RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 ARHGAP17Q68EM7 881 aa20.22■□□□□ 0.83
TSPAN4-204ENST00000397404 SCARA3Q6AZY7 606 aa20.22■□□□□ 0.83
TSPAN4-204ENST00000397404 LCLAT1Q6UWP7 414 aa20.22■□□□□ 0.83
TSPAN4-204ENST00000397404 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.22■□□□□ 0.83
TSPAN4-204ENST00000397404 PHF13Q86YI8 300 aaPredicted RBP20.22■□□□□ 0.83
TSPAN4-204ENST00000397404 PDCL2Q8N4E4 241 aa20.22■□□□□ 0.83
TSPAN4-204ENST00000397404 HEXIM2Q96MH2 286 aaKnown RBP20.22■□□□□ 0.83
TSPAN4-204ENST00000397404 COLEC11Q9BWP8 271 aa20.22■□□□□ 0.83
TSPAN4-204ENST00000397404 LACRTQ9GZZ8 138 aa20.22■□□□□ 0.83
TSPAN4-204ENST00000397404 L1RE1Q9UN81 338 aa20.22■□□□□ 0.83
TSPAN4-204ENST00000397404 SCN5AQ14524 2016 aa20.21■□□□□ 0.83
TSPAN4-204ENST00000397404 TET1Q8NFU7 2136 aa20.21■□□□□ 0.83
TSPAN4-204ENST00000397404 CASTOR2A6NHX0 329 aa20.21■□□□□ 0.83
TSPAN4-204ENST00000397404 SYN3O14994 580 aa20.21■□□□□ 0.83
TSPAN4-204ENST00000397404 SPTLC1O15269 473 aa20.21■□□□□ 0.83
TSPAN4-204ENST00000397404 ALDH2P05091 517 aa20.21■□□□□ 0.83
TSPAN4-204ENST00000397404 RAP1GAPP47736 663 aa20.21■□□□□ 0.83
TSPAN4-204ENST00000397404 GNG11P61952 73 aa20.21■□□□□ 0.83
TSPAN4-204ENST00000397404 NOMO3P69849 1222 aa20.21■□□□□ 0.83
TSPAN4-204ENST00000397404 MAPRE1Q15691 268 aaKnown RBP20.21■□□□□ 0.83
TSPAN4-204ENST00000397404 SYCE1Q8N0S2 351 aa20.21■□□□□ 0.83
TSPAN4-204ENST00000397404 KBTBD7Q8WVZ9 684 aa20.21■□□□□ 0.83
TSPAN4-204ENST00000397404 TOP1MTQ969P6 601 aa20.21■□□□□ 0.83
TSPAN4-204ENST00000397404 ELMO3Q96BJ8 720 aa20.21■□□□□ 0.83
TSPAN4-204ENST00000397404 ELOVL4Q9GZR5 314 aa20.21■□□□□ 0.83
TSPAN4-204ENST00000397404 CYLDQ9NQC7 956 aa20.21■□□□□ 0.83
TSPAN4-204ENST00000397404 HESX1Q9UBX0 185 aa20.21■□□□□ 0.83
TSPAN4-204ENST00000397404 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.21■□□□□ 0.83
TSPAN4-204ENST00000397404 FGFR1P11362 822 aa20.2■□□□□ 0.82
TSPAN4-204ENST00000397404 EN2P19622 333 aaPredicted RBP20.2■□□□□ 0.82
TSPAN4-204ENST00000397404 AFF1P51825 1210 aaKnown RBP20.2■□□□□ 0.82
TSPAN4-204ENST00000397404 SLC8A3P57103 927 aa20.2■□□□□ 0.82
TSPAN4-204ENST00000397404 ZNF394Q53GI3 561 aa20.2■□□□□ 0.82
TSPAN4-204ENST00000397404 PSRC1Q6PGN9 363 aaPredicted RBP20.2■□□□□ 0.82
TSPAN4-204ENST00000397404 PCDHB18PQ96TA0 734 aa20.2■□□□□ 0.82
TSPAN4-204ENST00000397404 MRPL45Q9BRJ2 306 aaKnown RBP20.2■□□□□ 0.82
TSPAN4-204ENST00000397404 MRPL47Q9HD33 250 aaKnown RBP20.2■□□□□ 0.82
TSPAN4-204ENST00000397404 WDR35Q9P2L0 1181 aa20.2■□□□□ 0.82
TSPAN4-204ENST00000397404 CDH9Q9ULB4 789 aa20.2■□□□□ 0.82
TSPAN4-204ENST00000397404 SCINQ9Y6U3 715 aa20.2■□□□□ 0.82
TSPAN4-204ENST00000397404 O00370 1275 aa20.19■□□□□ 0.82
TSPAN4-204ENST00000397404 MTA2O94776 668 aa20.19■□□□□ 0.82
TSPAN4-204ENST00000397404 GSCP56915 257 aaPredicted RBP20.19■□□□□ 0.82
TSPAN4-204ENST00000397404 TAP1Q03518 808 aa20.19■□□□□ 0.82
TSPAN4-204ENST00000397404 THEM5Q8N1Q8 247 aa20.19■□□□□ 0.82
TSPAN4-204ENST00000397404 STK32AQ8WU08 396 aa20.19■□□□□ 0.82
TSPAN4-204ENST00000397404 ACBD6Q9BR61 282 aa20.19■□□□□ 0.82
TSPAN4-204ENST00000397404 PCDHB8Q9UN66 801 aa20.19■□□□□ 0.82
TSPAN4-204ENST00000397404 JRKLQ9Y4A0 524 aa20.19■□□□□ 0.82
TSPAN4-204ENST00000397404 PCDHGC5Q9Y5F6 944 aa20.19■□□□□ 0.82
TSPAN4-204ENST00000397404 RCCD1A6NED2 376 aa20.18■□□□□ 0.82
TSPAN4-204ENST00000397404 DGKIO75912 1065 aa20.18■□□□□ 0.82
TSPAN4-204ENST00000397404 CYP1A2P05177 515 aa20.18■□□□□ 0.82
TSPAN4-204ENST00000397404 CSF2RAP15509 400 aa20.18■□□□□ 0.82
TSPAN4-204ENST00000397404 BRD2P25440 801 aaKnown RBP20.18■□□□□ 0.82
TSPAN4-204ENST00000397404 CASQ1P31415 396 aa20.18■□□□□ 0.82
TSPAN4-204ENST00000397404 GPIHBP1Q8IV16 184 aa20.18■□□□□ 0.82
TSPAN4-204ENST00000397404 MCOLN2Q8IZK6 566 aa20.18■□□□□ 0.82
TSPAN4-204ENST00000397404 CYFIP2Q96F07 1278 aa20.18■□□□□ 0.82
TSPAN4-204ENST00000397404 ACP6Q9NPH0 428 aa20.18■□□□□ 0.82
TSPAN4-204ENST00000397404 CTAGE9A4FU28 777 aa20.18■□□□□ 0.82
TSPAN4-204ENST00000397404 MMP8P22894 467 aa20.18■□□□□ 0.82
TSPAN4-204ENST00000397404 NAP1L1P55209 391 aaKnown RBP20.18■□□□□ 0.82
TSPAN4-204ENST00000397404 FPGSQ05932 587 aa20.18■□□□□ 0.82
TSPAN4-204ENST00000397404 TIGD5Q53EQ6 642 aa20.18■□□□□ 0.82
TSPAN4-204ENST00000397404 ZNF569Q5MCW4 686 aa20.18■□□□□ 0.82
TSPAN4-204ENST00000397404 MON1BQ7L1V2 547 aa20.18■□□□□ 0.82
TSPAN4-204ENST00000397404 B3GALNT2Q8NCR0 500 aa20.18■□□□□ 0.82
TSPAN4-204ENST00000397404 TWNKQ96RR1 684 aa20.18■□□□□ 0.82
TSPAN4-204ENST00000397404 MTIF3Q9H2K0 278 aaKnown RBP20.18■□□□□ 0.82
TSPAN4-204ENST00000397404 ADAM22Q9P0K1 906 aa20.18■□□□□ 0.82
TSPAN4-204ENST00000397404 ADAM28Q9UKQ2 775 aa20.18■□□□□ 0.82
TSPAN4-204ENST00000397404 FAN1Q9Y2M0 1017 aa20.18■□□□□ 0.82
TSPAN4-204ENST00000397404 SF3B1O75533 1304 aaKnown RBP eCLIP20.17■□□□□ 0.82
TSPAN4-204ENST00000397404 MACROD2A1Z1Q3 448 aa20.17■□□□□ 0.82
TSPAN4-204ENST00000397404 TBKBP1A7MCY6 615 aa20.17■□□□□ 0.82
TSPAN4-204ENST00000397404 TADA2AO75478 443 aa20.17■□□□□ 0.82
TSPAN4-204ENST00000397404 DDHD2O94830 711 aa20.17■□□□□ 0.82
TSPAN4-204ENST00000397404 IBSPP21815 317 aaPredicted RBP20.17■□□□□ 0.82
TSPAN4-204ENST00000397404 OR1G1P47890 313 aa20.17■□□□□ 0.82
TSPAN4-204ENST00000397404 BCAT1P54687 386 aa20.17■□□□□ 0.82
TSPAN4-204ENST00000397404 NAA35Q5VZE5 725 aa20.17■□□□□ 0.82
TSPAN4-204ENST00000397404 WSCD1Q658N2 575 aa20.17■□□□□ 0.82
TSPAN4-204ENST00000397404 PALB2Q86YC2 1186 aa20.17■□□□□ 0.82
TSPAN4-204ENST00000397404 CMTR2Q8IYT2 770 aaKnown RBP20.17■□□□□ 0.82
TSPAN4-204ENST00000397404 ANKRD52Q8NB46 1076 aa20.17■□□□□ 0.82
TSPAN4-204ENST00000397404 C3orf58Q8NDZ4 430 aa20.17■□□□□ 0.82
TSPAN4-204ENST00000397404 TFAP2BQ92481 460 aa20.17■□□□□ 0.82
TSPAN4-204ENST00000397404 HNRNPABQ99729 332 aaKnown RBP20.17■□□□□ 0.82
TSPAN4-204ENST00000397404 NRDE2Q9H7Z3 1164 aa20.17■□□□□ 0.82
TSPAN4-204ENST00000397404 RRAGDQ9NQL2 400 aaPredicted RBP20.17■□□□□ 0.82
TSPAN4-204ENST00000397404 DDX43Q9NXZ2 648 aaKnown RBP20.17■□□□□ 0.82
TSPAN4-204ENST00000397404 TSPAN16Q9UKR8 245 aa20.17■□□□□ 0.82
TSPAN4-204ENST00000397404 TMCO5BA8MYB1 307 aa20.16■□□□□ 0.82
TSPAN4-204ENST00000397404 ALDH7A1P49419 539 aaKnown RBP20.16■□□□□ 0.82
TSPAN4-204ENST00000397404 WDR5P61964 334 aaKnown RBP20.16■□□□□ 0.82
TSPAN4-204ENST00000397404 PLCB3Q01970 1234 aa20.16■□□□□ 0.82
TSPAN4-204ENST00000397404 SMARCB1Q12824 385 aa20.16■□□□□ 0.82
TSPAN4-204ENST00000397404 ACOT1Q86TX2 421 aa20.16■□□□□ 0.82
TSPAN4-204ENST00000397404 ERICH1Q86X53 443 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms