RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 STX1AQ16623 288 aa11.17□□□□□ -0.62
NEDD8-202ENST00000396828 SPATA1Q5VX52 437 aa11.17□□□□□ -0.62
NEDD8-202ENST00000396828 OVOS1Q6IE37 1185 aa11.17□□□□□ -0.62
NEDD8-202ENST00000396828 DSTYKQ6XUX3 929 aa11.17□□□□□ -0.62
NEDD8-202ENST00000396828 GAREM2Q75VX8 874 aa11.17□□□□□ -0.62
NEDD8-202ENST00000396828 MFSD6LQ8IWD5 586 aa11.17□□□□□ -0.62
NEDD8-202ENST00000396828 TRIML1Q8N9V2 468 aa11.17□□□□□ -0.62
NEDD8-202ENST00000396828 OR10T2Q8NGX3 314 aa11.17□□□□□ -0.62
NEDD8-202ENST00000396828 TTC8Q8TAM2 541 aa11.17□□□□□ -0.62
NEDD8-202ENST00000396828 KCNN1Q92952 543 aa11.17□□□□□ -0.62
NEDD8-202ENST00000396828 ZFYVE19Q96K21 471 aa11.17□□□□□ -0.62
NEDD8-202ENST00000396828 SENP8Q96LD8 212 aa11.17□□□□□ -0.62
NEDD8-202ENST00000396828 GSDMAQ96QA5 445 aa11.17□□□□□ -0.62
NEDD8-202ENST00000396828 NELL2Q99435 816 aa11.17□□□□□ -0.62
NEDD8-202ENST00000396828 C7orf25Q9BPX7 421 aa11.17□□□□□ -0.62
NEDD8-202ENST00000396828 MSTO1Q9BUK6 570 aa11.17□□□□□ -0.62
NEDD8-202ENST00000396828 BLZF1Q9H2G9 400 aa11.17□□□□□ -0.62
NEDD8-202ENST00000396828 LMAN1LQ9HAT1 526 aa11.17□□□□□ -0.62
NEDD8-202ENST00000396828 TRPV4Q9HBA0 871 aa11.17□□□□□ -0.62
NEDD8-202ENST00000396828 C2orf42Q9NWW7 574 aa11.17□□□□□ -0.62
NEDD8-202ENST00000396828 ZSCAN32Q9NX65 697 aa11.17□□□□□ -0.62
NEDD8-202ENST00000396828 PCDHA5Q9Y5H7 936 aa11.17□□□□□ -0.62
NEDD8-202ENST00000396828 PIAS3Q9Y6X2 628 aa11.17□□□□□ -0.62
NEDD8-202ENST00000396828 SPTBN2O15020 2390 aa11.16□□□□□ -0.62
NEDD8-202ENST00000396828 PIRO00625 290 aa11.16□□□□□ -0.62
NEDD8-202ENST00000396828 RPN1P04843 607 aaKnown RBP11.16□□□□□ -0.62
NEDD8-202ENST00000396828 PRR29P0C7W0 189 aa11.16□□□□□ -0.62
NEDD8-202ENST00000396828 CHRNB1P11230 501 aa11.16□□□□□ -0.62
NEDD8-202ENST00000396828 WNT7BP56706 349 aa11.16□□□□□ -0.62
NEDD8-202ENST00000396828 ASIC1P78348 528 aa11.16□□□□□ -0.62
NEDD8-202ENST00000396828 GTF2BQ00403 316 aa11.16□□□□□ -0.62
NEDD8-202ENST00000396828 SATB1Q01826 763 aa11.16□□□□□ -0.62
NEDD8-202ENST00000396828 TYRO3Q06418 890 aa11.16□□□□□ -0.62
NEDD8-202ENST00000396828 DMWDQ09019 674 aa11.16□□□□□ -0.62
NEDD8-202ENST00000396828 CUL4BQ13620 913 aa11.16□□□□□ -0.62
NEDD8-202ENST00000396828 RSPO4Q2I0M5 234 aaPredicted RBP11.16□□□□□ -0.62
NEDD8-202ENST00000396828 C9orf57Q5W0N0 161 aa11.16□□□□□ -0.62
NEDD8-202ENST00000396828 CNNM4Q6P4Q7 775 aa11.16□□□□□ -0.62
NEDD8-202ENST00000396828 TXNDC11Q6PKC3 985 aa11.16□□□□□ -0.62
NEDD8-202ENST00000396828 DNAJB7Q7Z6W7 309 aaPredicted RBP11.16□□□□□ -0.62
NEDD8-202ENST00000396828 LRRTM3Q86VH5 581 aa11.16□□□□□ -0.62
NEDD8-202ENST00000396828 ARID3BQ8IVW6 561 aaPredicted RBP11.16□□□□□ -0.62
NEDD8-202ENST00000396828 ELMOD1Q8N336 334 aa11.16□□□□□ -0.62
NEDD8-202ENST00000396828 ZSWIM2Q8NEG5 633 aa11.16□□□□□ -0.62
NEDD8-202ENST00000396828 ATRIPQ8WXE1 791 aa11.16□□□□□ -0.62
NEDD8-202ENST00000396828 FAM3CQ92520 227 aa11.16□□□□□ -0.62
NEDD8-202ENST00000396828 ERCC4Q92889 916 aaPredicted RBP11.16□□□□□ -0.62
NEDD8-202ENST00000396828 IRF7Q92985 503 aa11.16□□□□□ -0.62
NEDD8-202ENST00000396828 FAM84AQ96KN4 292 aa11.16□□□□□ -0.62
NEDD8-202ENST00000396828 GTPBP4Q9BZE4 634 aaKnown RBP11.16□□□□□ -0.62
NEDD8-202ENST00000396828 TRIM9Q9C026 710 aa11.16□□□□□ -0.62
NEDD8-202ENST00000396828 CHRDQ9H2X0 955 aa11.16□□□□□ -0.62
NEDD8-202ENST00000396828 TSPY26PQ9H489 355 aa11.16□□□□□ -0.62
NEDD8-202ENST00000396828 ZHX3Q9H4I2 956 aa11.16□□□□□ -0.62
NEDD8-202ENST00000396828 RPF1Q9H9Y2 349 aaKnown RBP11.16□□□□□ -0.62
NEDD8-202ENST00000396828 PARVGQ9HBI0 331 aa11.16□□□□□ -0.62
NEDD8-202ENST00000396828 RBM12Q9NTZ6 932 aaKnown RBP11.16□□□□□ -0.62
NEDD8-202ENST00000396828 ANO10Q9NW15 660 aa11.16□□□□□ -0.62
NEDD8-202ENST00000396828 DLL3Q9NYJ7 618 aa11.16□□□□□ -0.62
NEDD8-202ENST00000396828 KCNG1Q9UIX4 513 aa11.16□□□□□ -0.62
NEDD8-202ENST00000396828 ODF2LQ9ULJ1 636 aa11.16□□□□□ -0.62
NEDD8-202ENST00000396828 MAFFQ9ULX9 164 aa11.16□□□□□ -0.62
NEDD8-202ENST00000396828 PCDHGA2Q9Y5H1 932 aa11.16□□□□□ -0.62
NEDD8-202ENST00000396828 KIF26AQ9ULI4 1882 aaPredicted RBP11.16□□□□□ -0.62
NEDD8-202ENST00000396828 PVALEFA0A1B0GWK0 134 aa11.15□□□□□ -0.62
NEDD8-202ENST00000396828 ANO9A1A5B4 782 aa11.15□□□□□ -0.62
NEDD8-202ENST00000396828 MYMKA6NI61 221 aa11.15□□□□□ -0.62
NEDD8-202ENST00000396828 SLC38A8A6NNN8 435 aa11.15□□□□□ -0.62
NEDD8-202ENST00000396828 ZNF263O14978 683 aa11.15□□□□□ -0.62
NEDD8-202ENST00000396828 NCAM2O15394 837 aa11.15□□□□□ -0.62
NEDD8-202ENST00000396828 FAM13AO94988 1023 aa11.15□□□□□ -0.62
NEDD8-202ENST00000396828 CAVIN2O95810 425 aa11.15□□□□□ -0.62
NEDD8-202ENST00000396828 ATF6P18850 670 aa11.15□□□□□ -0.62
NEDD8-202ENST00000396828 CASP1P29466 404 aa11.15□□□□□ -0.62
NEDD8-202ENST00000396828 MAGEA9P43362 315 aa11.15□□□□□ -0.62
NEDD8-202ENST00000396828 NLRP12P59046 1061 aa11.15□□□□□ -0.62
NEDD8-202ENST00000396828 KCNA1Q09470 495 aa11.15□□□□□ -0.62
NEDD8-202ENST00000396828 LPAL2Q16609 132 aa11.15□□□□□ -0.62
NEDD8-202ENST00000396828 CRELD2Q6UXH1 353 aaPredicted RBP11.15□□□□□ -0.62
NEDD8-202ENST00000396828 DYMQ7RTS9 669 aa11.15□□□□□ -0.62
NEDD8-202ENST00000396828 DGLUCYQ7Z3D6 616 aa11.15□□□□□ -0.62
NEDD8-202ENST00000396828 USP37Q86T82 979 aa11.15□□□□□ -0.62
NEDD8-202ENST00000396828 SPATA20Q8TB22 786 aa11.15□□□□□ -0.62
NEDD8-202ENST00000396828 BORCS6Q96GS4 357 aa11.15□□□□□ -0.62
NEDD8-202ENST00000396828 LPIN3Q9BQK8 851 aa11.15□□□□□ -0.62
NEDD8-202ENST00000396828 NAT10Q9H0A0 1025 aaKnown RBP11.15□□□□□ -0.62
NEDD8-202ENST00000396828 SMG9Q9H0W8 520 aaKnown RBP11.15□□□□□ -0.62
NEDD8-202ENST00000396828 EPC1Q9H2F5 836 aa11.15□□□□□ -0.62
NEDD8-202ENST00000396828 SLITRK6Q9H5Y7 841 aa11.15□□□□□ -0.62
NEDD8-202ENST00000396828 PARD6AQ9NPB6 346 aa11.15□□□□□ -0.62
NEDD8-202ENST00000396828 TRPV5Q9NQA5 729 aa11.15□□□□□ -0.62
NEDD8-202ENST00000396828 EXOC1Q9NV70 894 aa11.15□□□□□ -0.62
NEDD8-202ENST00000396828 GTSE1Q9NYZ3 720 aa11.15□□□□□ -0.62
NEDD8-202ENST00000396828 DACH1Q9UI36 760 aa11.15□□□□□ -0.62
NEDD8-202ENST00000396828 SMG5Q9UPR3 1016 aaKnown RBP11.15□□□□□ -0.62
NEDD8-202ENST00000396828 MRPS17Q9Y2R5 130 aaKnown RBP11.15□□□□□ -0.62
NEDD8-202ENST00000396828 ZFHX4Q86UP3 3567 aa11.15□□□□□ -0.62
NEDD8-202ENST00000396828 OR6C75A6NL08 312 aa11.14□□□□□ -0.63
NEDD8-202ENST00000396828 H0YCG3 227 aa11.14□□□□□ -0.63
NEDD8-202ENST00000396828 BIN1O00499 593 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms