RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 SH3D19Q5HYK7 790 aa14.05□□□□□ -0.16
TRIM40-207ENST00000396581 RNASEH2BQ5TBB1 312 aaKnown RBP14.05□□□□□ -0.16
TRIM40-207ENST00000396581 PAXIP1Q6ZW49 1069 aaPredicted RBP14.05□□□□□ -0.16
TRIM40-207ENST00000396581 RCOR2Q8IZ40 523 aa14.05□□□□□ -0.16
TRIM40-207ENST00000396581 CPXCR1Q8N123 301 aa14.05□□□□□ -0.16
TRIM40-207ENST00000396581 GPD1LQ8N335 351 aa14.05□□□□□ -0.16
TRIM40-207ENST00000396581 IL31RAQ8NI17 732 aa14.05□□□□□ -0.16
TRIM40-207ENST00000396581 ZNF75CPQ92670 426 aaPredicted RBP14.05□□□□□ -0.16
TRIM40-207ENST00000396581 DHRS4Q9BTZ2 278 aa14.05□□□□□ -0.16
TRIM40-207ENST00000396581 DENND2DQ9H6A0 471 aaPredicted RBP14.05□□□□□ -0.16
TRIM40-207ENST00000396581 RAVER2Q9HCJ3 691 aaKnown RBP14.05□□□□□ -0.16
TRIM40-207ENST00000396581 C1orf112Q9NSG2 853 aa14.05□□□□□ -0.16
TRIM40-207ENST00000396581 SHOC2Q9UQ13 582 aa14.05□□□□□ -0.16
TRIM40-207ENST00000396581 SNCAIPQ9Y6H5 919 aa14.05□□□□□ -0.16
TRIM40-207ENST00000396581 SCINQ9Y6U3 715 aa14.05□□□□□ -0.16
TRIM40-207ENST00000396581 PHIPQ8WWQ0 1821 aa14.04□□□□□ -0.16
TRIM40-207ENST00000396581 DENND3A2RUS2 1198 aa14.04□□□□□ -0.16
TRIM40-207ENST00000396581 NFIBO00712 420 aa14.04□□□□□ -0.16
TRIM40-207ENST00000396581 EPHX2P34913 555 aa14.04□□□□□ -0.16
TRIM40-207ENST00000396581 MRPS9P82933 396 aaKnown RBP14.04□□□□□ -0.16
TRIM40-207ENST00000396581 DMP1Q13316 513 aaPredicted RBP14.04□□□□□ -0.16
TRIM40-207ENST00000396581 PRKG1Q13976 671 aa14.04□□□□□ -0.16
TRIM40-207ENST00000396581 LBRQ14739 615 aaKnown RBP14.04□□□□□ -0.16
TRIM40-207ENST00000396581 FASTKD3Q14CZ7 662 aaKnown RBP14.04□□□□□ -0.16
TRIM40-207ENST00000396581 OASLQ15646 514 aaKnown RBP14.04□□□□□ -0.16
TRIM40-207ENST00000396581 GPR162Q16538 588 aa14.04□□□□□ -0.16
TRIM40-207ENST00000396581 LRRC38Q5VT99 294 aa14.04□□□□□ -0.16
TRIM40-207ENST00000396581 NLRP9Q7RTR0 991 aa14.04□□□□□ -0.16
TRIM40-207ENST00000396581 GSTA5Q7RTV2 222 aa14.04□□□□□ -0.16
TRIM40-207ENST00000396581 ABRAQ8N0Z2 381 aa14.04□□□□□ -0.16
TRIM40-207ENST00000396581 ZNF516Q92618 1163 aa14.04□□□□□ -0.16
TRIM40-207ENST00000396581 RBM41Q96IZ5 413 aaKnown RBP14.04□□□□□ -0.16
TRIM40-207ENST00000396581 PI4K2AQ9BTU6 479 aa14.04□□□□□ -0.16
TRIM40-207ENST00000396581 DCLRE1BQ9H816 532 aa14.04□□□□□ -0.16
TRIM40-207ENST00000396581 PSMC3IPQ9P2W1 217 aaPredicted RBP14.04□□□□□ -0.16
TRIM40-207ENST00000396581 DNPEPQ9ULA0 475 aa14.04□□□□□ -0.16
TRIM40-207ENST00000396581 CNTN6Q9UQ52 1028 aa14.04□□□□□ -0.16
TRIM40-207ENST00000396581 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.04□□□□□ -0.16
TRIM40-207ENST00000396581 TMEM150BA6NC51 233 aa14.03□□□□□ -0.16
TRIM40-207ENST00000396581 CBX6O95503 412 aa14.03□□□□□ -0.16
TRIM40-207ENST00000396581 KRT15P19012 456 aa14.03□□□□□ -0.16
TRIM40-207ENST00000396581 CD58P19256 250 aa14.03□□□□□ -0.16
TRIM40-207ENST00000396581 CA4P22748 312 aa14.03□□□□□ -0.16
TRIM40-207ENST00000396581 MARK3P27448 753 aa14.03□□□□□ -0.16
TRIM40-207ENST00000396581 PTDSS1P48651 473 aaKnown RBP14.03□□□□□ -0.16
TRIM40-207ENST00000396581 OAZ1P54368 228 aa14.03□□□□□ -0.16
TRIM40-207ENST00000396581 RNASELQ05823 741 aaKnown RBP14.03□□□□□ -0.16
TRIM40-207ENST00000396581 C1QBPQ07021 282 aaKnown RBP14.03□□□□□ -0.16
TRIM40-207ENST00000396581 TAF1BQ53T94 588 aaPredicted RBP14.03□□□□□ -0.16
TRIM40-207ENST00000396581 FAM102BQ5T8I3 360 aa14.03□□□□□ -0.16
TRIM40-207ENST00000396581 CATSPERGQ6ZRH7 1159 aa14.03□□□□□ -0.16
TRIM40-207ENST00000396581 CLNKQ7Z7G1 428 aa14.03□□□□□ -0.16
TRIM40-207ENST00000396581 C4orf33Q8N1A6 199 aa14.03□□□□□ -0.16
TRIM40-207ENST00000396581 REPS2Q8NFH8 660 aa14.03□□□□□ -0.16
TRIM40-207ENST00000396581 NKD2Q969F2 451 aaPredicted RBP14.03□□□□□ -0.16
TRIM40-207ENST00000396581 ELMO3Q96BJ8 720 aa14.03□□□□□ -0.16
TRIM40-207ENST00000396581 ATG4CQ96DT6 458 aa14.03□□□□□ -0.16
TRIM40-207ENST00000396581 SLITRK1Q96PX8 696 aa14.03□□□□□ -0.16
TRIM40-207ENST00000396581 SH2D3AQ9BRG2 576 aa14.03□□□□□ -0.16
TRIM40-207ENST00000396581 MAK16Q9BXY0 300 aaKnown RBP14.03□□□□□ -0.16
TRIM40-207ENST00000396581 KANSL3Q9P2N6 904 aa14.03□□□□□ -0.16
TRIM40-207ENST00000396581 ZFP69BQ9UJL9 534 aa14.03□□□□□ -0.16
TRIM40-207ENST00000396581 A0A1W2PPM1 405 aa14.03□□□□□ -0.16
TRIM40-207ENST00000396581 POC1B-GALNT4F8VUJ3 575 aa14.03□□□□□ -0.16
TRIM40-207ENST00000396581 ATP2A1O14983 1001 aa14.03□□□□□ -0.16
TRIM40-207ENST00000396581 TJP3O95049 919 aa14.03□□□□□ -0.16
TRIM40-207ENST00000396581 ATP4AP20648 1035 aa14.03□□□□□ -0.16
TRIM40-207ENST00000396581 CALRP27797 417 aaKnown RBP14.03□□□□□ -0.16
TRIM40-207ENST00000396581 CETN2P41208 172 aa14.03□□□□□ -0.16
TRIM40-207ENST00000396581 JAK3P52333 1124 aa14.03□□□□□ -0.16
TRIM40-207ENST00000396581 ZACNQ401N2 412 aa14.03□□□□□ -0.16
TRIM40-207ENST00000396581 PLEKHG4Q58EX7 1191 aa14.03□□□□□ -0.16
TRIM40-207ENST00000396581 BRDTQ58F21 947 aaPredicted RBP14.03□□□□□ -0.16
TRIM40-207ENST00000396581 C4orf50Q6ZRC1 276 aa14.03□□□□□ -0.16
TRIM40-207ENST00000396581 LMNTD2Q8IXW0 634 aa14.03□□□□□ -0.16
TRIM40-207ENST00000396581 RBBP8NLQ8NC74 664 aaPredicted RBP14.03□□□□□ -0.16
TRIM40-207ENST00000396581 FEZF2Q8TBJ5 459 aa14.03□□□□□ -0.16
TRIM40-207ENST00000396581 MZB1Q8WU39 189 aa14.03□□□□□ -0.16
TRIM40-207ENST00000396581 MIPEPQ99797 713 aa14.03□□□□□ -0.16
TRIM40-207ENST00000396581 PKD2L1Q9P0L9 805 aa14.03□□□□□ -0.16
TRIM40-207ENST00000396581 NUMBLQ9Y6R0 609 aa14.03□□□□□ -0.16
TRIM40-207ENST00000396581 SIGLEC16A6NMB1 481 aa14.02□□□□□ -0.16
TRIM40-207ENST00000396581 TLR3O15455 904 aaKnown RBP14.02□□□□□ -0.16
TRIM40-207ENST00000396581 NPTXRO95502 500 aa14.02□□□□□ -0.16
TRIM40-207ENST00000396581 C4BPAP04003 597 aaKnown RBP14.02□□□□□ -0.16
TRIM40-207ENST00000396581 ITGAVP06756 1048 aa14.02□□□□□ -0.16
TRIM40-207ENST00000396581 FESP07332 822 aa14.02□□□□□ -0.16
TRIM40-207ENST00000396581 ZSCAN5DPP0CG00 497 aa14.02□□□□□ -0.16
TRIM40-207ENST00000396581 SFNP31947 248 aa14.02□□□□□ -0.16
TRIM40-207ENST00000396581 IREB2P48200 963 aaKnown RBP14.02□□□□□ -0.16
TRIM40-207ENST00000396581 ARSEP51690 589 aa14.02□□□□□ -0.16
TRIM40-207ENST00000396581 GEMIN4P57678 1058 aaKnown RBP14.02□□□□□ -0.16
TRIM40-207ENST00000396581 GPX6P59796 221 aa14.02□□□□□ -0.16
TRIM40-207ENST00000396581 MTMR1Q13613 665 aa14.02□□□□□ -0.16
TRIM40-207ENST00000396581 WDR72Q3MJ13 1102 aa14.02□□□□□ -0.16
TRIM40-207ENST00000396581 C2CD6Q53TS8 623 aa14.02□□□□□ -0.16
TRIM40-207ENST00000396581 ZNF449Q6P9G9 518 aa14.02□□□□□ -0.16
TRIM40-207ENST00000396581 LVRNQ6Q4G3 990 aa14.02□□□□□ -0.16
TRIM40-207ENST00000396581 CENPUQ71F23 418 aa14.02□□□□□ -0.16
TRIM40-207ENST00000396581 PHLDB2Q86SQ0 1253 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms