RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 ALG13Q9NP73 1137 aaKnown RBP9.66□□□□□ -0.86
CAPN3-206ENST00000397163 STK32BQ9NY57 414 aa9.66□□□□□ -0.86
CAPN3-206ENST00000397163 PSMC3IPQ9P2W1 217 aaPredicted RBP9.66□□□□□ -0.86
CAPN3-206ENST00000397163 DNPEPQ9ULA0 475 aa9.66□□□□□ -0.86
CAPN3-206ENST00000397163 MYH11P35749 1972 aa9.66□□□□□ -0.86
CAPN3-206ENST00000397163 A6NJR5 290 aa9.65□□□□□ -0.86
CAPN3-206ENST00000397163 GOLGA8SH3BPF8 625 aa9.65□□□□□ -0.86
CAPN3-206ENST00000397163 GOLGA8MH3BSY2 632 aa9.65□□□□□ -0.86
CAPN3-206ENST00000397163 PSTPIP1O43586 416 aa9.65□□□□□ -0.86
CAPN3-206ENST00000397163 ZWINTO95229 277 aa9.65□□□□□ -0.86
CAPN3-206ENST00000397163 IFNB1P01574 187 aa9.65□□□□□ -0.86
CAPN3-206ENST00000397163 UNGP13051 313 aaPredicted RBP9.65□□□□□ -0.86
CAPN3-206ENST00000397163 YY1P25490 414 aa9.65□□□□□ -0.86
CAPN3-206ENST00000397163 ABCD1P33897 745 aa9.65□□□□□ -0.86
CAPN3-206ENST00000397163 RARRES1P49788 294 aa9.65□□□□□ -0.86
CAPN3-206ENST00000397163 STAT2P52630 851 aa9.65□□□□□ -0.86
CAPN3-206ENST00000397163 NOP14P78316 857 aaKnown RBP9.65□□□□□ -0.86
CAPN3-206ENST00000397163 KPNB1Q14974 876 aaKnown RBP9.65□□□□□ -0.86
CAPN3-206ENST00000397163 PLEKHG4Q58EX7 1191 aa9.65□□□□□ -0.86
CAPN3-206ENST00000397163 LIN9Q5TKA1 542 aa9.65□□□□□ -0.86
CAPN3-206ENST00000397163 CENPUQ71F23 418 aa9.65□□□□□ -0.86
CAPN3-206ENST00000397163 PASD1Q8IV76 773 aa9.65□□□□□ -0.86
CAPN3-206ENST00000397163 PPFIBP2Q8ND30 876 aa9.65□□□□□ -0.86
CAPN3-206ENST00000397163 RFWD2Q8NHY2 731 aa9.65□□□□□ -0.86
CAPN3-206ENST00000397163 FAM84AQ96KN4 292 aa9.65□□□□□ -0.86
CAPN3-206ENST00000397163 IWS1Q96ST2 819 aa9.65□□□□□ -0.86
CAPN3-206ENST00000397163 TSPYL2Q9H2G4 693 aaPredicted RBP9.65□□□□□ -0.86
CAPN3-206ENST00000397163 TLE6Q9H808 572 aa9.65□□□□□ -0.86
CAPN3-206ENST00000397163 ARL8BQ9NVJ2 186 aa9.65□□□□□ -0.86
CAPN3-206ENST00000397163 HEY2Q9UBP5 337 aa9.65□□□□□ -0.86
CAPN3-206ENST00000397163 PHF24Q9UPV7 400 aa9.65□□□□□ -0.86
CAPN3-206ENST00000397163 TMEM150BA6NC51 233 aa9.65□□□□□ -0.86
CAPN3-206ENST00000397163 GOLGA8RI6L899 631 aa9.65□□□□□ -0.86
CAPN3-206ENST00000397163 TYROBPO43914 113 aa9.65□□□□□ -0.86
CAPN3-206ENST00000397163 P4HBP07237 508 aaKnown RBP9.65□□□□□ -0.86
CAPN3-206ENST00000397163 FAM200BP0CF97 657 aa9.65□□□□□ -0.86
CAPN3-206ENST00000397163 ADSSP30520 456 aa9.65□□□□□ -0.86
CAPN3-206ENST00000397163 SSTR3P32745 418 aaPredicted RBP9.65□□□□□ -0.86
CAPN3-206ENST00000397163 RTP1P59025 263 aa9.65□□□□□ -0.86
CAPN3-206ENST00000397163 GTF2BQ00403 316 aa9.65□□□□□ -0.86
CAPN3-206ENST00000397163 PLCB3Q01970 1234 aa9.65□□□□□ -0.86
CAPN3-206ENST00000397163 SV2AQ7L0J3 742 aa9.65□□□□□ -0.86
CAPN3-206ENST00000397163 HAUS1Q96CS2 278 aa9.65□□□□□ -0.86
CAPN3-206ENST00000397163 TRAPPC9Q96Q05 1148 aa9.65□□□□□ -0.86
CAPN3-206ENST00000397163 TUBGCP5Q96RT8 1024 aa9.65□□□□□ -0.86
CAPN3-206ENST00000397163 KLF6Q99612 283 aaPredicted RBP9.65□□□□□ -0.86
CAPN3-206ENST00000397163 BTBD10Q9BSF8 475 aa9.65□□□□□ -0.86
CAPN3-206ENST00000397163 TRIM55Q9BYV6 548 aa9.65□□□□□ -0.86
CAPN3-206ENST00000397163 DMAP1Q9NPF5 467 aaPredicted RBP9.65□□□□□ -0.86
CAPN3-206ENST00000397163 ZHX2Q9Y6X8 837 aa9.65□□□□□ -0.86
CAPN3-206ENST00000397163 GSC2O15499 205 aa9.65□□□□□ -0.87
CAPN3-206ENST00000397163 ECE2O60344 883 aa9.65□□□□□ -0.87
CAPN3-206ENST00000397163 PIAS1O75925 651 aa9.65□□□□□ -0.87
CAPN3-206ENST00000397163 PTP4A2Q12974 167 aa9.65□□□□□ -0.87
CAPN3-206ENST00000397163 NFX1Q12986 1120 aaKnown RBP9.65□□□□□ -0.87
CAPN3-206ENST00000397163 ATP13A4Q4VNC1 1196 aa9.65□□□□□ -0.87
CAPN3-206ENST00000397163 ACSBG2Q5FVE4 666 aa9.65□□□□□ -0.87
CAPN3-206ENST00000397163 SPDYAQ5MJ70 313 aa9.65□□□□□ -0.87
CAPN3-206ENST00000397163 FAM102BQ5T8I3 360 aa9.65□□□□□ -0.87
CAPN3-206ENST00000397163 SH3BP5LQ7L8J4 393 aa9.65□□□□□ -0.87
CAPN3-206ENST00000397163 RBM12BQ8IXT5 1001 aaKnown RBP9.65□□□□□ -0.87
CAPN3-206ENST00000397163 KATNAL2Q8IYT4 538 aa9.65□□□□□ -0.87
CAPN3-206ENST00000397163 FLAD1Q8NFF5 587 aa9.65□□□□□ -0.87
CAPN3-206ENST00000397163 EXD1Q8NHP7 514 aa9.65□□□□□ -0.87
CAPN3-206ENST00000397163 NMD3Q96D46 503 aaKnown RBP9.65□□□□□ -0.87
CAPN3-206ENST00000397163 NSL1Q96IY1 281 aa9.65□□□□□ -0.87
CAPN3-206ENST00000397163 KIFC3Q9BVG8 833 aa9.65□□□□□ -0.87
CAPN3-206ENST00000397163 C12orf65Q9H3J6 166 aaKnown RBP9.65□□□□□ -0.87
CAPN3-206ENST00000397163 CYLDQ9NQC7 956 aa9.65□□□□□ -0.87
CAPN3-206ENST00000397163 C1orf112Q9NSG2 853 aa9.65□□□□□ -0.87
CAPN3-206ENST00000397163 SLC24A2Q9UI40 661 aa9.65□□□□□ -0.87
CAPN3-206ENST00000397163 EXOC7Q9UPT5 735 aa9.65□□□□□ -0.87
CAPN3-206ENST00000397163 COQ4Q9Y3A0 265 aa9.65□□□□□ -0.87
CAPN3-206ENST00000397163 NUMBLQ9Y6R0 609 aa9.65□□□□□ -0.87
CAPN3-206ENST00000397163 UMODL1Q5DID0 1318 aa9.64□□□□□ -0.87
CAPN3-206ENST00000397163 SIGLEC16A6NMB1 481 aa9.64□□□□□ -0.87
CAPN3-206ENST00000397163 PPEF1O14829 653 aaPredicted RBP9.64□□□□□ -0.87
CAPN3-206ENST00000397163 LIASO43766 372 aa9.64□□□□□ -0.87
CAPN3-206ENST00000397163 TBX10O75333 385 aa9.64□□□□□ -0.87
CAPN3-206ENST00000397163 BANF1O75531 89 aa9.64□□□□□ -0.87
CAPN3-206ENST00000397163 SETSIPP0DME0 302 aa9.64□□□□□ -0.87
CAPN3-206ENST00000397163 ARFIP2P53365 341 aa9.64□□□□□ -0.87
CAPN3-206ENST00000397163 SLC34A1Q06495 639 aa9.64□□□□□ -0.87
CAPN3-206ENST00000397163 CTC1Q2NKJ3 1217 aa9.64□□□□□ -0.87
CAPN3-206ENST00000397163 LRRC74BQ6ZQY2 392 aa9.64□□□□□ -0.87
CAPN3-206ENST00000397163 ZNF398Q8TD17 642 aa9.64□□□□□ -0.87
CAPN3-206ENST00000397163 CYTH2Q99418 400 aa9.64□□□□□ -0.87
CAPN3-206ENST00000397163 TUBB6Q9BUF5 446 aa9.64□□□□□ -0.87
CAPN3-206ENST00000397163 SUDS3Q9H7L9 328 aaPredicted RBP9.64□□□□□ -0.87
CAPN3-206ENST00000397163 KCNQ5Q9NR82 932 aa9.64□□□□□ -0.87
CAPN3-206ENST00000397163 ATXN10Q9UBB4 475 aa9.64□□□□□ -0.87
CAPN3-206ENST00000397163 FAM198AQ9UFP1 575 aa9.64□□□□□ -0.87
CAPN3-206ENST00000397163 MYPNQ86TC9 1320 aa9.64□□□□□ -0.87
CAPN3-206ENST00000397163 ALOX15BO15296 676 aa9.64□□□□□ -0.87
CAPN3-206ENST00000397163 TLR3O15455 904 aaKnown RBP9.64□□□□□ -0.87
CAPN3-206ENST00000397163 VIL1P09327 827 aaKnown RBP9.64□□□□□ -0.87
CAPN3-206ENST00000397163 GEMIN4P57678 1058 aaKnown RBP9.64□□□□□ -0.87
CAPN3-206ENST00000397163 PABPC1LQ4VXU2 614 aaKnown RBP9.64□□□□□ -0.87
CAPN3-206ENST00000397163 CFAP157Q5JU67 520 aa9.64□□□□□ -0.87
CAPN3-206ENST00000397163 TATDN1Q6P1N9 297 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms