RNA–Protein interactions for RNA: ENST00000397428.7

SYNE4-203, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 382 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-203ENST00000397428 CDC25CP30307 473 aa12.9□□□□□ -0.34
SYNE4-203ENST00000397428 NMT1P30419 496 aaKnown RBP12.9□□□□□ -0.34
SYNE4-203ENST00000397428 DDIT3P35638 169 aa12.9□□□□□ -0.34
SYNE4-203ENST00000397428 DHX8Q14562 1220 aaKnown RBP12.9□□□□□ -0.34
SYNE4-203ENST00000397428 MCM6Q14566 821 aa12.9□□□□□ -0.34
SYNE4-203ENST00000397428 VEPH1Q14D04 833 aa12.9□□□□□ -0.34
SYNE4-203ENST00000397428 PTPAQ15257 358 aa12.9□□□□□ -0.34
SYNE4-203ENST00000397428 MGAT5BQ3V5L5 792 aa12.9□□□□□ -0.34
SYNE4-203ENST00000397428 ZC2HC1CQ53FD0 456 aaPredicted RBP12.9□□□□□ -0.34
SYNE4-203ENST00000397428 PRR23CQ6ZRP0 262 aa12.9□□□□□ -0.34
SYNE4-203ENST00000397428 METTL23Q86XA0 190 aa12.9□□□□□ -0.34
SYNE4-203ENST00000397428 CMTM8Q8IZV2 173 aa12.9□□□□□ -0.34
SYNE4-203ENST00000397428 SPPL2BQ8TCT7 592 aa12.9□□□□□ -0.34
SYNE4-203ENST00000397428 RAD54LQ92698 747 aa12.9□□□□□ -0.34
SYNE4-203ENST00000397428 STRA6Q9BX79 667 aa12.9□□□□□ -0.34
SYNE4-203ENST00000397428 ANK1P16157 1881 aa12.9□□□□□ -0.34
SYNE4-203ENST00000397428 NUP210Q8TEM1 1887 aaPredicted RBP12.9□□□□□ -0.34
SYNE4-203ENST00000397428 OTOL1A6NHN0 477 aaPredicted RBP12.89□□□□□ -0.35
SYNE4-203ENST00000397428 KPNA7A9QM74 516 aa12.89□□□□□ -0.35
SYNE4-203ENST00000397428 K7ENM7 598 aa12.89□□□□□ -0.35
SYNE4-203ENST00000397428 TRDMT1O14717 391 aaKnown RBP12.89□□□□□ -0.35
SYNE4-203ENST00000397428 TM4SF5O14894 197 aa12.89□□□□□ -0.35
SYNE4-203ENST00000397428 LONP1P36776 959 aaKnown RBP12.89□□□□□ -0.35
SYNE4-203ENST00000397428 MCM2P49736 904 aa12.89□□□□□ -0.35
SYNE4-203ENST00000397428 NLRP12P59046 1061 aa12.89□□□□□ -0.35
SYNE4-203ENST00000397428 CYP4F8P98187 520 aa12.89□□□□□ -0.35
SYNE4-203ENST00000397428 RUNX3Q13761 415 aa12.89□□□□□ -0.35
SYNE4-203ENST00000397428 TMEM196Q5HYL7 178 aa12.89□□□□□ -0.35
SYNE4-203ENST00000397428 WSCD1Q658N2 575 aa12.89□□□□□ -0.35
SYNE4-203ENST00000397428 HEATR6Q6AI08 1181 aaKnown RBP12.89□□□□□ -0.35
SYNE4-203ENST00000397428 ADALQ6DHV7 355 aa12.89□□□□□ -0.35
SYNE4-203ENST00000397428 ZNF720Q7Z2F6 126 aa12.89□□□□□ -0.35
SYNE4-203ENST00000397428 FAM200AQ8TCP9 573 aa12.89□□□□□ -0.35
SYNE4-203ENST00000397428 GIPC2Q8TF65 315 aa12.89□□□□□ -0.35
SYNE4-203ENST00000397428 CHFRQ96EP1 664 aa12.89□□□□□ -0.35
SYNE4-203ENST00000397428 LOXL4Q96JB6 756 aa12.89□□□□□ -0.35
SYNE4-203ENST00000397428 TMX3Q96JJ7 454 aa12.89□□□□□ -0.35
SYNE4-203ENST00000397428 SEPT5Q99719 369 aaPredicted RBP12.89□□□□□ -0.35
SYNE4-203ENST00000397428 AGO2Q9UKV8 859 aaKnown RBP12.89□□□□□ -0.35
SYNE4-203ENST00000397428 SCN1AP35498 2009 aa12.88□□□□□ -0.35
SYNE4-203ENST00000397428 TISP43B9A030 160 aa12.88□□□□□ -0.35
SYNE4-203ENST00000397428 H3BQV1 296 aa12.88□□□□□ -0.35
SYNE4-203ENST00000397428 EXTL3O43909 919 aa12.88□□□□□ -0.35
SYNE4-203ENST00000397428 GDF9O60383 454 aa12.88□□□□□ -0.35
SYNE4-203ENST00000397428 ATG13O75143 517 aa12.88□□□□□ -0.35
SYNE4-203ENST00000397428 PPP1R37O75864 691 aa12.88□□□□□ -0.35
SYNE4-203ENST00000397428 KRT37O76014 449 aa12.88□□□□□ -0.35
SYNE4-203ENST00000397428 PLCG1P19174 1290 aa12.88□□□□□ -0.35
SYNE4-203ENST00000397428 GJB2P29033 226 aa12.88□□□□□ -0.35
SYNE4-203ENST00000397428 ADSSP30520 456 aa12.88□□□□□ -0.35
SYNE4-203ENST00000397428 RAP1GAPP47736 663 aa12.88□□□□□ -0.35
SYNE4-203ENST00000397428 TAF6P49848 677 aa12.88□□□□□ -0.35
SYNE4-203ENST00000397428 CDR1P51861 262 aa12.88□□□□□ -0.35
SYNE4-203ENST00000397428 GRIN1Q05586 938 aa12.88□□□□□ -0.35
SYNE4-203ENST00000397428 KARSQ15046 597 aaKnown RBP12.88□□□□□ -0.35
SYNE4-203ENST00000397428 RABEP1Q15276 862 aa12.88□□□□□ -0.35
SYNE4-203ENST00000397428 C8orf34Q49A92 452 aa12.88□□□□□ -0.35
SYNE4-203ENST00000397428 PPM1JQ5JR12 505 aa12.88□□□□□ -0.35
SYNE4-203ENST00000397428 FSTL4Q6MZW2 842 aa12.88□□□□□ -0.35
SYNE4-203ENST00000397428 PKN3Q6P5Z2 889 aa12.88□□□□□ -0.35
SYNE4-203ENST00000397428 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.88□□□□□ -0.35
SYNE4-203ENST00000397428 MON1AQ86VX9 555 aa12.88□□□□□ -0.35
SYNE4-203ENST00000397428 NT5DC4Q86YG4 428 aa12.88□□□□□ -0.35
SYNE4-203ENST00000397428 DCP1BQ8IZD4 617 aaKnown RBP12.88□□□□□ -0.35
SYNE4-203ENST00000397428 GAB3Q8WWW8 586 aa12.88□□□□□ -0.35
SYNE4-203ENST00000397428 USP13Q92995 863 aaPredicted RBP12.88□□□□□ -0.35
SYNE4-203ENST00000397428 ZC3H10Q96K80 434 aaKnown RBP12.88□□□□□ -0.35
SYNE4-203ENST00000397428 PYM1Q9BRP8 204 aaKnown RBP12.88□□□□□ -0.35
SYNE4-203ENST00000397428 SMG9Q9H0W8 520 aaKnown RBP12.88□□□□□ -0.35
SYNE4-203ENST00000397428 HPS4Q9NQG7 708 aa12.88□□□□□ -0.35
SYNE4-203ENST00000397428 TDP1Q9NUW8 608 aa12.88□□□□□ -0.35
SYNE4-203ENST00000397428 KIF26AQ9ULI4 1882 aaPredicted RBP12.87□□□□□ -0.35
SYNE4-203ENST00000397428 IL18RAPO95256 599 aa12.87□□□□□ -0.35
SYNE4-203ENST00000397428 KRT18P05783 430 aaKnown RBP12.87□□□□□ -0.35
SYNE4-203ENST00000397428 ZNF806P0C7X5 589 aa12.87□□□□□ -0.35
SYNE4-203ENST00000397428 DDX6P26196 483 aaKnown RBP eCLIP12.87□□□□□ -0.35
SYNE4-203ENST00000397428 GALK1P51570 392 aa12.87□□□□□ -0.35
SYNE4-203ENST00000397428 LIMK1P53667 647 aa12.87□□□□□ -0.35
SYNE4-203ENST00000397428 POSTNQ15063 836 aa12.87□□□□□ -0.35
SYNE4-203ENST00000397428 TAF12Q16514 161 aa12.87□□□□□ -0.35
SYNE4-203ENST00000397428 CEP68Q76N32 757 aa12.87□□□□□ -0.35
SYNE4-203ENST00000397428 EFCAB13Q8IY85 973 aa12.87□□□□□ -0.35
SYNE4-203ENST00000397428 MAB21L3Q8N8X9 362 aa12.87□□□□□ -0.35
SYNE4-203ENST00000397428 DDX1Q92499 740 aaKnown RBP12.87□□□□□ -0.35
SYNE4-203ENST00000397428 MYRFLQ96LU7 910 aa12.87□□□□□ -0.35
SYNE4-203ENST00000397428 IKZF4Q9H2S9 585 aa12.87□□□□□ -0.35
SYNE4-203ENST00000397428 ZHX3Q9H4I2 956 aa12.87□□□□□ -0.35
SYNE4-203ENST00000397428 FBRSL1Q9HCM7 1045 aaKnown RBP12.87□□□□□ -0.35
SYNE4-203ENST00000397428 TMLHEQ9NVH6 421 aa12.87□□□□□ -0.35
SYNE4-203ENST00000397428 CCL26Q9Y258 94 aa12.87□□□□□ -0.35
SYNE4-203ENST00000397428 PCDHB5Q9Y5E4 795 aa12.87□□□□□ -0.35
SYNE4-203ENST00000397428 DENND4CQ5VZ89 1909 aa12.87□□□□□ -0.35
SYNE4-203ENST00000397428 TSC2P49815 1807 aa12.87□□□□□ -0.35
SYNE4-203ENST00000397428 AXIN1O15169 862 aa12.86□□□□□ -0.35
SYNE4-203ENST00000397428 AKAP3O75969 853 aa12.86□□□□□ -0.35
SYNE4-203ENST00000397428 BMP15O95972 392 aa12.86□□□□□ -0.35
SYNE4-203ENST00000397428 AVPR1AP37288 418 aa12.86□□□□□ -0.35
SYNE4-203ENST00000397428 GRSF1Q12849 480 aaKnown RBP eCLIP12.86□□□□□ -0.35
SYNE4-203ENST00000397428 ZNF268Q14587 947 aaPredicted RBP12.86□□□□□ -0.35
SYNE4-203ENST00000397428 NFE2Q16621 373 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms