9P2E7 1040 aa12.35□□□□□ -0.43
APEX1-202ENST00000398030 ADAMTS1Q9UHI8 967 aa12.35□□□□□ -0.43
APEX1-202ENST00000398030 STRIP2Q9ULQ0 834 aa12.35□□□□□ -0.43
APEX1-202ENST00000398030 PCDHGC3Q9UN70 934 aa12.35□□□□□ -0.43
APEX1-202ENST00000398030 MRPL42Q9Y6G3 142 aaKnown RBP12.35□□□□□ -0.43
APEX1-202ENST00000398030 M0QYV0 167 aa12.34□□□□□ -0.43
APEX1-202ENST00000398030 RNF225M0QZC1 329 aaPredicted RBP12.34□□□□□ -0.43
APEX1-202ENST00000398030 GABRDO14764 452 aa12.34□□□□□ -0.43
APEX1-202ENST00000398030 SOD2P04179 222 aa12.34□□□□□ -0.43
APEX1-202ENST00000398030 CALB1P05937 261 aa12.34□□□□□ -0.43
APEX1-202ENST00000398030 PDGFRBP09619 1106 aa12.34□□□□□ -0.43
APEX1-202ENST00000398030 H2AFZP0C0S5 128 aa12.34□□□□□ -0.43
APEX1-202ENST00000398030 GZMAP12544 262 aa12.34□□□□□ -0.43
APEX1-202ENST00000398030 CPB1P15086 417 aa12.34□□□□□ -0.43
APEX1-202ENST00000398030 CA8P35219 290 aa12.34□□□□□ -0.43
APEX1-202ENST00000398030 CTNNB1P35222 781 aa12.34□□□□□ -0.43
APEX1-202ENST00000398030 MAGEA1P43355 309 aa12.34□□□□□ -0.43
APEX1-202ENST00000398030 GLUD2P49448 558 aa12.34□□□□□ -0.43
APEX1-202ENST00000398030 BCAT1P54687 386 aa12.34□□□□□ -0.43
APEX1-202ENST00000398030 RAD23BP54727 409 aa12.34□□□□□ -0.43
APEX1-202ENST00000398030 CNGA2Q16280 664 aa12.34□□□□□ -0.43
APEX1-202ENST00000398030 HGSNATQ68CP4 663 aa12.34□□□□□ -0.43
APEX1-202ENST00000398030 ARHGAP17Q68EM7 881 aa12.34□□□□□ -0.43
APEX1-202ENST00000398030 ELMSAN1Q6PJG2 1045 aa12.34□□□□□ -0.43
APEX1-202ENST00000398030 H2AFVQ71UI9 128 aa12.34□□□□□ -0.43
APEX1-202ENST00000398030 ZNF571Q7Z3V5 609 aaPredicted RBP12.34□□□□□ -0.43
APEX1-202ENST00000398030 ACOT1Q86TX2 421 aa12.34□□□□□ -0.43
APEX1-202ENST00000398030 NOP9Q86U38 636 aaKnown RBP12.34□□□□□ -0.43
APEX1-202ENST00000398030 SPATA2LQ8IUW3 424 aaPredicted RBP12.34□□□□□ -0.43
APEX1-202ENST00000398030 GLYCTKQ8IVS8 523 aa12.34□□□□□ -0.43
APEX1-202ENST00000398030 GPR65Q8IYL9 337 aa12.34□□□□□ -0.43
APEX1-202ENST00000398030 CRYBG2Q8N1P7 616 aa12.34□□□□□ -0.43
APEX1-202ENST00000398030 SLC39A11Q8N1S5 342 aa12.34□□□□□ -0.43
APEX1-202ENST00000398030 SLC4A11Q8NBS3 891 aa12.34□□□□□ -0.43
APEX1-202ENST00000398030 C3orf58Q8NDZ4 430 aa12.34□□□□□ -0.43
APEX1-202ENST00000398030 C2orf15Q8WU43 125 aaKnown RBP12.34□□□□□ -0.43
APEX1-202ENST00000398030 ZNF606Q8WXB4 792 aa12.34□□□□□ -0.43
APEX1-202ENST00000398030 ELMO3Q96BJ8 720 aa12.34□□□□□ -0.43
APEX1-202ENST00000398030 ZNF830Q96NB3 372 aaPredicted RBP12.34□□□□□ -0.43
APEX1-202ENST00000398030 CHP1Q99653 195 aa12.34□□□□□ -0.43
APEX1-202ENST00000398030 PAAF1Q9BRP4 392 aa12.34□□□□□ -0.43
APEX1-202ENST00000398030 C11orf84Q9BUA3 381 aaPredicted RBP12.34□□□□□ -0.43
APEX1-202ENST00000398030 HERC2P3Q9BVR0 1158 aa12.34□□□□□ -0.43
APEX1-202ENST00000398030 CWH43Q9H720 699 aa12.34□□□□□ -0.43
APEX1-202ENST00000398030 LCMT1Q9UIC8 334 aa12.34□□□□□ -0.43
APEX1-202ENST00000398030 INTUQ9ULD6 942 aa12.34□□□□□ -0.43
APEX1-202ENST00000398030 PCDHA11Q9Y5I1 949 aa12.34□□□□□ -0.43
APEX1-202ENST00000398030 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.33□□□□□ -0.44
APEX1-202ENST00000398030 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.33□□□□□ -0.44
APEX1-202ENST00000398030 ANKRD62A6NC57 917 aa12.33□□□□□ -0.44
APEX1-202ENST00000398030 RTN2O75298 545 aa12.33□□□□□ -0.44
APEX1-202ENST00000398030 OAZ2O95190 189 aa12.33□□□□□ -0.44
APEX1-202ENST00000398030 RB1P06400 928 aa12.33□□□□□ -0.44
APEX1-202ENST00000398030 FAM200BP0CF97 657 aa12.33□□□□□ -0.44
APEX1-202ENST00000398030 PTPN1P18031 435 aaKnown RBP12.33□□□□□ -0.44
APEX1-202ENST00000398030 FGFR3P22607 806 aa12.33□□□□□ -0.44
APEX1-202ENST00000398030 BRD2P25440 801 aaKnown RBP12.33□□□□□ -0.44
APEX1-202ENST00000398030 EPHB4P54760 987 aa12.33□□□□□ -0.44
APEX1-202ENST00000398030 UBE3AQ05086 875 aa12.33□□□□□ -0.44
APEX1-202ENST00000398030 BST2Q10589 180 aaKnown RBP12.33□□□□□ -0.44
APEX1-202ENST00000398030 GOLGA7BQ2TAP0 167 aa12.33□□□□□ -0.44
APEX1-202ENST00000398030 INTS6LQ5JSJ4 861 aaKnown RBP12.33□□□□□ -0.44
APEX1-202ENST00000398030 VARS2Q5ST30 1063 aaKnown RBP12.33□□□□□ -0.44
APEX1-202ENST00000398030 LIMS2Q7Z4I7 341 aa12.33□□□□□ -0.44
APEX1-202ENST00000398030 DDX53Q86TM3 631 aaKnown RBP12.33□□□□□ -0.44
APEX1-202ENST00000398030 GPIHBP1Q8IV16 184 aa12.33□□□□□ -0.44
APEX1-202ENST00000398030 SP7Q8TDD2 431 aaPredicted RBP12.33□□□□□ -0.44
APEX1-202ENST00000398030 KBTBD7Q8WVZ9 684 aa12.33□□□□□ -0.44
APEX1-202ENST00000398030 RABGGTAQ92696 567 aa12.33□□□□□ -0.44
APEX1-202ENST00000398030 VWCEQ96DN2 955 aa12.33□□□□□ -0.44
APEX1-202ENST00000398030 CYFIP2Q96F07 1278 aa12.33□□□□□ -0.44
APEX1-202ENST00000398030 ELOVL4Q9GZR5 314 aa12.33□□□□□ -0.44
APEX1-202ENST00000398030 SDCBP2Q9H190 292 aa12.33□□□□□ -0.44
APEX1-202ENST00000398030 LHX5Q9H2C1 402 aa12.33□□□□□ -0.44
APEX1-202ENST00000398030 MRPL17Q9NRX2 175 aaKnown RBP12.33□□□□□ -0.44
APEX1-202ENST00000398030 CXXC1Q9P0U4 656 aaPredicted RBP12.33□□□□□ -0.44
APEX1-202ENST00000398030 NOCTQ9UK39 431 aaKnown RBP12.33□□□□□ -0.44
APEX1-202ENST00000398030 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.33□□□□□ -0.44
APEX1-202ENST00000398030 LZTS1Q9Y250 596 aa12.33□□□□□ -0.44
APEX1-202ENST00000398030 TIMM13Q9Y5L4 95 aaPredicted RBP12.33□□□□□ -0.44
APEX1-202ENST00000398030 SCINQ9Y6U3 715 aa12.33□□□□□ -0.44
APEX1-202ENST00000398030 HTTP42858 3142 aa12.33□□□□□ -0.44
APEX1-202ENST00000398030 NT5C1B-RDH14C9J2C7 533 aa12.32□□□□□ -0.44
APEX1-202ENST00000398030 RBAK-RBAKDNI3L0D1 243 aa12.32□□□□□ -0.44
APEX1-202ENST00000398030 I3L4J1 428 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms