RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 SF3B1O75533 1304 aaKnown RBP eCLIP18.75■□□□□ 0.59
TNFSF13-205ENST00000396545 LRRC53A6NM62 1247 aa18.75■□□□□ 0.59
TNFSF13-205ENST00000396545 PTGESO14684 152 aa18.75■□□□□ 0.59
TNFSF13-205ENST00000396545 SLU7O95391 586 aaKnown RBP18.75■□□□□ 0.59
TNFSF13-205ENST00000396545 PIGRP01833 764 aa18.75■□□□□ 0.59
TNFSF13-205ENST00000396545 NPR3P17342 541 aa18.75■□□□□ 0.59
TNFSF13-205ENST00000396545 KRT83P78385 493 aa18.75■□□□□ 0.59
TNFSF13-205ENST00000396545 CREMQ03060 361 aa18.75■□□□□ 0.59
TNFSF13-205ENST00000396545 ENPEPQ07075 957 aa18.75■□□□□ 0.59
TNFSF13-205ENST00000396545 TUSC3Q13454 348 aa18.75■□□□□ 0.59
TNFSF13-205ENST00000396545 SLC35C1Q96A29 364 aa18.75■□□□□ 0.59
TNFSF13-205ENST00000396545 MYADMQ96S97 322 aa18.75■□□□□ 0.59
TNFSF13-205ENST00000396545 CCDC113Q9H0I3 377 aa18.75■□□□□ 0.59
TNFSF13-205ENST00000396545 GANQ9H2C0 597 aa18.75■□□□□ 0.59
TNFSF13-205ENST00000396545 IKZF4Q9H2S9 585 aa18.75■□□□□ 0.59
TNFSF13-205ENST00000396545 PLCB1Q9NQ66 1216 aa18.75■□□□□ 0.59
TNFSF13-205ENST00000396545 ZDHHC7Q9NXF8 308 aa18.75■□□□□ 0.59
TNFSF13-205ENST00000396545 K7ERI5 159 aa18.74■□□□□ 0.59
TNFSF13-205ENST00000396545 KIF5CO60282 957 aa18.74■□□□□ 0.59
TNFSF13-205ENST00000396545 EXOC3O60645 756 aa18.74■□□□□ 0.59
TNFSF13-205ENST00000396545 TADA2AO75478 443 aa18.74■□□□□ 0.59
TNFSF13-205ENST00000396545 RPL17P18621 184 aaKnown RBP18.74■□□□□ 0.59
TNFSF13-205ENST00000396545 GARTP22102 1010 aa18.74■□□□□ 0.59
TNFSF13-205ENST00000396545 GBP2P32456 591 aaPredicted RBP18.74■□□□□ 0.59
TNFSF13-205ENST00000396545 ARHGAP29Q52LW3 1261 aa18.74■□□□□ 0.59
TNFSF13-205ENST00000396545 RTP2Q5QGT7 225 aa18.74■□□□□ 0.59
TNFSF13-205ENST00000396545 SLFN12LQ6IEE8 588 aa18.74■□□□□ 0.59
TNFSF13-205ENST00000396545 RRAGAQ7L523 313 aa18.74■□□□□ 0.59
TNFSF13-205ENST00000396545 FAM186BQ8IYM0 893 aa18.74■□□□□ 0.59
TNFSF13-205ENST00000396545 XXYLT1Q8NBI6 393 aa18.74■□□□□ 0.59
TNFSF13-205ENST00000396545 FLCNQ8NFG4 579 aa18.74■□□□□ 0.59
TNFSF13-205ENST00000396545 HAUS4Q9H6D7 363 aa18.74■□□□□ 0.59
TNFSF13-205ENST00000396545 ARHGAP20Q9P2F6 1191 aa18.74■□□□□ 0.59
TNFSF13-205ENST00000396545 SPTBN4Q9H254 2564 aa18.74■□□□□ 0.59
TNFSF13-205ENST00000396545 GTPBP10A4D1E9 387 aaKnown RBP18.73■□□□□ 0.59
TNFSF13-205ENST00000396545 NARSO43776 548 aaKnown RBP18.73■□□□□ 0.59
TNFSF13-205ENST00000396545 RECQL4O94761 1208 aa18.73■□□□□ 0.59
TNFSF13-205ENST00000396545 KIF4AO95239 1232 aa18.73■□□□□ 0.59
TNFSF13-205ENST00000396545 LCA5LO95447 670 aa18.73■□□□□ 0.59
TNFSF13-205ENST00000396545 EDN1P05305 212 aa18.73■□□□□ 0.59
TNFSF13-205ENST00000396545 PRKCBP05771 671 aa18.73■□□□□ 0.59
TNFSF13-205ENST00000396545 AOC1P19801 751 aa18.73■□□□□ 0.59
TNFSF13-205ENST00000396545 NBL1P41271 181 aa18.73■□□□□ 0.59
TNFSF13-205ENST00000396545 MAPK8IP2Q13387 824 aaPredicted RBP18.73■□□□□ 0.59
TNFSF13-205ENST00000396545 PRPF4BQ13523 1007 aaKnown RBP18.73■□□□□ 0.59
TNFSF13-205ENST00000396545 NAB2Q15742 525 aa18.73■□□□□ 0.59
TNFSF13-205ENST00000396545 MAPK6Q16659 721 aa18.73■□□□□ 0.59
TNFSF13-205ENST00000396545 PRSS55Q6UWB4 352 aaPredicted RBP18.73■□□□□ 0.59
TNFSF13-205ENST00000396545 CACNA2D4Q7Z3S7 1137 aa18.73■□□□□ 0.59
TNFSF13-205ENST00000396545 GLYCTKQ8IVS8 523 aa18.73■□□□□ 0.59
TNFSF13-205ENST00000396545 SIX5Q8N196 739 aa18.73■□□□□ 0.59
TNFSF13-205ENST00000396545 RSAD2Q8WXG1 361 aa18.73■□□□□ 0.59
TNFSF13-205ENST00000396545 TSC1Q92574 1164 aa18.73■□□□□ 0.59
TNFSF13-205ENST00000396545 IRX2Q9BZI1 471 aaPredicted RBP18.73■□□□□ 0.59
TNFSF13-205ENST00000396545 PRKD2Q9BZL6 878 aa18.73■□□□□ 0.59
TNFSF13-205ENST00000396545 CXCL16Q9H2A7 254 aa18.73■□□□□ 0.59
TNFSF13-205ENST00000396545 KIAA1586Q9HCI6 787 aa18.73■□□□□ 0.59
TNFSF13-205ENST00000396545 SNTG2Q9NY99 539 aa18.73■□□□□ 0.59
TNFSF13-205ENST00000396545 FBXL21Q9UKT6 434 aa18.73■□□□□ 0.59
TNFSF13-205ENST00000396545 FAM186AA6NE01 2351 aa18.73■□□□□ 0.59
TNFSF13-205ENST00000396545 CASTOR2A6NHX0 329 aa18.72■□□□□ 0.59
TNFSF13-205ENST00000396545 ACKR2O00590 384 aa18.72■□□□□ 0.59
TNFSF13-205ENST00000396545 PI15O43692 258 aa18.72■□□□□ 0.59
TNFSF13-205ENST00000396545 MCCD1P59942 119 aaPredicted RBP18.72■□□□□ 0.59
TNFSF13-205ENST00000396545 INTS8Q75QN2 995 aaKnown RBP18.72■□□□□ 0.59
TNFSF13-205ENST00000396545 USP37Q86T82 979 aa18.72■□□□□ 0.59
TNFSF13-205ENST00000396545 HASPINQ8TF76 798 aa18.72■□□□□ 0.59
TNFSF13-205ENST00000396545 USP20Q9Y2K6 914 aa18.72■□□□□ 0.59
TNFSF13-205ENST00000396545 SSU72P8A0A1W2PR75 194 aa18.72■□□□□ 0.59
TNFSF13-205ENST00000396545 HNRNPDLO14979 420 aaKnown RBP18.72■□□□□ 0.59
TNFSF13-205ENST00000396545 ZMYND10O75800 440 aa18.72■□□□□ 0.59
TNFSF13-205ENST00000396545 URI1O94763 535 aaPredicted RBP18.72■□□□□ 0.59
TNFSF13-205ENST00000396545 ABL1P00519 1130 aa18.72■□□□□ 0.59
TNFSF13-205ENST00000396545 THP07101 528 aa18.72■□□□□ 0.59
TNFSF13-205ENST00000396545 KRT13P13646 458 aa18.72■□□□□ 0.59
TNFSF13-205ENST00000396545 ASTE1Q2TB18 679 aaPredicted RBP18.72■□□□□ 0.59
TNFSF13-205ENST00000396545 ZPBP2Q6X784 338 aa18.72■□□□□ 0.59
TNFSF13-205ENST00000396545 PIK3R5Q8WYR1 880 aa18.72■□□□□ 0.59
TNFSF13-205ENST00000396545 ANKRD7Q92527 254 aa18.72■□□□□ 0.59
TNFSF13-205ENST00000396545 NXPE3Q969Y0 559 aa18.72■□□□□ 0.59
TNFSF13-205ENST00000396545 BICD1Q96G01 975 aa18.72■□□□□ 0.59
TNFSF13-205ENST00000396545 CCDC42Q96M95 316 aa18.72■□□□□ 0.59
TNFSF13-205ENST00000396545 CLSTN3Q9BQT9 956 aa18.72■□□□□ 0.59
TNFSF13-205ENST00000396545 TTPALQ9BTX7 342 aa18.72■□□□□ 0.59
TNFSF13-205ENST00000396545 KIFC3Q9BVG8 833 aa18.72■□□□□ 0.59
TNFSF13-205ENST00000396545 PIDD1Q9HB75 910 aa18.72■□□□□ 0.59
TNFSF13-205ENST00000396545 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.72■□□□□ 0.59
TNFSF13-205ENST00000396545 HSPBP1Q9NZL4 362 aa18.72■□□□□ 0.59
TNFSF13-205ENST00000396545 WNT16Q9UBV4 365 aa18.72■□□□□ 0.59
TNFSF13-205ENST00000396545 FBXL5Q9UKA1 691 aa18.72■□□□□ 0.59
TNFSF13-205ENST00000396545 FBXW11Q9UKB1 542 aa18.72■□□□□ 0.59
TNFSF13-205ENST00000396545 STYXL1Q9Y6J8 313 aa18.72■□□□□ 0.59
TNFSF13-205ENST00000396545 GVINP1Q7Z2Y8 2422 aa18.71■□□□□ 0.59
TNFSF13-205ENST00000396545 LAMP2P13473 410 aa18.71■□□□□ 0.59
TNFSF13-205ENST00000396545 LIG4P49917 911 aa18.71■□□□□ 0.59
TNFSF13-205ENST00000396545 CYP2J2P51589 502 aa18.71■□□□□ 0.59
TNFSF13-205ENST00000396545 POLR2FP61218 127 aaKnown RBP18.71■□□□□ 0.59
TNFSF13-205ENST00000396545 TMEM132AQ24JP5 1023 aa18.71■□□□□ 0.59
TNFSF13-205ENST00000396545 DCAF17Q5H9S7 520 aaPredicted RBP18.71■□□□□ 0.59
TNFSF13-205ENST00000396545 FAM171A1Q5VUB5 890 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms