RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 GYS2P54840 703 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 PTK7Q13308 1070 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 TMA16Q96EY4 203 aaKnown RBP5.69□□□□□ -1.5
VPS13C-204ENST00000395898 ELP3Q9H9T3 547 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 ZNF263O14978 683 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 ALDH18A1P54886 795 aaKnown RBP5.69□□□□□ -1.5
VPS13C-204ENST00000395898 PPP4CP60510 307 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 LRRC74AQ0VAA2 488 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 MGAT5BQ3V5L5 792 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 ARHGAP15Q53QZ3 475 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 STOX1Q6ZVD7 989 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 KDELC2Q7Z4H8 507 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 FBXO33Q7Z6M2 555 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 ISCUQ9H1K1 167 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 ZNF70Q9UC06 446 aaPredicted RBP5.69□□□□□ -1.5
VPS13C-204ENST00000395898 KCNQ2O43526 872 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 AKAP10O43572 662 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 ZC3H11AO75152 810 aaKnown RBP eCLIP5.69□□□□□ -1.5
VPS13C-204ENST00000395898 PTGER2P43116 358 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 ANXA11P50995 505 aaKnown RBP5.69□□□□□ -1.5
VPS13C-204ENST00000395898 GEMIN4P57678 1058 aaKnown RBP5.69□□□□□ -1.5
VPS13C-204ENST00000395898 CCDC85BQ15834 202 aaPredicted RBP5.69□□□□□ -1.5
VPS13C-204ENST00000395898 BOLA3Q53S33 107 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 RABGAP1LQ5R372 815 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 CCT8L2Q96SF2 557 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 NDEL1Q9GZM8 345 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 DCDC2Q9UHG0 476 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 TRAF3IP3Q9Y228 551 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 SPATA31A1Q5TZJ5 1347 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 SPDYE5A6NIY4 337 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 RSPH10B2B2RC85 870 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 RSPH10BP0C881 870 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 CNTFP26441 200 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 SKOR1P84550 965 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 NKX1-1Q15270 411 aaPredicted RBP5.69□□□□□ -1.5
VPS13C-204ENST00000395898 SPDYE7PQ495Y7 208 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 GNASQ5JWF2 1037 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 ATP6V0D2Q8N8Y2 350 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 B4GALNT2Q8NHY0 566 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 ARL8AQ96BM9 186 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 ADNPQ9H2P0 1102 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 JMJD4Q9H9V9 463 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 CD274Q9NZQ7 290 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 ALG6Q9Y672 507 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 SLIT1O75093 1534 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 MYO5BQ9ULV0 1848 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 MYH8P13535 1937 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 GPR75-ASB3A0A0A6YYF3 556 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 CAMTA2O94983 1202 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 ICAM1P05362 532 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 CHN1P15882 459 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 PSMA3P25788 255 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 CHRNA5P30532 468 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 PPP3CCP48454 512 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 NCALDP61601 193 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 HPCAP84074 193 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 EN1Q05925 392 aaPredicted RBP5.69□□□□□ -1.5
VPS13C-204ENST00000395898 MTF1Q14872 753 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 GPAT2Q6NUI2 795 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 TRPM8Q7Z2W7 1104 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 C3orf20Q8ND61 904 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 CCDC134Q9H6E4 229 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 KLHL11Q9NVR0 708 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 TMEM51Q9NW97 253 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.69□□□□□ -1.5
VPS13C-204ENST00000395898 RBP3P10745 1247 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 CSTF3Q12996 717 aaKnown RBP5.69□□□□□ -1.5
VPS13C-204ENST00000395898 E2F4Q16254 413 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 LONRF1Q17RB8 773 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 ANGEL2Q5VTE6 544 aaKnown RBP5.69□□□□□ -1.5
VPS13C-204ENST00000395898 BARGINQ6ZT62 677 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.69□□□□□ -1.5
VPS13C-204ENST00000395898 OTULINQ96BN8 352 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 PPP1R36Q96LQ0 422 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 DSEQ9UL01 958 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 GYPCP04921 128 aa5.68□□□□□ -1.5
VPS13C-204ENST00000395898 LSP1P33241 339 aa5.68□□□□□ -1.5
VPS13C-204ENST00000395898 GUCY1A3Q02108 690 aa5.68□□□□□ -1.5
VPS13C-204ENST00000395898 ILF2Q12905 390 aaKnown RBP5.68□□□□□ -1.5
VPS13C-204ENST00000395898 STK4Q13043 487 aa5.68□□□□□ -1.5
VPS13C-204ENST00000395898 C6orf10Q5SRN2 563 aa5.68□□□□□ -1.5
VPS13C-204ENST00000395898 CCNI2Q6ZMN8 369 aaPredicted RBP5.68□□□□□ -1.5
VPS13C-204ENST00000395898 USP38Q8NB14 1042 aa5.68□□□□□ -1.5
VPS13C-204ENST00000395898 DTX3LQ8TDB6 740 aa5.68□□□□□ -1.5
VPS13C-204ENST00000395898 GLT1D1Q96MS3 346 aa5.68□□□□□ -1.5
VPS13C-204ENST00000395898 BRD8Q9H0E9 1235 aa5.68□□□□□ -1.5
VPS13C-204ENST00000395898 DEFB129Q9H1M3 183 aa5.68□□□□□ -1.5
VPS13C-204ENST00000395898 KRCC1Q9NPI7 259 aaPredicted RBP5.68□□□□□ -1.5
VPS13C-204ENST00000395898 DIP2BQ9P265 1576 aa5.68□□□□□ -1.5
VPS13C-204ENST00000395898 DYNC1LI2O43237 492 aaPredicted RBP5.68□□□□□ -1.5
VPS13C-204ENST00000395898 STAG3L1P0CL83 205 aa5.68□□□□□ -1.5
VPS13C-204ENST00000395898 ENO3P13929 434 aaPredicted RBP5.68□□□□□ -1.5
VPS13C-204ENST00000395898 FNTAP49354 379 aa5.68□□□□□ -1.5
VPS13C-204ENST00000395898 PPP4R4Q6NUP7 873 aa5.68□□□□□ -1.5
VPS13C-204ENST00000395898 ZNF467Q7Z7K2 595 aaPredicted RBP5.68□□□□□ -1.5
VPS13C-204ENST00000395898 HS6ST3Q8IZP7 471 aa5.68□□□□□ -1.5
VPS13C-204ENST00000395898 HPS3Q969F9 1004 aa5.68□□□□□ -1.5
VPS13C-204ENST00000395898 WDR24Q96S15 920 aa5.68□□□□□ -1.5
VPS13C-204ENST00000395898 THTPAQ9BU02 230 aa5.68□□□□□ -1.5
VPS13C-204ENST00000395898 ZNF518BQ9C0D4 1074 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms