RNA–Protein interactions for RNA: ENST00000397386.7

LMCD1-202, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-202ENST00000397386 ZSWIM1Q9BR11 485 aa13.48□□□□□ -0.25
LMCD1-202ENST00000397386 PDCL3Q9H2J4 239 aa13.48□□□□□ -0.25
LMCD1-202ENST00000397386 SEPT11Q9NVA2 429 aaKnown RBP13.48□□□□□ -0.25
LMCD1-202ENST00000397386 HMGXB4Q9UGU5 601 aa13.48□□□□□ -0.25
LMCD1-202ENST00000397386 PUF60Q9UHX1 559 aaKnown RBP13.48□□□□□ -0.25
LMCD1-202ENST00000397386 ADAM28Q9UKQ2 775 aa13.48□□□□□ -0.25
LMCD1-202ENST00000397386 PCDHB8Q9UN66 801 aa13.48□□□□□ -0.25
LMCD1-202ENST00000397386 FAN1Q9Y2M0 1017 aa13.48□□□□□ -0.25
LMCD1-202ENST00000397386 ANKRD62A6NC57 917 aa13.47□□□□□ -0.25
LMCD1-202ENST00000397386 BTNL10A8MVZ5 291 aa13.47□□□□□ -0.25
LMCD1-202ENST00000397386 O00370 1275 aa13.47□□□□□ -0.25
LMCD1-202ENST00000397386 NRP1O14786 923 aa13.47□□□□□ -0.25
LMCD1-202ENST00000397386 SYN3O14994 580 aa13.47□□□□□ -0.25
LMCD1-202ENST00000397386 GALTP07902 379 aa13.47□□□□□ -0.25
LMCD1-202ENST00000397386 CD19P15391 556 aa13.47□□□□□ -0.25
LMCD1-202ENST00000397386 IGFBP6P24592 240 aaPredicted RBP13.47□□□□□ -0.25
LMCD1-202ENST00000397386 BRD2P25440 801 aaKnown RBP13.47□□□□□ -0.25
LMCD1-202ENST00000397386 PCSK1P29120 753 aa13.47□□□□□ -0.25
LMCD1-202ENST00000397386 ARHGAP25P42331 645 aa13.47□□□□□ -0.25
LMCD1-202ENST00000397386 ALDH7A1P49419 539 aaKnown RBP13.47□□□□□ -0.25
LMCD1-202ENST00000397386 DEFB103AP81534 67 aa13.47□□□□□ -0.25
LMCD1-202ENST00000397386 CENPCQ03188 943 aa13.47□□□□□ -0.25
LMCD1-202ENST00000397386 TMEM240Q5SV17 173 aa13.47□□□□□ -0.25
LMCD1-202ENST00000397386 ARHGAP17Q68EM7 881 aa13.47□□□□□ -0.25
LMCD1-202ENST00000397386 OTOP2Q7RTS6 562 aa13.47□□□□□ -0.25
LMCD1-202ENST00000397386 PALB2Q86YC2 1186 aa13.47□□□□□ -0.25
LMCD1-202ENST00000397386 C17orf53Q8N3J3 647 aaPredicted RBP13.47□□□□□ -0.25
LMCD1-202ENST00000397386 PHOSPHO2Q8TCD6 241 aa13.47□□□□□ -0.25
LMCD1-202ENST00000397386 HERVK_113Q902F9 699 aa13.47□□□□□ -0.25
LMCD1-202ENST00000397386 RABGGTAQ92696 567 aa13.47□□□□□ -0.25
LMCD1-202ENST00000397386 VCPIP1Q96JH7 1222 aa13.47□□□□□ -0.25
LMCD1-202ENST00000397386 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.47□□□□□ -0.25
LMCD1-202ENST00000397386 CEP83Q9Y592 693 aa13.47□□□□□ -0.25
LMCD1-202ENST00000397386 KIF2AO00139 706 aaPredicted RBP13.46□□□□□ -0.25
LMCD1-202ENST00000397386 TADA2AO75478 443 aa13.46□□□□□ -0.25
LMCD1-202ENST00000397386 ITGB1P05556 798 aa13.46□□□□□ -0.25
LMCD1-202ENST00000397386 TMEM253P0C7T8 217 aa13.46□□□□□ -0.25
LMCD1-202ENST00000397386 BRCC3P46736 316 aa13.46□□□□□ -0.25
LMCD1-202ENST00000397386 SLC11A1P49279 550 aa13.46□□□□□ -0.25
LMCD1-202ENST00000397386 NOMO3P69849 1222 aa13.46□□□□□ -0.25
LMCD1-202ENST00000397386 HTRA4P83105 476 aaPredicted RBP13.46□□□□□ -0.25
LMCD1-202ENST00000397386 ACAD10Q6JQN1 1059 aa13.46□□□□□ -0.25
LMCD1-202ENST00000397386 LCLAT1Q6UWP7 414 aa13.46□□□□□ -0.25
LMCD1-202ENST00000397386 NYAP1Q6ZVC0 841 aa13.46□□□□□ -0.25
LMCD1-202ENST00000397386 ACOT1Q86TX2 421 aa13.46□□□□□ -0.25
LMCD1-202ENST00000397386 RNF10Q8N5U6 811 aaKnown RBP13.46□□□□□ -0.25
LMCD1-202ENST00000397386 TMEM35BQ8NCS4 154 aa13.46□□□□□ -0.25
LMCD1-202ENST00000397386 TRIM11Q96F44 468 aa13.46□□□□□ -0.25
LMCD1-202ENST00000397386 CALR3Q96L12 384 aaKnown RBP13.46□□□□□ -0.25
LMCD1-202ENST00000397386 LBHD1Q9BQE6 289 aaPredicted RBP13.46□□□□□ -0.25
LMCD1-202ENST00000397386 ACBD6Q9BR61 282 aa13.46□□□□□ -0.25
LMCD1-202ENST00000397386 LACRTQ9GZZ8 138 aa13.46□□□□□ -0.25
LMCD1-202ENST00000397386 MTIF3Q9H2K0 278 aaKnown RBP13.46□□□□□ -0.25
LMCD1-202ENST00000397386 CWH43Q9H720 699 aa13.46□□□□□ -0.25
LMCD1-202ENST00000397386 MYO1AQ9UBC5 1043 aa13.46□□□□□ -0.25
LMCD1-202ENST00000397386 PRG3Q9Y2Y8 225 aaPredicted RBP13.46□□□□□ -0.25
LMCD1-202ENST00000397386 NME7Q9Y5B8 376 aa13.46□□□□□ -0.25
LMCD1-202ENST00000397386 COL4A6Q14031 1691 aa13.46□□□□□ -0.25
LMCD1-202ENST00000397386 SF3B1O75533 1304 aaKnown RBP eCLIP13.46□□□□□ -0.25
LMCD1-202ENST00000397386 A0A0A6YYK5 440 aaPredicted RBP13.45□□□□□ -0.26
LMCD1-202ENST00000397386 RCCD1A6NED2 376 aa13.45□□□□□ -0.26
LMCD1-202ENST00000397386 OAZ2O95190 189 aa13.45□□□□□ -0.26
LMCD1-202ENST00000397386 GJB5O95377 273 aa13.45□□□□□ -0.26
LMCD1-202ENST00000397386 CALCAP01258 141 aa13.45□□□□□ -0.26
LMCD1-202ENST00000397386 FTLP02792 175 aaPredicted RBP13.45□□□□□ -0.26
LMCD1-202ENST00000397386 MYBL1P10243 752 aa13.45□□□□□ -0.26
LMCD1-202ENST00000397386 LMO2P25791 158 aa13.45□□□□□ -0.26
LMCD1-202ENST00000397386 NSFP46459 744 aaKnown RBP13.45□□□□□ -0.26
LMCD1-202ENST00000397386 GALCP54803 685 aa13.45□□□□□ -0.26
LMCD1-202ENST00000397386 BCAR1P56945 870 aa13.45□□□□□ -0.26
LMCD1-202ENST00000397386 TCEAL1Q15170 157 aa13.45□□□□□ -0.26
LMCD1-202ENST00000397386 PTPN14Q15678 1187 aa13.45□□□□□ -0.26
LMCD1-202ENST00000397386 PAN2Q504Q3 1202 aaKnown RBP13.45□□□□□ -0.26
LMCD1-202ENST00000397386 PHF13Q86YI8 300 aaPredicted RBP13.45□□□□□ -0.26
LMCD1-202ENST00000397386 THEM5Q8N1Q8 247 aa13.45□□□□□ -0.26
LMCD1-202ENST00000397386 B3GALNT2Q8NCR0 500 aa13.45□□□□□ -0.26
LMCD1-202ENST00000397386 CYFIP2Q96F07 1278 aa13.45□□□□□ -0.26
LMCD1-202ENST00000397386 SLC9A7Q96T83 725 aa13.45□□□□□ -0.26
LMCD1-202ENST00000397386 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.45□□□□□ -0.26
LMCD1-202ENST00000397386 OXCT2Q9BYC2 517 aaPredicted RBP13.45□□□□□ -0.26
LMCD1-202ENST00000397386 LZTFL1Q9NQ48 299 aa13.45□□□□□ -0.26
LMCD1-202ENST00000397386 DDX43Q9NXZ2 648 aaKnown RBP13.45□□□□□ -0.26
LMCD1-202ENST00000397386 TAS2R14Q9NYV8 317 aa13.45□□□□□ -0.26
LMCD1-202ENST00000397386 CDH9Q9ULB4 789 aa13.45□□□□□ -0.26
LMCD1-202ENST00000397386 ZBBXA8MT70 800 aa13.44□□□□□ -0.26
LMCD1-202ENST00000397386 EFEMP2O95967 443 aa13.44□□□□□ -0.26
LMCD1-202ENST00000397386 PDGFRBP09619 1106 aa13.44□□□□□ -0.26
LMCD1-202ENST00000397386 PTPN1P18031 435 aaKnown RBP13.44□□□□□ -0.26
LMCD1-202ENST00000397386 LAG3P18627 525 aa13.44□□□□□ -0.26
LMCD1-202ENST00000397386 EPHB4P54760 987 aa13.44□□□□□ -0.26
LMCD1-202ENST00000397386 YWHAHQ04917 246 aaPredicted RBP13.44□□□□□ -0.26
LMCD1-202ENST00000397386 BTG3Q14201 252 aaPredicted RBP13.44□□□□□ -0.26
LMCD1-202ENST00000397386 MAPRE1Q15691 268 aaKnown RBP13.44□□□□□ -0.26
LMCD1-202ENST00000397386 OVOS1Q6IE37 1185 aa13.44□□□□□ -0.26
LMCD1-202ENST00000397386 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.44□□□□□ -0.26
LMCD1-202ENST00000397386 OSTM1Q86WC4 334 aa13.44□□□□□ -0.26
LMCD1-202ENST00000397386 TNS4Q8IZW8 715 aa13.44□□□□□ -0.26
LMCD1-202ENST00000397386 HASPINQ8TF76 798 aa13.44□□□□□ -0.26
LMCD1-202ENST00000397386 CTNNBL1Q8WYA6 563 aaPredicted RBP13.44□□□□□ -0.26
LMCD1-202ENST00000397386 DPF3Q92784 378 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms